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The map label for this gene is atpD [H]

Identifier: 190571537

GI number: 190571537

Start: 1241974

End: 1243410

Strand: Direct

Name: atpD [H]

Synonym: WPa_1157

Alternate gene names: 190571537

Gene position: 1241974-1243410 (Clockwise)

Preceding gene: 190571536

Following gene: 190571538

Centisome position: 83.78

GC content: 37.93

Gene sequence:

>1437_bases
ATGAGTACAGGTAAAGTAGTTAAAATAACTCAAGCAGTTGTTGATTTAAAATTTGAAGACGGGTTGCCTAAGATATTTAA
TGCTTTAAAAAGCAAACTAAAATATAAGGGCAAGGAGCTAGTTTTAGAGGTTTCACAGCATATAGGTGACAATATAGTTC
GTTGCATTGCTATGGATAGCACAGATGGTATGTCAAGAGGTGATGAGTTTGTTGATACAGGTGCACCAATATCAGTTCCG
GTTGGACGCTCAACTTTAGGAAGGATTTTTAATGTTGTAGGGGAGCTTATAGATGAGTGTGGTCCGCTAAAAGGAAAGTA
TGATTTAGAACCTATACATAGATCACCTCCAAGCTTTACTGAGCAGAAGATACAGGAAGAAGTTTTAGTTACAGGAATAA
AGGTTATAGATCTTCTTGCTCCTTATCTTAAAGGAGGAAAAATTGGCTTATTTGGTGGAGCTGGTGTTGGTAAAACAGTT
CTGATAATGGAGCTGATTAACAACATAGCAAAAGCTCATAAAGGATTTTCTGTGTTTGCTGGAGTAGGAGAGAGAACGCG
TGAAGGTAATGATCTTTATAACGAGATGATTACTTCGAATGTAATAGATATAAATGAGCACGAAAAATCTCAAGCCGTTT
TGGTTTATGGTCAAATGAATGAACCTCCTGGAGCAAGGGCTAGGGTTGCTTTAACAGCACTAACTATGGCGGAGTATTTT
CGTGATCATGAAAATCAAGATGTTCTATTTTTTGTAGATAATATCTTCCGTTTTACTCAAGCTGGCTCTGAAATTTCTGC
TTTGCTTGGAAGAATACCGTCGGCTGTTGGTTATCAGCCAACTCTTGCGACTGATATGGGCGCTATGCAAGAGAGAATAG
CCTCAACTACTGCTGGTTCTATTACTTCTGTACAGGCTATATATGTTCCTGCAGACGATTTGACCGATCCAGCTCCAGCA
ACGACATTCTCTCATCTTGATGCAACCACAGTGTTGTCAAGGCAGATAGCTGAAATGGGTATATATCCTGCTGTTGATCC
ACTTGACTCAACTTCTCAGTCTTTATCTGCTGAAATCATTGGTGAAGAACATTATAATGTGGCTTCTGAGGTGAAACGTA
TATTGCAAACTTATAAGTCGCTGCAAGATATTATCGCAATACTTGGTATGGATGAACTATCTGATGAAGATAAAATTATT
GTTGATAGAGCTCGTAAAATTCAGAAGTTTCTTTCTCAACCTTTTCATGTTGCGGAGGTATTTACTGGCATGTCTGGCAA
ATTTGTTTCACTTTCTGATACTATTTCTAGTTTTAAAGGAATTATTGAAGGTAAATATGATCATCTGCCAGAAGCTGCTT
TTTATATGGTGGGAAGTATAAGTGAAGCAATAGAAAAGGCTGAATCAATAAAAGCTGAAGTTGGAGCCGGACATTAA

Upstream 100 bases:

>100_bases
CTAGTAAGTGTTTTAATATTGCAAAATTTCTGTTAATAATATAAGATTTATTTTCTTTAGAAGTTCTTTTATAGAATTGT
AGTGTTAGGTGATGAAAGAG

Downstream 100 bases:

>100_bases
AGATTATGAACACTTTTAAGGTGCAATTTTTTTCTCCTGATAATCGAATTTCATTCGATGAAGTGGTTTCGCTTTCAGTG
AATGGGCTTGAAGGAGAGCT

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MSTGKVVKITQAVVDLKFEDGLPKIFNALKSKLKYKGKELVLEVSQHIGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVP
VGRSTLGRIFNVVGELIDECGPLKGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTV
LIMELINNIAKAHKGFSVFAGVGERTREGNDLYNEMITSNVIDINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYF
RDHENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMGAMQERIASTTAGSITSVQAIYVPADDLTDPAPA
TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDEDKII
VDRARKIQKFLSQPFHVAEVFTGMSGKFVSLSDTISSFKGIIEGKYDHLPEAAFYMVGSISEAIEKAESIKAEVGAGH

Sequences:

>Translated_478_residues
MSTGKVVKITQAVVDLKFEDGLPKIFNALKSKLKYKGKELVLEVSQHIGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVP
VGRSTLGRIFNVVGELIDECGPLKGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTV
LIMELINNIAKAHKGFSVFAGVGERTREGNDLYNEMITSNVIDINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYF
RDHENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMGAMQERIASTTAGSITSVQAIYVPADDLTDPAPA
TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDEDKII
VDRARKIQKFLSQPFHVAEVFTGMSGKFVSLSDTISSFKGIIEGKYDHLPEAAFYMVGSISEAIEKAESIKAEVGAGH
>Mature_477_residues
STGKVVKITQAVVDLKFEDGLPKIFNALKSKLKYKGKELVLEVSQHIGDNIVRCIAMDSTDGMSRGDEFVDTGAPISVPV
GRSTLGRIFNVVGELIDECGPLKGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVL
IMELINNIAKAHKGFSVFAGVGERTREGNDLYNEMITSNVIDINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFR
DHENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMGAMQERIASTTAGSITSVQAIYVPADDLTDPAPAT
TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDEDKIIV
DRARKIQKFLSQPFHVAEVFTGMSGKFVSLSDTISSFKGIIEGKYDHLPEAAFYMVGSISEAIEKAESIKAEVGAGH

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=474, Percent_Identity=70.6751054852321, Blast_Score=685, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=321, Percent_Identity=28.0373831775701, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI19913426, Length=372, Percent_Identity=25.5376344086022, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI19913428, Length=369, Percent_Identity=25.4742547425474, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI50345984, Length=379, Percent_Identity=24.0105540897098, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4757810, Length=379, Percent_Identity=24.0105540897098, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1790170, Length=471, Percent_Identity=65.3927813163482, Blast_Score=617, Evalue=1e-178,
Organism=Escherichia coli, GI1788251, Length=320, Percent_Identity=30, Blast_Score=125, Evalue=8e-30,
Organism=Escherichia coli, GI1790172, Length=393, Percent_Identity=24.6819338422392, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25144756, Length=474, Percent_Identity=68.5654008438818, Blast_Score=671, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=349, Percent_Identity=28.3667621776504, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17570191, Length=391, Percent_Identity=25.3196930946292, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17510931, Length=361, Percent_Identity=25.4847645429363, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71988080, Length=362, Percent_Identity=24.0331491712707, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71988063, Length=362, Percent_Identity=24.0331491712707, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322581, Length=463, Percent_Identity=71.2742980561555, Blast_Score=672, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=360, Percent_Identity=27.5, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=443, Percent_Identity=23.9277652370203, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6320016, Length=238, Percent_Identity=27.7310924369748, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24638766, Length=471, Percent_Identity=70.4883227176221, Blast_Score=677, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=469, Percent_Identity=65.8848614072495, Blast_Score=629, Evalue=1e-180,
Organism=Drosophila melanogaster, GI24583992, Length=318, Percent_Identity=27.3584905660377, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24583988, Length=345, Percent_Identity=26.0869565217391, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583986, Length=345, Percent_Identity=26.0869565217391, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583984, Length=345, Percent_Identity=26.0869565217391, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI20129479, Length=320, Percent_Identity=27.8125, Blast_Score=113, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24638768, Length=93, Percent_Identity=53.763440860215, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI281361666, Length=362, Percent_Identity=26.5193370165746, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24646341, Length=362, Percent_Identity=26.5193370165746, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI17136796, Length=362, Percent_Identity=26.5193370165746, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24658560, Length=384, Percent_Identity=24.21875, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 51856; Mature: 51725

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGKVVKITQAVVDLKFEDGLPKIFNALKSKLKYKGKELVLEVSQHIGDNIVRCIAMDS
CCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHEEEEEECC
TDGMSRGDEFVDTGAPISVPVGRSTLGRIFNVVGELIDECGPLKGKYDLEPIHRSPPSFT
CCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
EQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKAHKGFSVFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEC
GVGERTREGNDLYNEMITSNVIDINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
RDHENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMGAMQERIASTTAGS
HCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCCC
ITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEII
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
GEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDEDKIIVDRARKIQKFLSQPFHVAEV
CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHH
FTGMSGKFVSLSDTISSFKGIIEGKYDHLPEAAFYMVGSISEAIEKAESIKAEVGAGH
HHCCCCCEEEHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
STGKVVKITQAVVDLKFEDGLPKIFNALKSKLKYKGKELVLEVSQHIGDNIVRCIAMDS
CCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHEEEEEECC
TDGMSRGDEFVDTGAPISVPVGRSTLGRIFNVVGELIDECGPLKGKYDLEPIHRSPPSFT
CCCCCCCCHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
EQKIQEEVLVTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELINNIAKAHKGFSVFA
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEC
GVGERTREGNDLYNEMITSNVIDINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH
RDHENQDVLFFVDNIFRFTQAGSEISALLGRIPSAVGYQPTLATDMGAMQERIASTTAGS
HCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCCC
ITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEII
CEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
GEEHYNVASEVKRILQTYKSLQDIIAILGMDELSDEDKIIVDRARKIQKFLSQPFHVAEV
CCHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHCCCHHHHHH
FTGMSGKFVSLSDTISSFKGIIEGKYDHLPEAAFYMVGSISEAIEKAESIKAEVGAGH
HHCCCCCEEEHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA