Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190571192
Identifier: 190571192
GI number: 190571192
Start: 869255
End: 870016
Strand: Reverse
Name: 190571192
Synonym: WPa_0790
Alternate gene names: NA
Gene position: 870016-869255 (Counterclockwise)
Preceding gene: 190571193
Following gene: 190571185
Centisome position: 58.69
GC content: 34.78
Gene sequence:
>762_bases ATGACTTATAAAAAGATAGAAAAACGTAGTATATCTTTTGATGCTACAAAATCAAAATTTTCAAACGATAGGTTTCAAAT AGATTCCTCATCTAATGAGTCAATAGATACCATTGGTAAAAAATTTAAGTATGAAGTGAAACTTCCAGGTGTTATTCACA CTACAACAAGAAAAAATAATGTTGGAAGCGGATTAAATGAGTTGGATCTAAGAAAGAAAAATGAAAACTCTTTCAAGACA CCAATAAAGAATATTGAAGAATCAGATAGTAAGAGAAACCAAAGTCATTTGCTGTTTCAGGAGGACTCATTTCCAGAACT ACCAGCATGTGCATATAAGCCAGCACTGCTGCCAAAACCATCAAAAGAAAAAATAAAGGAAGCTGTAGATAAAATGCGCA ATAATAGAAAAGCTCATAATTCTGCAAGTGTTGAAAATGGTGTTAGTTCAGACAGGTTCAAAGTGCGCCCGTTCTTATGT AGTGATATAGATGGATATGTAGCTCCTGACAAACGTGACCGTAATCTAGAAAGGTGTAGGGTTACACATGATAGCAGTAA GCTTGAAGCACAAATGGAAAGAAAGCATGGGTTTCAATCAGATCCAAGTGTTAAGCATGTAAAGGCTGATACTGTAGTAT GTTCTATTACTAAAGGTCATGACAAAAAAGGCGTTAAATCTGATGTCTCATATACACAAGAGCCTACATCAGAAATGTCT AAGGTTAATGTGAGAGAATTAGCAAATAGGTTCCGTGGCTAA
Upstream 100 bases:
>100_bases AGAAAACCCTACGGTGATGCTTCTTGAGCCTTTATTATTATAATAAAATTAATACCTCTTAGTTTATACTTTTATTAGTT AATAGGTTTAGAGGTAAAAT
Downstream 100 bases:
>100_bases TCATTATTGGATTTTTCGAATAACAATTGCTTAAGATTTTATAAACTGTGCATATAGTACTCTATAAGAGAAAGAGAGGT GTGACAACTTCTCTCTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTYKKIEKRSISFDATKSKFSNDRFQIDSSSNESIDTIGKKFKYEVKLPGVIHTTTRKNNVGSGLNELDLRKKNENSFKT PIKNIEESDSKRNQSHLLFQEDSFPELPACAYKPALLPKPSKEKIKEAVDKMRNNRKAHNSASVENGVSSDRFKVRPFLC SDIDGYVAPDKRDRNLERCRVTHDSSKLEAQMERKHGFQSDPSVKHVKADTVVCSITKGHDKKGVKSDVSYTQEPTSEMS KVNVRELANRFRG
Sequences:
>Translated_253_residues MTYKKIEKRSISFDATKSKFSNDRFQIDSSSNESIDTIGKKFKYEVKLPGVIHTTTRKNNVGSGLNELDLRKKNENSFKT PIKNIEESDSKRNQSHLLFQEDSFPELPACAYKPALLPKPSKEKIKEAVDKMRNNRKAHNSASVENGVSSDRFKVRPFLC SDIDGYVAPDKRDRNLERCRVTHDSSKLEAQMERKHGFQSDPSVKHVKADTVVCSITKGHDKKGVKSDVSYTQEPTSEMS KVNVRELANRFRG >Mature_252_residues TYKKIEKRSISFDATKSKFSNDRFQIDSSSNESIDTIGKKFKYEVKLPGVIHTTTRKNNVGSGLNELDLRKKNENSFKTP IKNIEESDSKRNQSHLLFQEDSFPELPACAYKPALLPKPSKEKIKEAVDKMRNNRKAHNSASVENGVSSDRFKVRPFLCS DIDGYVAPDKRDRNLERCRVTHDSSKLEAQMERKHGFQSDPSVKHVKADTVVCSITKGHDKKGVKSDVSYTQEPTSEMSK VNVRELANRFRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28786; Mature: 28654
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYKKIEKRSISFDATKSKFSNDRFQIDSSSNESIDTIGKKFKYEVKLPGVIHTTTRKNN CCHHHHHHHCCCCCHHHHHCCCCCEEECCCCCCCHHHHHHHEEEEEECCCEEEECCCCCC VGSGLNELDLRKKNENSFKTPIKNIEESDSKRNQSHLLFQEDSFPELPACAYKPALLPKP CCCCCCHHHCCCCCCCCHHCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCCCC SKEKIKEAVDKMRNNRKAHNSASVENGVSSDRFKVRPFLCSDIDGYVAPDKRDRNLERCR CHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCHHCCCCCCCCCCCCCCCCHHHHE VTHDSSKLEAQMERKHGFQSDPSVKHVKADTVVCSITKGHDKKGVKSDVSYTQEPTSEMS ECCCCHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCCHHHHHHCCCCHHHHH KVNVRELANRFRG HCCHHHHHHHHCC >Mature Secondary Structure TYKKIEKRSISFDATKSKFSNDRFQIDSSSNESIDTIGKKFKYEVKLPGVIHTTTRKNN CHHHHHHHCCCCCHHHHHCCCCCEEECCCCCCCHHHHHHHEEEEEECCCEEEECCCCCC VGSGLNELDLRKKNENSFKTPIKNIEESDSKRNQSHLLFQEDSFPELPACAYKPALLPKP CCCCCCHHHCCCCCCCCHHCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCCCCC SKEKIKEAVDKMRNNRKAHNSASVENGVSSDRFKVRPFLCSDIDGYVAPDKRDRNLERCR CHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCEEECCHHCCCCCCCCCCCCCCCCHHHHE VTHDSSKLEAQMERKHGFQSDPSVKHVKADTVVCSITKGHDKKGVKSDVSYTQEPTSEMS ECCCCHHHHHHHHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCCHHHHHHCCCCHHHHH KVNVRELANRFRG HCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA