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The map label for this gene is dadA [H]

Identifier: 190894993

GI number: 190894993

Start: 712237

End: 713505

Strand: Reverse

Name: dadA [H]

Synonym: RHECIAT_PC0000659

Alternate gene names: 190894993

Gene position: 713505-712237 (Counterclockwise)

Preceding gene: 190894994

Following gene: 190894992

Centisome position: 65.37

GC content: 63.44

Gene sequence:

>1269_bases
ATGAAAGTCATCGTTCTGGGGGCCGGCATCGTCGGCGTCACATCCGCCTATCAGCTGGCCAAATCAGGTCATGAGGTTAC
CGTCGTCGACCGGCAATCGGGGCCGGCGCTGGAGACGAGCTTTGCCAATGCCGGCGAGGTCTCCTTCGGTTATTGCTCGC
CCTGGGCAGCCCCCGGCATTCCTGCCAAGGCCATGAAATGGCTGTTCATGAAACATGCGCCGCTCATCCTGCGCCCGAAA
CTCGACATGGCCATGCTTGCCTGGATGACAAGGATGCTGTCGAACTGCACCTCGGAGCGTTACGCGATCAACAAGAGCCG
CATGCTGCGCCTTGCCGATTACAGTCGCATCGCGCTCGCCGAGCTTCGCGCCGAAACCGGGATTGCCTATGACGAACGCA
TGCAGGGAACGCTGCAGCTGTTCCGAACGCAGCAGCAGCTCGATGCCTCGGCGAAAGATGTCAAGGCGCTGGCGGCGGAC
GGCATTCCCTATGAGGTGCTGGACCAGGACGGCTGCATCCGCGTCGAACCGGCGCTGAGGCACGTGCGCGAAAAGATCGT
CGGCGGTCTGCTGACGCCGAAGGACGAGACCGGCGACTGTTTCAAATTCACCAATGCGCTCGCCGCCCAAGCCGAAGCGC
TCGGCGTCCGCTTCGCCTATGGCACGACGATCAAGGCGCTGGACGTCGAAGCCGGCCGCGTGCGCGGGGTCGTCACTGAT
CGCGATCCCGATCGCGAGCGCCAGCGGATGAGGGCAGAGGCCGTGGTGGTTGCGCTCGGCAGCTATTCGCCGCTGCTGCT
CAAGCCGTTCGGGATCCGCCTGCCGGTCTACCCGGTCAAGGGCTATTCGCTGACCATCCCGATCACCGATGCCTCCCGTG
CGCCGGAATCGACCGTCATGGACGAAACCTACAAGATCGCCATCACCCGGCTCGGCGACCGCATCCGCGTCGGCGGCATG
GCCGAAATATCAGGTTATACCAACGATCTCGGCCTCGCCCGCCGCAGCACGCTGGAGCATTCGGTCACCGATCTCTTCCC
CGGCGGCGATGTGTCGAAGGCCTCTTTCTGGTCAGGCCTGCGTCCGATGACGCCCGACGGTACGCCGGTCATCGGCCCAA
CCAAGATCGCCGGCCTTTTCCTCAATACCGGGCATGGCACCCTTGGCTGGACGATGAGCACCGGCTCGGCCCGGCTCATT
GCTGATCTTGTCAGCGGCGCCAAGCCGGAAATCAATGCAAAGGACCTTGCCATCAGCCGTTACACCTGA

Upstream 100 bases:

>100_bases
CGCTGCCGGAACGATATCTTACGAAATCCTAACTGGTCTGGGCGATCGTTACGACAGGCAATATTGCTGAGAGCCGGCCG
GCATTGTTCTTGAGGAAATC

Downstream 100 bases:

>100_bases
AATCTCACGAGGTGACGTGAAACAGAAAGGTGGTTATCTGTAGGAATTGGTTATTATCCAAGGGAATTTTCGATATCCTA
TATGACCCTTTATTCGCATA

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MKVIVLGAGIVGVTSAYQLAKSGHEVTVVDRQSGPALETSFANAGEVSFGYCSPWAAPGIPAKAMKWLFMKHAPLILRPK
LDMAMLAWMTRMLSNCTSERYAINKSRMLRLADYSRIALAELRAETGIAYDERMQGTLQLFRTQQQLDASAKDVKALAAD
GIPYEVLDQDGCIRVEPALRHVREKIVGGLLTPKDETGDCFKFTNALAAQAEALGVRFAYGTTIKALDVEAGRVRGVVTD
RDPDRERQRMRAEAVVVALGSYSPLLLKPFGIRLPVYPVKGYSLTIPITDASRAPESTVMDETYKIAITRLGDRIRVGGM
AEISGYTNDLGLARRSTLEHSVTDLFPGGDVSKASFWSGLRPMTPDGTPVIGPTKIAGLFLNTGHGTLGWTMSTGSARLI
ADLVSGAKPEINAKDLAISRYT

Sequences:

>Translated_422_residues
MKVIVLGAGIVGVTSAYQLAKSGHEVTVVDRQSGPALETSFANAGEVSFGYCSPWAAPGIPAKAMKWLFMKHAPLILRPK
LDMAMLAWMTRMLSNCTSERYAINKSRMLRLADYSRIALAELRAETGIAYDERMQGTLQLFRTQQQLDASAKDVKALAAD
GIPYEVLDQDGCIRVEPALRHVREKIVGGLLTPKDETGDCFKFTNALAAQAEALGVRFAYGTTIKALDVEAGRVRGVVTD
RDPDRERQRMRAEAVVVALGSYSPLLLKPFGIRLPVYPVKGYSLTIPITDASRAPESTVMDETYKIAITRLGDRIRVGGM
AEISGYTNDLGLARRSTLEHSVTDLFPGGDVSKASFWSGLRPMTPDGTPVIGPTKIAGLFLNTGHGTLGWTMSTGSARLI
ADLVSGAKPEINAKDLAISRYT
>Mature_422_residues
MKVIVLGAGIVGVTSAYQLAKSGHEVTVVDRQSGPALETSFANAGEVSFGYCSPWAAPGIPAKAMKWLFMKHAPLILRPK
LDMAMLAWMTRMLSNCTSERYAINKSRMLRLADYSRIALAELRAETGIAYDERMQGTLQLFRTQQQLDASAKDVKALAAD
GIPYEVLDQDGCIRVEPALRHVREKIVGGLLTPKDETGDCFKFTNALAAQAEALGVRFAYGTTIKALDVEAGRVRGVVTD
RDPDRERQRMRAEAVVVALGSYSPLLLKPFGIRLPVYPVKGYSLTIPITDASRAPESTVMDETYKIAITRLGDRIRVGGM
AEISGYTNDLGLARRSTLEHSVTDLFPGGDVSKASFWSGLRPMTPDGTPVIGPTKIAGLFLNTGHGTLGWTMSTGSARLI
ADLVSGAKPEINAKDLAISRYT

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=423, Percent_Identity=53.4278959810875, Blast_Score=457, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45698; Mature: 45698

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIVLGAGIVGVTSAYQLAKSGHEVTVVDRQSGPALETSFANAGEVSFGYCSPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCEECCCCCCCCCCC
PAKAMKWLFMKHAPLILRPKLDMAMLAWMTRMLSNCTSERYAINKSRMLRLADYSRIALA
CHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHEECCHHHEEEECCCCHHHHH
ELRAETGIAYDERMQGTLQLFRTQQQLDASAKDVKALAADGIPYEVLDQDGCIRVEPALR
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCEEECHHHH
HVREKIVGGLLTPKDETGDCFKFTNALAAQAEALGVRFAYGTTIKALDVEAGRVRGVVTD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCEEEEECC
RDPDRERQRMRAEAVVVALGSYSPLLLKPFGIRLPVYPVKGYSLTIPITDASRAPESTVM
CCCCHHHHHHHHHEEEEEECCCCCEEECCCCCEEEEEEECCEEEEEEECCCCCCCCCHHC
DETYKIAITRLGDRIRVGGMAEISGYTNDLGLARRSTLEHSVTDLFPGGDVSKASFWSGL
CCCEEEEEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
RPMTPDGTPVIGPTKIAGLFLNTGHGTLGWTMSTGSARLIADLVSGAKPEINAKDLAISR
CCCCCCCCCCCCCHHEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHEEEEC
YT
CC
>Mature Secondary Structure
MKVIVLGAGIVGVTSAYQLAKSGHEVTVVDRQSGPALETSFANAGEVSFGYCSPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCEECCCCCCCCCCC
PAKAMKWLFMKHAPLILRPKLDMAMLAWMTRMLSNCTSERYAINKSRMLRLADYSRIALA
CHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCHHHEECCHHHEEEECCCCHHHHH
ELRAETGIAYDERMQGTLQLFRTQQQLDASAKDVKALAADGIPYEVLDQDGCIRVEPALR
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCEEECHHHH
HVREKIVGGLLTPKDETGDCFKFTNALAAQAEALGVRFAYGTTIKALDVEAGRVRGVVTD
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCEEEEEECCCCCEEEEECC
RDPDRERQRMRAEAVVVALGSYSPLLLKPFGIRLPVYPVKGYSLTIPITDASRAPESTVM
CCCCHHHHHHHHHEEEEEECCCCCEEECCCCCEEEEEEECCEEEEEEECCCCCCCCCHHC
DETYKIAITRLGDRIRVGGMAEISGYTNDLGLARRSTLEHSVTDLFPGGDVSKASFWSGL
CCCEEEEEEECCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
RPMTPDGTPVIGPTKIAGLFLNTGHGTLGWTMSTGSARLIADLVSGAKPEINAKDLAISR
CCCCCCCCCCCCCHHEEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHEEEEC
YT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10792736 [H]