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The map label for this gene is secY [H]

Identifier: 190571565

GI number: 190571565

Start: 1262171

End: 1263499

Strand: Direct

Name: secY [H]

Synonym: WPa_1185

Alternate gene names: 190571565

Gene position: 1262171-1263499 (Clockwise)

Preceding gene: 190571564

Following gene: 190571566

Centisome position: 85.14

GC content: 30.25

Gene sequence:

>1329_bases
ATGAACAGTAAATTTGCATTTAATAGTTTGGATTCTACGCTGTTATATAAAAGTGATTTACTAAAGCGTATATTTTTTAC
TCTAATGGCTTTAGTTTGTTATCGTTTAGGCACTTATGTTCCTATTCCTGGAATTAATCTTGATATAATCAATGATATAT
TTCCAAAAGAGAGTTCTGGTGTTTTTGGAGTATTTAATTTATTTTCTGGTGGCGCTTTAGCTAGAATGACGATCTTGGCG
TTAAACGTTATGCCATACATAGTTGCATCCATAGTTATGCAATTATTATCTTCTGCCGTTAAAGGAATCAATGAAATTAA
AAATGACGGAGAGTTGGGACGTCGAAAGATGAACTCTTATATACGCTATATGACTATAGTGTTTTGTATCTTTCAATCAA
TTACGATCTTAATAGGGTTAGAAAGAATGAATAGAGAAGGGGTATTAGTTGTAGTTGAACCTGGTATTATGTTTCGTACT
ATAGGTGTCTTTAGCCTTTTAGGTGGAACTATATTTTTAATATGGCTTGGTGAGCGGATCAGTGTGAGCGGTATAGGAAA
TGGTATCTCATTAATCATTTTTACTGGCATAACATCTGAATTACATAATGCTTTATCATCTCTGCTAACATTAAATAAAA
ATGGTAGTATGTCATTTTTCATTACCCTTTTTGTTATAGCATTGTTTTTTTTACTGCTCCTTTTAGTCATTTTTACAGAA
TCTTCTTATAGAAAGGTAATTGTTCAATATCCCAAAAAACAGTTTAAAAAATTACATAATGATGATTTTACTTACATTCC
ATTGAAGATCAATTTATCTGGTGTAATACCAACTATTTTTGCTAACGCAATTCTATTAACGCCTATTTCAATTGCAAATT
TCTATAAAGGTCATGCCATTGCTGATTTTATTTTAAACTACTTTATGGCAAATAAAGTGATGTACATTATAACTTACTTA
ATACTCATAGTGCTTTTTAATTTTTTCTATACCAATTTTATATTTAATCCAGAGGAAAATGCTGATTTTCTTAGGAAAAA
TGGTGGTTTTATTCCTGGTAGAGGGCCTGGAAAACATACTTCTGATTATCTTCAAGATATAGTTTTTAAATTAACATTTA
TTGGGTCTGCGTATTTGGTGGTAATATGTACTGTACCTGAAATTATGAGGTATCATTATGATATACCATTTATTTTTGGT
GGGACGAGCTTGCTGATTATAGTTAACGTTATTACTGATACTATTATGCAAGTACAATCTTATGTTTTTTCAAATAGGTA
CGATAGTTGGATAAAGAAATATGAGTCTAAAACAAGGAGACTAAAGTGA

Upstream 100 bases:

>100_bases
ATTAAGGGAAAAATTTGTGTTTCATGTTGATTTTGCATCAGAAGCTGCAAAAAGATCTGTAGCTTCAGTTGGTGGTAGTG
TAGAAATACTATCGTAAATC

Downstream 100 bases:

>100_bases
TTATTACAATTTTTGGTCCTCCTGGCTCTGGTAAGGGTACTCAGTCCAGTTTGTTAATAGCAAAGTATAATTTTAAATTA
GTTTCAGTAGGAGATTTATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MNSKFAFNSLDSTLLYKSDLLKRIFFTLMALVCYRLGTYVPIPGINLDIINDIFPKESSGVFGVFNLFSGGALARMTILA
LNVMPYIVASIVMQLLSSAVKGINEIKNDGELGRRKMNSYIRYMTIVFCIFQSITILIGLERMNREGVLVVVEPGIMFRT
IGVFSLLGGTIFLIWLGERISVSGIGNGISLIIFTGITSELHNALSSLLTLNKNGSMSFFITLFVIALFFLLLLLVIFTE
SSYRKVIVQYPKKQFKKLHNDDFTYIPLKINLSGVIPTIFANAILLTPISIANFYKGHAIADFILNYFMANKVMYIITYL
ILIVLFNFFYTNFIFNPEENADFLRKNGGFIPGRGPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEIMRYHYDIPFIFG
GTSLLIIVNVITDTIMQVQSYVFSNRYDSWIKKYESKTRRLK

Sequences:

>Translated_442_residues
MNSKFAFNSLDSTLLYKSDLLKRIFFTLMALVCYRLGTYVPIPGINLDIINDIFPKESSGVFGVFNLFSGGALARMTILA
LNVMPYIVASIVMQLLSSAVKGINEIKNDGELGRRKMNSYIRYMTIVFCIFQSITILIGLERMNREGVLVVVEPGIMFRT
IGVFSLLGGTIFLIWLGERISVSGIGNGISLIIFTGITSELHNALSSLLTLNKNGSMSFFITLFVIALFFLLLLLVIFTE
SSYRKVIVQYPKKQFKKLHNDDFTYIPLKINLSGVIPTIFANAILLTPISIANFYKGHAIADFILNYFMANKVMYIITYL
ILIVLFNFFYTNFIFNPEENADFLRKNGGFIPGRGPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEIMRYHYDIPFIFG
GTSLLIIVNVITDTIMQVQSYVFSNRYDSWIKKYESKTRRLK
>Mature_442_residues
MNSKFAFNSLDSTLLYKSDLLKRIFFTLMALVCYRLGTYVPIPGINLDIINDIFPKESSGVFGVFNLFSGGALARMTILA
LNVMPYIVASIVMQLLSSAVKGINEIKNDGELGRRKMNSYIRYMTIVFCIFQSITILIGLERMNREGVLVVVEPGIMFRT
IGVFSLLGGTIFLIWLGERISVSGIGNGISLIIFTGITSELHNALSSLLTLNKNGSMSFFITLFVIALFFLLLLLVIFTE
SSYRKVIVQYPKKQFKKLHNDDFTYIPLKINLSGVIPTIFANAILLTPISIANFYKGHAIADFILNYFMANKVMYIITYL
ILIVLFNFFYTNFIFNPEENADFLRKNGGFIPGRGPGKHTSDYLQDIVFKLTFIGSAYLVVICTVPEIMRYHYDIPFIFG
GTSLLIIVNVITDTIMQVQSYVFSNRYDSWIKKYESKTRRLK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=425, Percent_Identity=41.8823529411765, Blast_Score=320, Evalue=2e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 50072; Mature: 50072

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKFAFNSLDSTLLYKSDLLKRIFFTLMALVCYRLGTYVPIPGINLDIINDIFPKESSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
VFGVFNLFSGGALARMTILALNVMPYIVASIVMQLLSSAVKGINEIKNDGELGRRKMNSY
CEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IRYMTIVFCIFQSITILIGLERMNREGVLVVVEPGIMFRTIGVFSLLGGTIFLIWLGERI
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEEECCEE
SVSGIGNGISLIIFTGITSELHNALSSLLTLNKNGSMSFFITLFVIALFFLLLLLVIFTE
EEEECCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SSYRKVIVQYPKKQFKKLHNDDFTYIPLKINLSGVIPTIFANAILLTPISIANFYKGHAI
CHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHH
ADFILNYFMANKVMYIITYLILIVLFNFFYTNFIFNPEENADFLRKNGGFIPGRGPGKHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCH
SDYLQDIVFKLTFIGSAYLVVICTVPEIMRYHYDIPFIFGGTSLLIIVNVITDTIMQVQS
HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH
YVFSNRYDSWIKKYESKTRRLK
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSKFAFNSLDSTLLYKSDLLKRIFFTLMALVCYRLGTYVPIPGINLDIINDIFPKESSG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
VFGVFNLFSGGALARMTILALNVMPYIVASIVMQLLSSAVKGINEIKNDGELGRRKMNSY
CEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
IRYMTIVFCIFQSITILIGLERMNREGVLVVVEPGIMFRTIGVFSLLGGTIFLIWLGERI
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEEEECCEE
SVSGIGNGISLIIFTGITSELHNALSSLLTLNKNGSMSFFITLFVIALFFLLLLLVIFTE
EEEECCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SSYRKVIVQYPKKQFKKLHNDDFTYIPLKINLSGVIPTIFANAILLTPISIANFYKGHAI
CHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHH
ADFILNYFMANKVMYIITYLILIVLFNFFYTNFIFNPEENADFLRKNGGFIPGRGPGKHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCH
SDYLQDIVFKLTFIGSAYLVVICTVPEIMRYHYDIPFIFGGTSLLIIVNVITDTIMQVQS
HHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH
YVFSNRYDSWIKKYESKTRRLK
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA