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The map label for this gene is dadA1 [H]

Identifier: 190894980

GI number: 190894980

Start: 699178

End: 700434

Strand: Reverse

Name: dadA1 [H]

Synonym: RHECIAT_PC0000646

Alternate gene names: 190894980

Gene position: 700434-699178 (Counterclockwise)

Preceding gene: 190894981

Following gene: 190894979

Centisome position: 64.17

GC content: 66.03

Gene sequence:

>1257_bases
ATGGATATGAGCGGAAACAAAATTCCTTTGGTGGTCGTCGGCGCGGGTATCATCGGCGTCGTCATTGCCTATGAGCTCCA
GCGTCGCGGCCAGACCGTCGTGCTGGTGGACAGGGCGGCCCCCGGCATGGGCGCCTCCTACGGCAACATGGCGAGCATCG
CGGTTACCGAATTCATGCCGGCTTCGCGCCCCGGCATCTGGGCGCAGATGCCGAAATGGCTGCTCGACCCGGAAGGGCCG
GTTCGCATCCGGCCCGGCTACCTACCGAAACTGGTGCCGTGGTTCCTGAGATTCCTCGCCGCCAGCCGCCCCTCAAAATT
GAGGGAGCTGGAGGCGGCCGGCGCCGTGCTCTGCGGCCGCGTCTATGAAGACCTTGACGCGCTGCTCAAGGAGACCGGTC
TTGCGCATATGCTGACGGCCGAGGGGTGCCTCAGCCTCTATACTGATGACGCCGAATTCAGGGCGGATCGCGAGCATATC
GACATCCTCGAGCGTTTCGGCTTCCGGCACGAAATCCTCGGCGGCAACGCCATCCGGGATCTCGAGCCGGCCTTGACGAC
GAAGATCGGCAAGGCGGTGCTCTTTCCCGACAATCGGTCGATCACCGATCCGTACAAGCTCGTCGCCGCCCTCACCGAAA
AATTCCAGGCGCTCGGCGGGCGGATCGTCGAGGCAGACGTCGCAGGCTTCGAGCAGAGCGAGGCCGGCGTCTCCGCTCTC
CGCCTGGCGGATGGGCGCACGTTGGCGGCGGAGAAGGTGGTGCTTGCGGCCGGCGCCTTCACCGCCCGGCTTTCCGCCCT
GCTGCGGGAGCCCATCCCGCTTGAAACCGAACGCGGCTACCACACGCAGATCATGGAGCCCGGCATTTCGATGCGCCACT
CGATCATCTGGCCGGCGCGCGCCTTCATGGTCACGCCGACGGCAGGCGGCATCCGCGTCGGCGGCACGGTCGAAATGGCC
GGCCTCGACGCGCCGCCGGATTATCGGCGCGCAAAGATCCTGGTGAAGCGGGCTCGAGAAGCATTGCCGGAGCTGAAGGC
TGAAGGGTCGACGGAGTGGATGGGGCATCGCCCGGCGCTGCCCGATACCGTGCCGGTCATGGGTCGATCAGCCAGGCGCC
GCAACGTCTGGTACGCGACCGGCCATGGGCATCTCGGCCTGACCTATGCGGCCACGACCGGCCGGTTGATGGCCGATCTC
GTTACGGGCGTTGAACCGCCCGTGGACATGAAACCCTATCGCGTCGACCGCTTCTGA

Upstream 100 bases:

>100_bases
ATCACCGGTTTCTATCAGATGGGCATGGATCCGACCGATCCCTATCAACAAGGATTCACCGTGGCGGATACCTGGATGAC
GACGGTCTGAAGCCTAGAGA

Downstream 100 bases:

>100_bases
GAGCGGTGCCGGCGCAAGGCAAAAGGGAGTGAACATGCGAAGCGAACTCTATATCGACGGACAATGGGTGAAGCCGGTCA
AGGGCGGCACCTGCACGGTG

Product: putative D-amino acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MDMSGNKIPLVVVGAGIIGVVIAYELQRRGQTVVLVDRAAPGMGASYGNMASIAVTEFMPASRPGIWAQMPKWLLDPEGP
VRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGRVYEDLDALLKETGLAHMLTAEGCLSLYTDDAEFRADREHI
DILERFGFRHEILGGNAIRDLEPALTTKIGKAVLFPDNRSITDPYKLVAALTEKFQALGGRIVEADVAGFEQSEAGVSAL
RLADGRTLAAEKVVLAAGAFTARLSALLREPIPLETERGYHTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMA
GLDAPPDYRRAKILVKRAREALPELKAEGSTEWMGHRPALPDTVPVMGRSARRRNVWYATGHGHLGLTYAATTGRLMADL
VTGVEPPVDMKPYRVDRF

Sequences:

>Translated_418_residues
MDMSGNKIPLVVVGAGIIGVVIAYELQRRGQTVVLVDRAAPGMGASYGNMASIAVTEFMPASRPGIWAQMPKWLLDPEGP
VRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGRVYEDLDALLKETGLAHMLTAEGCLSLYTDDAEFRADREHI
DILERFGFRHEILGGNAIRDLEPALTTKIGKAVLFPDNRSITDPYKLVAALTEKFQALGGRIVEADVAGFEQSEAGVSAL
RLADGRTLAAEKVVLAAGAFTARLSALLREPIPLETERGYHTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMA
GLDAPPDYRRAKILVKRAREALPELKAEGSTEWMGHRPALPDTVPVMGRSARRRNVWYATGHGHLGLTYAATTGRLMADL
VTGVEPPVDMKPYRVDRF
>Mature_418_residues
MDMSGNKIPLVVVGAGIIGVVIAYELQRRGQTVVLVDRAAPGMGASYGNMASIAVTEFMPASRPGIWAQMPKWLLDPEGP
VRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGRVYEDLDALLKETGLAHMLTAEGCLSLYTDDAEFRADREHI
DILERFGFRHEILGGNAIRDLEPALTTKIGKAVLFPDNRSITDPYKLVAALTEKFQALGGRIVEADVAGFEQSEAGVSAL
RLADGRTLAAEKVVLAAGAFTARLSALLREPIPLETERGYHTQIMEPGISMRHSIIWPARAFMVTPTAGGIRVGGTVEMA
GLDAPPDYRRAKILVKRAREALPELKAEGSTEWMGHRPALPDTVPVMGRSARRRNVWYATGHGHLGLTYAATTGRLMADL
VTGVEPPVDMKPYRVDRF

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=424, Percent_Identity=26.4150943396226, Blast_Score=122, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 45555; Mature: 45555

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMSGNKIPLVVVGAGIIGVVIAYELQRRGQTVVLVDRAAPGMGASYGNMASIAVTEFMP
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCC
ASRPGIWAQMPKWLLDPEGPVRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGR
CCCCCCHHHCCHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VYEDLDALLKETGLAHMLTAEGCLSLYTDDAEFRADREHIDILERFGFRHEILGGNAIRD
HHHHHHHHHHHCCCHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHCCCCEECCCCCCHHH
LEPALTTKIGKAVLFPDNRSITDPYKLVAALTEKFQALGGRIVEADVAGFEQSEAGVSAL
CCHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHCCCCCHHCCHHEE
RLADGRTLAAEKVVLAAGAFTARLSALLREPIPLETERGYHTQIMEPGISMRHSIIWPAR
EECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHEEECCCE
AFMVTPTAGGIRVGGTVEMAGLDAPPDYRRAKILVKRAREALPELKAEGSTEWMGHRPAL
EEEEECCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDTVPVMGRSARRRNVWYATGHGHLGLTYAATTGRLMADLVTGVEPPVDMKPYRVDRF
CCCCCCCCCCCHHCCCEEEECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDMSGNKIPLVVVGAGIIGVVIAYELQRRGQTVVLVDRAAPGMGASYGNMASIAVTEFMP
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCC
ASRPGIWAQMPKWLLDPEGPVRIRPGYLPKLVPWFLRFLAASRPSKLRELEAAGAVLCGR
CCCCCCHHHCCHHHCCCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VYEDLDALLKETGLAHMLTAEGCLSLYTDDAEFRADREHIDILERFGFRHEILGGNAIRD
HHHHHHHHHHHCCCHHHHHHHHHHHEECCCHHHHCCHHHHHHHHHCCCCEECCCCCCHHH
LEPALTTKIGKAVLFPDNRSITDPYKLVAALTEKFQALGGRIVEADVAGFEQSEAGVSAL
CCHHHHHHHCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEHHHCCCCCHHCCHHEE
RLADGRTLAAEKVVLAAGAFTARLSALLREPIPLETERGYHTQIMEPGISMRHSIIWPAR
EECCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHEEECCCE
AFMVTPTAGGIRVGGTVEMAGLDAPPDYRRAKILVKRAREALPELKAEGSTEWMGHRPAL
EEEEECCCCCEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDTVPVMGRSARRRNVWYATGHGHLGLTYAATTGRLMADLVTGVEPPVDMKPYRVDRF
CCCCCCCCCCCHHCCCEEEECCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]