Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
---|---|
Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is aatAc [H]
Identifier: 190894955
GI number: 190894955
Start: 673572
End: 674780
Strand: Reverse
Name: aatAc [H]
Synonym: RHECIAT_PC0000620
Alternate gene names: 190894955
Gene position: 674780-673572 (Counterclockwise)
Preceding gene: 190894956
Following gene: 190894954
Centisome position: 61.82
GC content: 64.19
Gene sequence:
>1209_bases ATGAGCACTTTCGTGCCAGCCTCACGCGTCTCCAGGATCAAGGTTTCGCCGAGCACGGCGGCGGCGGCGCGCGCCCGCGA GCTGAAGGCGGCCGGCCGCGACATCGTCGACATGACGGTCGGCGAGCCCGACTTCGATACGCCGGATCACGTGAAGGCAG CGGCCCATGCCGCCATCGACCGGGGTGAAACCAAATACACCGCCGTCAACGGCACGCCCTCCCTGCGCAAGGCGATCATC AACAATTTCGAGCGGCGTCTCGGATTGCGATATGGCGATAACGAGATCTGCGTCGGCGGTGGCGCAAAGCAGATCCTTTT CCTTGCCTTGATGGCCAGCGTCGAGAACGATGCCGAGGTCATCATTCCGGCACCCTATTGGGTCTCCTATCCCGATATGG TGATCGCCAACGAGGGCAAGCCGATCATCGTGCAATGCCCGCAGGAGCAGGGCTTCAAGCTGACGCCGGAAGCCCTCGAA GCGGCGATCACGCCGAAGACCATGTGGTTGATCCTGAATGCGCCGTCGAACCCGACCGGCGCTGCCTATAGCCGCGACGA ACTGCACGAACTCGGAAAGGTGCTGCTGCGGCACCCCGAGATCATGATCCTCTCCGACGACATCTACGATCAGGTCTGGT TCAAGGACGAGCCGATGACGACGCTGGTCGCAGCTGTGCCGGAACTGAAGGATCGGGTGCTCCTCACGAACGGCGTGTCG AAATCCTACGCCATGACCGGTTGGCGCATCGGTTACGGAGCGGGGCCGGCTCCCCTGATCGCGGCGATCAACAAGCTGCA ATCGCAGATGTCGTCCTGCCCGTCTTCAGTCAGCCAGGCGGCGGCCGCGCATGCGCTCGCCTCCGACCAGGGCTTCGTCA CCGACAGCGTCAAGGTCTACAAGGAGCGCCGCGACTATGCCTGCCGGCGTCTGAACGCCGTGCCGGACCTGTCGTGCCTG GTGCCGGACGGGGCCTTCTACCTCTTTCCCAACTGCGCCGGCGTGATCGGCCGGAGGACGCCTGAGGGCAAGGTGATCGA GACGGACCTCGACTTCGTCCTCTATCTCCTCGACGGCGTCGGCGTGGCGGCCCTGCAGGGCGCGGCCTACGGCCTATCGC CGTATTTCCGCCTGTCGATCGCCACTTCGATGGACGCCATCACCGAAGCCTGTGATCGCATCGAGCGGGCGGTCGGCGAA TTGCGTTGA
Upstream 100 bases:
>100_bases AATCAGCCACGACGAACTCGGCGAGCTTTTCCTGACGGGCAAGATGCGCGGCGAGACTGAAGCGGTTCACTGAAACCCAA GAAAAACCAAGGACATATCC
Downstream 100 bases:
>100_bases ATTCTGCAGCAGGCGGGAGGGGCTTGCGCGTTTCCCGCCCGAGGTCTTAGGTTCCGTAAACCGAAGCTTGAGGCCATGAG CGTAGATTTCAGAAAACTGC
Product: aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSTFVPASRVSRIKVSPSTAAAARARELKAAGRDIVDMTVGEPDFDTPDHVKAAAHAAIDRGETKYTAVNGTPSLRKAII NNFERRLGLRYGDNEICVGGGAKQILFLALMASVENDAEVIIPAPYWVSYPDMVIANEGKPIIVQCPQEQGFKLTPEALE AAITPKTMWLILNAPSNPTGAAYSRDELHELGKVLLRHPEIMILSDDIYDQVWFKDEPMTTLVAAVPELKDRVLLTNGVS KSYAMTGWRIGYGAGPAPLIAAINKLQSQMSSCPSSVSQAAAAHALASDQGFVTDSVKVYKERRDYACRRLNAVPDLSCL VPDGAFYLFPNCAGVIGRRTPEGKVIETDLDFVLYLLDGVGVAALQGAAYGLSPYFRLSIATSMDAITEACDRIERAVGE LR
Sequences:
>Translated_402_residues MSTFVPASRVSRIKVSPSTAAAARARELKAAGRDIVDMTVGEPDFDTPDHVKAAAHAAIDRGETKYTAVNGTPSLRKAII NNFERRLGLRYGDNEICVGGGAKQILFLALMASVENDAEVIIPAPYWVSYPDMVIANEGKPIIVQCPQEQGFKLTPEALE AAITPKTMWLILNAPSNPTGAAYSRDELHELGKVLLRHPEIMILSDDIYDQVWFKDEPMTTLVAAVPELKDRVLLTNGVS KSYAMTGWRIGYGAGPAPLIAAINKLQSQMSSCPSSVSQAAAAHALASDQGFVTDSVKVYKERRDYACRRLNAVPDLSCL VPDGAFYLFPNCAGVIGRRTPEGKVIETDLDFVLYLLDGVGVAALQGAAYGLSPYFRLSIATSMDAITEACDRIERAVGE LR >Mature_401_residues STFVPASRVSRIKVSPSTAAAARARELKAAGRDIVDMTVGEPDFDTPDHVKAAAHAAIDRGETKYTAVNGTPSLRKAIIN NFERRLGLRYGDNEICVGGGAKQILFLALMASVENDAEVIIPAPYWVSYPDMVIANEGKPIIVQCPQEQGFKLTPEALEA AITPKTMWLILNAPSNPTGAAYSRDELHELGKVLLRHPEIMILSDDIYDQVWFKDEPMTTLVAAVPELKDRVLLTNGVSK SYAMTGWRIGYGAGPAPLIAAINKLQSQMSSCPSSVSQAAAAHALASDQGFVTDSVKVYKERRDYACRRLNAVPDLSCLV PDGAFYLFPNCAGVIGRRTPEGKVIETDLDFVLYLLDGVGVAALQGAAYGLSPYFRLSIATSMDAITEACDRIERAVGEL R
Specific function: Involved in symbiotic nitrogen fixation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=399, Percent_Identity=27.5689223057644, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI169881279, Length=399, Percent_Identity=27.5689223057644, Blast_Score=133, Evalue=3e-31, Organism=Homo sapiens, GI56713254, Length=318, Percent_Identity=28.3018867924528, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI56713256, Length=323, Percent_Identity=27.8637770897833, Blast_Score=119, Evalue=5e-27, Organism=Homo sapiens, GI169881281, Length=277, Percent_Identity=26.3537906137184, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI4507369, Length=414, Percent_Identity=25.1207729468599, Blast_Score=97, Evalue=4e-20, Organism=Escherichia coli, GI1786816, Length=400, Percent_Identity=26, Blast_Score=149, Evalue=4e-37, Organism=Escherichia coli, GI1788627, Length=411, Percent_Identity=26.5206812652068, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1788722, Length=412, Percent_Identity=28.6407766990291, Blast_Score=115, Evalue=6e-27, Organism=Caenorhabditis elegans, GI71994472, Length=363, Percent_Identity=25.068870523416, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI71994476, Length=348, Percent_Identity=25.2873563218391, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17567369, Length=320, Percent_Identity=23.75, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17567663, Length=337, Percent_Identity=21.9584569732938, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322401, Length=361, Percent_Identity=25.207756232687, Blast_Score=107, Evalue=5e-24, Organism=Drosophila melanogaster, GI28573069, Length=365, Percent_Identity=23.013698630137, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI24646114, Length=365, Percent_Identity=23.013698630137, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI28573067, Length=365, Percent_Identity=23.013698630137, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI28573065, Length=365, Percent_Identity=23.013698630137, Blast_Score=101, Evalue=1e-21, Organism=Drosophila melanogaster, GI18859735, Length=377, Percent_Identity=24.1379310344828, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 43465; Mature: 43334
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFVPASRVSRIKVSPSTAAAARARELKAAGRDIVDMTVGEPDFDTPDHVKAAAHAAID CCCCCCCHHCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHC RGETKYTAVNGTPSLRKAIINNFERRLGLRYGDNEICVGGGAKQILFLALMASVENDAEV CCCCEEEEECCCHHHHHHHHHHHHHHHCCEECCCEEEECCCHHHHHHHHHHHHCCCCCCE IIPAPYWVSYPDMVIANEGKPIIVQCPQEQGFKLTPEALEAAITPKTMWLILNAPSNPTG EEECCCEECCCCEEEECCCCEEEEECCCCCCCEECHHHHHHHCCCEEEEEEEECCCCCCC AAYSRDELHELGKVLLRHPEIMILSDDIYDQVWFKDEPMTTLVAAVPELKDRVLLTNGVS CCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHEECCCCHHHHHHHHHHHHCCEEEECCCC KSYAMTGWRIGYGAGPAPLIAAINKLQSQMSSCPSSVSQAAAAHALASDQGFVTDSVKVY CCCEECCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHH KERRDYACRRLNAVPDLSCLVPDGAFYLFPNCAGVIGRRTPEGKVIETDLDFVLYLLDGV HHHHHHHHHHHCCCCCCEEECCCCCEEECCCCHHHHCCCCCCCCEEECHHHHHHHHHHCC GVAALQGAAYGLSPYFRLSIATSMDAITEACDRIERAVGELR CHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STFVPASRVSRIKVSPSTAAAARARELKAAGRDIVDMTVGEPDFDTPDHVKAAAHAAID CCCCCCHHCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHC RGETKYTAVNGTPSLRKAIINNFERRLGLRYGDNEICVGGGAKQILFLALMASVENDAEV CCCCEEEEECCCHHHHHHHHHHHHHHHCCEECCCEEEECCCHHHHHHHHHHHHCCCCCCE IIPAPYWVSYPDMVIANEGKPIIVQCPQEQGFKLTPEALEAAITPKTMWLILNAPSNPTG EEECCCEECCCCEEEECCCCEEEEECCCCCCCEECHHHHHHHCCCEEEEEEEECCCCCCC AAYSRDELHELGKVLLRHPEIMILSDDIYDQVWFKDEPMTTLVAAVPELKDRVLLTNGVS CCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHEECCCCHHHHHHHHHHHHCCEEEECCCC KSYAMTGWRIGYGAGPAPLIAAINKLQSQMSSCPSSVSQAAAAHALASDQGFVTDSVKVY CCCEECCEEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHH KERRDYACRRLNAVPDLSCLVPDGAFYLFPNCAGVIGRRTPEGKVIETDLDFVLYLLDGV HHHHHHHHHHHCCCCCCEEECCCCCEEECCCCHHHHCCCCCCCCEEECHHHHHHHHHHCC GVAALQGAAYGLSPYFRLSIATSMDAITEACDRIERAVGELR CHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]