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The map label for this gene is yfhF [C]

Identifier: 190571644

GI number: 190571644

Start: 1344782

End: 1345168

Strand: Direct

Name: yfhF [C]

Synonym: WPa_1269

Alternate gene names: 190571644

Gene position: 1344782-1345168 (Clockwise)

Preceding gene: 190571643

Following gene: 190571645

Centisome position: 90.71

GC content: 34.88

Gene sequence:

>387_bases
ATGAGTGAATTTCAAGGAGTAAATTCTGTTAAAAAACCTATCACTCTAACCGCAAATGCAGTAGAGAGGGTAAGGTTTTT
ATTGGACAAAAAGAAGCATGCTAACCTTGAAGAAGCAATAGGAATAAGAGTTCTAATTAAGCAAAAAGGATGCTCTGGTT
TAAAATATGATATTGAGTATGCATATGATGTTCGTCCTTTGGAGTCGGTAATTGAAGAAAGCTGCAGTGATGATCAAAAA
GTCAAGGTGCTGATCGATCCAAAATCTATCATGTTTATCCTTGGCTCTGAAATGGATTATGTAGAGGAAAAATTCTCATC
AGGTTTTATTTTCAAAAATCCTAATGAGAAAGGAAAATGTGGTTGTGGAGAGAGTTTTCATGTCTAG

Upstream 100 bases:

>100_bases
TGTCTTTGCCGCCAGTAAAGATACACTGTTCAGTACTTGCTGAGGATGCTATAAAAGCTGCTATTCATGATTATCAAAAT
AAACAAAAACATTGAGGAAT

Downstream 100 bases:

>100_bases
CAACCATTTCACATTATTTGGAATTGAACCGGCTTTTAACATCAGCTTTGATGAGCTGGAGAAAAAATATATTGAGCTAA
GCAAAACTGATATAAATGAA

Product: HesB/YadR/YfhF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSEFQGVNSVKKPITLTANAVERVRFLLDKKKHANLEEAIGIRVLIKQKGCSGLKYDIEYAYDVRPLESVIEESCSDDQK
VKVLIDPKSIMFILGSEMDYVEEKFSSGFIFKNPNEKGKCGCGESFHV

Sequences:

>Translated_128_residues
MSEFQGVNSVKKPITLTANAVERVRFLLDKKKHANLEEAIGIRVLIKQKGCSGLKYDIEYAYDVRPLESVIEESCSDDQK
VKVLIDPKSIMFILGSEMDYVEEKFSSGFIFKNPNEKGKCGCGESFHV
>Mature_127_residues
SEFQGVNSVKKPITLTANAVERVRFLLDKKKHANLEEAIGIRVLIKQKGCSGLKYDIEYAYDVRPLESVIEESCSDDQKV
KVLIDPKSIMFILGSEMDYVEEKFSSGFIFKNPNEKGKCGCGESFHV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=121, Percent_Identity=42.1487603305785, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788877, Length=115, Percent_Identity=41.7391304347826, Blast_Score=94, Evalue=3e-21,
Organism=Escherichia coli, GI1786351, Length=121, Percent_Identity=33.8842975206612, Blast_Score=77, Evalue=3e-16,
Organism=Escherichia coli, GI1787974, Length=115, Percent_Identity=31.304347826087, Blast_Score=64, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=122, Percent_Identity=44.2622950819672, Blast_Score=113, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI193209025, Length=121, Percent_Identity=44.6280991735537, Blast_Score=112, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6323001, Length=115, Percent_Identity=43.4782608695652, Blast_Score=100, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24642263, Length=119, Percent_Identity=44.5378151260504, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 14426; Mature: 14295

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEFQGVNSVKKPITLTANAVERVRFLLDKKKHANLEEAIGIRVLIKQKGCSGLKYDIEY
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCCCEEEEEE
AYDVRPLESVIEESCSDDQKVKVLIDPKSIMFILGSEMDYVEEKFSSGFIFKNPNEKGKC
EECCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCEEECCCCCCCC
GCGESFHV
CCCCCCCC
>Mature Secondary Structure 
SEFQGVNSVKKPITLTANAVERVRFLLDKKKHANLEEAIGIRVLIKQKGCSGLKYDIEY
CCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHCCEEEEEECCCCCCCEEEEEE
AYDVRPLESVIEESCSDDQKVKVLIDPKSIMFILGSEMDYVEEKFSSGFIFKNPNEKGKC
EECCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCEEECCCCCCCC
GCGESFHV
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]