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The map label for this gene is 190894981

Identifier: 190894981

GI number: 190894981

Start: 700445

End: 701479

Strand: Reverse

Name: 190894981

Synonym: RHECIAT_PC0000647

Alternate gene names: NA

Gene position: 701479-700445 (Counterclockwise)

Preceding gene: 190894982

Following gene: 190894980

Centisome position: 64.27

GC content: 60.29

Gene sequence:

>1035_bases
ATGCGATTCAAGAAGGTCCTGTCCGTCGTCGATTGTCATGCGGAAGGCGAGAGCGGCAAGGTGATCGTCGGCGGTGTCGG
CCAGGTCAAGGGCGAGACCATGTTCGACAAGCGGAGCTATCTCGAAACCCACATGGACGATATCCGCAAGATGGTTCTCT
TCGAACCGCGCGGCGCCGTCTGGCACAATGCCAACATCGTTCTGCCCTCCAATCATCCGGAAGCCGATTTCGGCTATGTG
ATCCTGGAGACGACGGAATATCCTGTTATGTCGGGTTCGAACACCATGTGCGTGGCGACCGTCCTGCTTGAAACCGGCAT
TCTTCCGATGCAGGAGCCGGTGACGAACCTGACGCTGGAATCGCCGGCCGGCCTCATTCGGGTTCGCTGTGAATGTTTAG
ACGGCAAGGTGACGAGTGTCCGGCTCGTGAACCAGCCGGCCTTCTGCTACCATCTCGGCAGCCATATCGAAGTCGAAGGT
CTCGGCACGGTTGAGGTCGACATCGTCTATGGCGGCATGACTTACACGATGGTCGATGCCGCCGCTCTCGGTTTTTCGAT
CGATCCCTCCGAGGCCCGCGACCTTTGCGAGATCGGGCAGAAGCTCAAATTCGCCGCCGCCGAACAGCTTGCCGTGGAGC
ATCCCGACAACCCCGCGATCCCCGGCATTACCAACACCCAATTCATGGGACCGCTGCGCCGCGAAAGCGGCCGGCTGATT
TCGAAGAATTGCGTCGTCGTCTCGCCCGGCCGCTGCGATCGCTCGCCCTGCGGCACCGGCTCGTCGGCCCGTCTTGCCCT
GTTGCATGCCAAGGGCCTGATCGCGCCTGGCGAAACTCTCATCCATGAATCCATCACCGGAAGCCGCTTCACCTGCGCCA
TCGACGGGCTGGCGAAGGTCGGAAGATACGATGCCGTCATCCCGGCAATCGCAGGACAGGCGTGGATCACCGGTTTCTAT
CAGATGGGCATGGATCCGACCGATCCCTATCAACAAGGATTCACCGTGGCGGATACCTGGATGACGACGGTCTGA

Upstream 100 bases:

>100_bases
TCAACTGGTAGGATTTTTCACGTCGATACCGGGGTCGGCCGGAGGCAGGCCGGTCCCGAACATACTCATGGTTCCCAGGA
AAGACCCGGAGACTCAAGCG

Downstream 100 bases:

>100_bases
AGCCTAGAGAATGGATATGAGCGGAAACAAAATTCCTTTGGTGGTCGTCGGCGCGGGTATCATCGGCGTCGTCATTGCCT
ATGAGCTCCAGCGTCGCGGC

Product: putative proline racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MRFKKVLSVVDCHAEGESGKVIVGGVGQVKGETMFDKRSYLETHMDDIRKMVLFEPRGAVWHNANIVLPSNHPEADFGYV
ILETTEYPVMSGSNTMCVATVLLETGILPMQEPVTNLTLESPAGLIRVRCECLDGKVTSVRLVNQPAFCYHLGSHIEVEG
LGTVEVDIVYGGMTYTMVDAAALGFSIDPSEARDLCEIGQKLKFAAAEQLAVEHPDNPAIPGITNTQFMGPLRRESGRLI
SKNCVVVSPGRCDRSPCGTGSSARLALLHAKGLIAPGETLIHESITGSRFTCAIDGLAKVGRYDAVIPAIAGQAWITGFY
QMGMDPTDPYQQGFTVADTWMTTV

Sequences:

>Translated_344_residues
MRFKKVLSVVDCHAEGESGKVIVGGVGQVKGETMFDKRSYLETHMDDIRKMVLFEPRGAVWHNANIVLPSNHPEADFGYV
ILETTEYPVMSGSNTMCVATVLLETGILPMQEPVTNLTLESPAGLIRVRCECLDGKVTSVRLVNQPAFCYHLGSHIEVEG
LGTVEVDIVYGGMTYTMVDAAALGFSIDPSEARDLCEIGQKLKFAAAEQLAVEHPDNPAIPGITNTQFMGPLRRESGRLI
SKNCVVVSPGRCDRSPCGTGSSARLALLHAKGLIAPGETLIHESITGSRFTCAIDGLAKVGRYDAVIPAIAGQAWITGFY
QMGMDPTDPYQQGFTVADTWMTTV
>Mature_344_residues
MRFKKVLSVVDCHAEGESGKVIVGGVGQVKGETMFDKRSYLETHMDDIRKMVLFEPRGAVWHNANIVLPSNHPEADFGYV
ILETTEYPVMSGSNTMCVATVLLETGILPMQEPVTNLTLESPAGLIRVRCECLDGKVTSVRLVNQPAFCYHLGSHIEVEG
LGTVEVDIVYGGMTYTMVDAAALGFSIDPSEARDLCEIGQKLKFAAAEQLAVEHPDNPAIPGITNTQFMGPLRRESGRLI
SKNCVVVSPGRCDRSPCGTGSSARLALLHAKGLIAPGETLIHESITGSRFTCAIDGLAKVGRYDAVIPAIAGQAWITGFY
QMGMDPTDPYQQGFTVADTWMTTV

Specific function: Unknown

COG id: COG3938

COG function: function code E; Proline racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proline racemase family [H]

Homologues:

Organism=Homo sapiens, GI21389361, Length=334, Percent_Identity=32.6347305389222, Blast_Score=171, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008794 [H]

Pfam domain/function: PF05544 Pro_racemase [H]

EC number: NA

Molecular weight: Translated: 37155; Mature: 37155

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKKVLSVVDCHAEGESGKVIVGGVGQVKGETMFDKRSYLETHMDDIRKMVLFEPRGAV
CCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCE
WHNANIVLPSNHPEADFGYVILETTEYPVMSGSNTMCVATVLLETGILPMQEPVTNLTLE
EECCEEEECCCCCCCCCCEEEEEECCCCEECCCCCEEHHHHHHHHCCCCCCCCCCCEEEC
SPAGLIRVRCECLDGKVTSVRLVNQPAFCYHLGSHIEVEGLGTVEVDIVYGGMTYTMVDA
CCCCEEEEEEEECCCCEEEEEEECCCEEEEECCCEEEEEECCEEEEEEEECCEEEEEHHH
AALGFSIDPSEARDLCEIGQKLKFAAAEQLAVEHPDNPAIPGITNTQFMGPLRRESGRLI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHCCCHHHCCCCEE
SKNCVVVSPGRCDRSPCGTGSSARLALLHAKGLIAPGETLIHESITGSRFTCAIDGLAKV
ECCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEEHHHHHC
GRYDAVIPAIAGQAWITGFYQMGMDPTDPYQQGFTVADTWMTTV
CCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCEEEHHEEECC
>Mature Secondary Structure
MRFKKVLSVVDCHAEGESGKVIVGGVGQVKGETMFDKRSYLETHMDDIRKMVLFEPRGAV
CCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCE
WHNANIVLPSNHPEADFGYVILETTEYPVMSGSNTMCVATVLLETGILPMQEPVTNLTLE
EECCEEEECCCCCCCCCCEEEEEECCCCEECCCCCEEHHHHHHHHCCCCCCCCCCCEEEC
SPAGLIRVRCECLDGKVTSVRLVNQPAFCYHLGSHIEVEGLGTVEVDIVYGGMTYTMVDA
CCCCEEEEEEEECCCCEEEEEEECCCEEEEECCCEEEEEECCEEEEEEEECCEEEEEHHH
AALGFSIDPSEARDLCEIGQKLKFAAAEQLAVEHPDNPAIPGITNTQFMGPLRRESGRLI
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHCCCHHHCCCCEE
SKNCVVVSPGRCDRSPCGTGSSARLALLHAKGLIAPGETLIHESITGSRFTCAIDGLAKV
ECCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCEEEEEEHHHHHC
GRYDAVIPAIAGQAWITGFYQMGMDPTDPYQQGFTVADTWMTTV
CCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCEEEHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]