Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571603
Identifier: 190571603
GI number: 190571603
Start: 1299579
End: 1300115
Strand: Direct
Name: 190571603
Synonym: WPa_1226
Alternate gene names: NA
Gene position: 1299579-1300115 (Clockwise)
Preceding gene: 190571601
Following gene: 190571604
Centisome position: 87.66
GC content: 28.68
Gene sequence:
>537_bases ATGCCAACTAATACATGTTTTGTAAATGATATGGTAAGAGTTAATTTGTTTACAAAGTTGGATGATTGTAAAGTCAATAA GAGTAAGTTGATTCATGATAAATGTGGTAAAGATCTTAAGTGTAAGATTAATGACAGGACTATGAATGAACTGAAAAAAT GTTTTAAGTTTGAGATTGATGATAAGACTAAAAATGAACTGAAAGAAAATATTAAGAATGAACTAGAGAAAAGTATTAAG TTTGAGATTAGTGATAAGACTAAGAATGATCTAAAAGAAAGTATTAAGAATGAACTAGAGAAAAGTCTTAAGTTTGAGAT TGATGATAAGACTAAAAATGAACTGATAGAAAATATTAAGAATGAACTAGAAAAAGGTCTTAAGTTTGAGATTAGTGGTA AGACTAAGAATGAGCTAAAAGAAAGTATTAAGAATGAACTGGAGAAAGAGAAAAATGGAGGTACAGGGAATGCTTATTTT AGTGAAAGCGAAAGTATGGCTTTCCGTCACTATAGTGACAGCAACGACTTAATGTAA
Upstream 100 bases:
>100_bases ACTGAGGTTGTTAGTACACACATTATTCTATGTTTAATTGTTTGATAAATTTATTTATTGATGGAGTTATTTTATGTTTA AAAGCGCCTATGCTCATCCA
Downstream 100 bases:
>100_bases ACTATAATTTTTCTGGGTTTCAAAAGACCCAGAAAAGGTTGCCTTACACCAAACAAAGAGTAGAGAGAAAATCATAACTT CAACTAGCCCCACTTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MPTNTCFVNDMVRVNLFTKLDDCKVNKSKLIHDKCGKDLKCKINDRTMNELKKCFKFEIDDKTKNELKENIKNELEKSIK FEISDKTKNDLKESIKNELEKSLKFEIDDKTKNELIENIKNELEKGLKFEISGKTKNELKESIKNELEKEKNGGTGNAYF SESESMAFRHYSDSNDLM
Sequences:
>Translated_178_residues MPTNTCFVNDMVRVNLFTKLDDCKVNKSKLIHDKCGKDLKCKINDRTMNELKKCFKFEIDDKTKNELKENIKNELEKSIK FEISDKTKNDLKESIKNELEKSLKFEIDDKTKNELIENIKNELEKGLKFEISGKTKNELKESIKNELEKEKNGGTGNAYF SESESMAFRHYSDSNDLM >Mature_177_residues PTNTCFVNDMVRVNLFTKLDDCKVNKSKLIHDKCGKDLKCKINDRTMNELKKCFKFEIDDKTKNELKENIKNELEKSIKF EISDKTKNDLKESIKNELEKSLKFEIDDKTKNELIENIKNELEKGLKFEISGKTKNELKESIKNELEKEKNGGTGNAYFS ESESMAFRHYSDSNDLM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20792; Mature: 20661
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00338 SOMATOTROPIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNTCFVNDMVRVNLFTKLDDCKVNKSKLIHDKCGKDLKCKINDRTMNELKKCFKFEID CCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCC DKTKNELKENIKNELEKSIKFEISDKTKNDLKESIKNELEKSLKFEIDDKTKNELIENIK CCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH NELEKGLKFEISGKTKNELKESIKNELEKEKNGGTGNAYFSESESMAFRHYSDSNDLM HHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHEECCCCCCC >Mature Secondary Structure PTNTCFVNDMVRVNLFTKLDDCKVNKSKLIHDKCGKDLKCKINDRTMNELKKCFKFEID CCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCC DKTKNELKENIKNELEKSIKFEISDKTKNDLKESIKNELEKSLKFEIDDKTKNELIENIK CCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH NELEKGLKFEISGKTKNELKESIKNELEKEKNGGTGNAYFSESESMAFRHYSDSNDLM HHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA