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The map label for this gene is atpC

Identifier: 190571538

GI number: 190571538

Start: 1243416

End: 1243757

Strand: Direct

Name: atpC

Synonym: WPa_1158

Alternate gene names: 190571538

Gene position: 1243416-1243757 (Clockwise)

Preceding gene: 190571537

Following gene: 190571540

Centisome position: 83.88

GC content: 30.99

Gene sequence:

>342_bases
ATGAACACTTTTAAGGTGCAATTTTTTTCTCCTGATAATCGAATTTCATTCGATGAAGTGGTTTCGCTTTCAGTGAATGG
GCTTGAAGGAGAGCTAGTGATTTTAGCTTACCATTCTCCTTACTTAATTTATTTATTGCCTGGTATAATTACTGCTCAAA
TGAGTAACCAGACAAAGGAAAAAGTTGTAATTGATAATGGTATATTAGAGGTTGCAAATAATAATTGTAGCATTATAACG
AATCAAATTCAGGTTTTTGATCATTTGACTCATGATGAGGAATCATTAAAAGATAAGAGAGTTGGTATATATTTAAGTTA
TCTTGATGTCAAATCTCTTTAG

Upstream 100 bases:

>100_bases
ATCTGCCAGAAGCTGCTTTTTATATGGTGGGAAGTATAAGTGAAGCAATAGAAAAGGCTGAATCAATAAAAGCTGAAGTT
GGAGCCGGACATTAAAGATT

Downstream 100 bases:

>100_bases
GGGCTCTTTTTTGTTCAAGAAATAAGTCTACTCTTGTCATCTCAATGTTTGTCGTTCAAGTAGCTGACACACAACTCGGA
TGACAAGAGGGGCTACTTGA

Product: ATP synthase F1, epsilon subunit

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MNTFKVQFFSPDNRISFDEVVSLSVNGLEGELVILAYHSPYLIYLLPGIITAQMSNQTKEKVVIDNGILEVANNNCSIIT
NQIQVFDHLTHDEESLKDKRVGIYLSYLDVKSL

Sequences:

>Translated_113_residues
MNTFKVQFFSPDNRISFDEVVSLSVNGLEGELVILAYHSPYLIYLLPGIITAQMSNQTKEKVVIDNGILEVANNNCSIIT
NQIQVFDHLTHDEESLKDKRVGIYLSYLDVKSL
>Mature_113_residues
MNTFKVQFFSPDNRISFDEVVSLSVNGLEGELVILAYHSPYLIYLLPGIITAQMSNQTKEKVVIDNGILEVANNNCSIIT
NQIQVFDHLTHDEESLKDKRVGIYLSYLDVKSL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_WOLPP (B3CN18)

Other databases:

- EMBL:   AM999887
- RefSeq:   YP_001975896.1
- EnsemblBacteria:   EBWOLT00000000099
- GeneID:   6384568
- GenomeReviews:   AM999887_GR
- KEGG:   wpi:WPa_1158
- GeneTree:   EBGT00050000031234
- HOGENOM:   HBG750972
- OMA:   NNCSIIT
- ProtClustDB:   CLSK739882
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 12778; Mature: 12778

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFKVQFFSPDNRISFDEVVSLSVNGLEGELVILAYHSPYLIYLLPGIITAQMSNQTKE
CCEEEEEEECCCCCCCHHHEEEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCCCCCC
KVVIDNGILEVANNNCSIITNQIQVFDHLTHDEESLKDKRVGIYLSYLDVKSL
EEEEECCEEEEECCCCEEEEEEEEEECCCCCCCHHCCCCEEEEEEEEEEEECC
>Mature Secondary Structure
MNTFKVQFFSPDNRISFDEVVSLSVNGLEGELVILAYHSPYLIYLLPGIITAQMSNQTKE
CCEEEEEEECCCCCCCHHHEEEEEECCCCCCEEEEEECCCEEEEEECCCEEEECCCCCCC
KVVIDNGILEVANNNCSIITNQIQVFDHLTHDEESLKDKRVGIYLSYLDVKSL
EEEEECCEEEEECCCCEEEEEEEEEECCCCCCCHHCCCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA