| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190571382
Identifier: 190571382
GI number: 190571382
Start: 1057400
End: 1058155
Strand: Direct
Name: 190571382
Synonym: WPa_0990
Alternate gene names: NA
Gene position: 1057400-1058155 (Clockwise)
Preceding gene: 190571381
Following gene: 190571385
Centisome position: 71.33
GC content: 33.07
Gene sequence:
>756_bases ATGAATTATTGTAAATTACTCGATGGAAGTAATGGCCATATAGCATATCGAAAGCTACAAGGAAAGAAGGCTTCTATAGT TTTTTTTAGTGGTTTTGCATCCAATATGGATGGAACTAAAGCAACTGCCGTTTACAAATTTTGCCAAGAAAATGATATAG CACTTGTGCTCTTTGATTATTTTGGCCATGGTAATTCAAGCGGTGATTTTGCTGATTATACAATAAGTGATTGGCAAAAA AATTGTGCTAAAGTGATAAGTGAATTAACTAGCAATAAACAAATAATTATAGGTTCAAGTATGGGAGGATGGCTGATGCT GCTCACTGCTCTTCAATTTCCAGAAAAAATTGCAGCATTAATCGGCATATCGTCTGCTCCTGATTTTACTGAAGATTTGA TATTCAAGCAATTGTCAGGCAAGCAAAAAGAAGAACTAGGTTCTAAAGGTGTAATAGATTTTACTTCGGAGCATTGTGCA TACAAAATAACTAAAAATCTGATCGAAGACGGTAGAAAGAACCTTCTTTTAAACAGAGAAGCAATAGATATAAACTGTCC TGTGCGCTTATTGCATAGCATTAATGATAAAGATGTTCCTTATCAAACTTCATTGAATTTAGCTGAAAAAATTAAGTCAA CAGACGTTGAAGTACACTTAATAAAATCAGCAGAACACAACATGTCTGATAATCATTCACTGAAAATTTTATTTAAGACC ATCAGAGAATTTTTGCCAGGAGAAATATATAATTGA
Upstream 100 bases:
>100_bases CGTATGGCATTTGCAGGCATTTCCAATCCACAAGAGATTGCAGATCTAGTCAGCTATTTGCGTTCGATGAGCGATAGTCC GGTTGCCTTGCCAAAGTAGT
Downstream 100 bases:
>100_bases AGTAATTCAGATGTGTTTGTCGTAAGAGCTGCAGTTATAGCTTCAACAGTAGGCACTATTCTTGATCACCTCAACATTTT CTCTTGGCAATTCTTTAATA
Product: hydrolase, alpha/beta fold family
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNYCKLLDGSNGHIAYRKLQGKKASIVFFSGFASNMDGTKATAVYKFCQENDIALVLFDYFGHGNSSGDFADYTISDWQK NCAKVISELTSNKQIIIGSSMGGWLMLLTALQFPEKIAALIGISSAPDFTEDLIFKQLSGKQKEELGSKGVIDFTSEHCA YKITKNLIEDGRKNLLLNREAIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLKILFKT IREFLPGEIYN
Sequences:
>Translated_251_residues MNYCKLLDGSNGHIAYRKLQGKKASIVFFSGFASNMDGTKATAVYKFCQENDIALVLFDYFGHGNSSGDFADYTISDWQK NCAKVISELTSNKQIIIGSSMGGWLMLLTALQFPEKIAALIGISSAPDFTEDLIFKQLSGKQKEELGSKGVIDFTSEHCA YKITKNLIEDGRKNLLLNREAIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLKILFKT IREFLPGEIYN >Mature_251_residues MNYCKLLDGSNGHIAYRKLQGKKASIVFFSGFASNMDGTKATAVYKFCQENDIALVLFDYFGHGNSSGDFADYTISDWQK NCAKVISELTSNKQIIIGSSMGGWLMLLTALQFPEKIAALIGISSAPDFTEDLIFKQLSGKQKEELGSKGVIDFTSEHCA YKITKNLIEDGRKNLLLNREAIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLKILFKT IREFLPGEIYN
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=235, Percent_Identity=39.5744680851064, Blast_Score=181, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28027; Mature: 28027
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYCKLLDGSNGHIAYRKLQGKKASIVFFSGFASNMDGTKATAVYKFCQENDIALVLFDY CCCEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEE FGHGNSSGDFADYTISDWQKNCAKVISELTSNKQIIIGSSMGGWLMLLTALQFPEKIAAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCHHHHHHH IGISSAPDFTEDLIFKQLSGKQKEELGSKGVIDFTSEHCAYKITKNLIEDGRKNLLLNRE HCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHCCHHHEEECCC AIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLKILFKT EEECCCHHHHHHCCCCCCCCCHHCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH IREFLPGEIYN HHHHCCCCCCC >Mature Secondary Structure MNYCKLLDGSNGHIAYRKLQGKKASIVFFSGFASNMDGTKATAVYKFCQENDIALVLFDY CCCEEEEECCCCCEEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEE FGHGNSSGDFADYTISDWQKNCAKVISELTSNKQIIIGSSMGGWLMLLTALQFPEKIAAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCHHHHHHH IGISSAPDFTEDLIFKQLSGKQKEELGSKGVIDFTSEHCAYKITKNLIEDGRKNLLLNRE HCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCEEECCCHHHHHHHHHHHHCCHHHEEECCC AIDINCPVRLLHSINDKDVPYQTSLNLAEKIKSTDVEVHLIKSAEHNMSDNHSLKILFKT EEECCCHHHHHHCCCCCCCCCHHCCCHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH IREFLPGEIYN HHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA