Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is asd [H]
Identifier: 190571122
GI number: 190571122
Start: 785309
End: 786331
Strand: Reverse
Name: asd [H]
Synonym: WPa_0720
Alternate gene names: 190571122
Gene position: 786331-785309 (Counterclockwise)
Preceding gene: 190571124
Following gene: 190571120
Centisome position: 53.04
GC content: 36.17
Gene sequence:
>1023_bases ATGGGATGTAAGATTGCAGTTATTGGAGCAACAGGAAGAGTAGGATATGAGGTATTGACCATGCTTGCTGAGTTTCAAAA AGAGGGAAAATTTTCGATAGATTCTGTTGTTGCTTTTGCATCGAAAAAATCAAAGGGAAAAAAGGTAAGTTTCGGCGATG AAGAATTAACTGTCTTAGACCTTGAGAACTACGATTTTGCTGGAATTAATATAGCAATTTTCTGTGCTGGGTCTCATGTT TCCGAGAGATACGTACCGATTGCAACTGAAGCTGGATGTATTGTCGTAGATAATACCTCTCATTTTAGGATGAAAGAAGG CGTGCCACTAGTTATTCCAGAGATCAACAAAGATAAAATTACGGAGTATAAAAACCATAACATAATATCTAATCCAAATT GTACTACAATACAAATGTTGCTGGCATTACATTTATTACACCAAAAAGCAAAAATAAAGAGAATCGTTGCTTCAACTTAT CAATCAACTTCTGGTGTAGGTAAAGCAGCAATGGATGAGCTTTACAATCAGACAAAAAAAATCTTTATGAATGAAGCTAA AAAACCTGAAATATTTCCTAAGCAAATAGCATTTAATTGCATTCCTCATATAGGAGAGTTCATGGAAGATGGTTCTACAA AAGAGGAGTGGAAAATGCAAGAGGAGGCAAAAAAAATTTTAGAAGAGGATATAAAAGTAACTGCAACTTGTGTCCGAGTA CCTGTTCTTGTTGGTCATGCTATAGCAGTAAATGTAGAATTTGATCAGCATATAACTGAAGAAGAAGCTCGTGAAATGCT CAGTGAAGACGATGGAGTTTTAGTGCAAGATAAGCGCGAAGATGGTGGATATATGACTCAGATTGATGTTGTGCAAGAGA ATGCCGTATACATATCGCGTATTAGACAAGACGATACCGTTAAACACGGATTAAATATGTGGATAGTAGCTGATAATCTA CGCAAAGGTGCAGCACTAAATATAGTGCAGATCTTGGAGATCTTGATCAAAGAGCATTTATAG
Upstream 100 bases:
>100_bases ATAACTAAATTATGGTTAATTGCAAGGTAAAAATATTAAAGTAATTGTAAATTTTATCAGTAAAAATATAATATAGCTTT AAAATCAGAGGTTTATTTAT
Downstream 100 bases:
>100_bases CTCAATAGCTTAAATCTATATTGACATGTCCCATTTTACGCTTGTCCCTAACCTCTTTTTTCCCATATATGGTTAAACTA GCTTTTTCGTTGCTCAAATA
Product: aspartate-semialdehyde dehydrogenase
Products: NA
Alternate protein names: ASA dehydrogenase; ASADH [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGCKIAVIGATGRVGYEVLTMLAEFQKEGKFSIDSVVAFASKKSKGKKVSFGDEELTVLDLENYDFAGINIAIFCAGSHV SERYVPIATEAGCIVVDNTSHFRMKEGVPLVIPEINKDKITEYKNHNIISNPNCTTIQMLLALHLLHQKAKIKRIVASTY QSTSGVGKAAMDELYNQTKKIFMNEAKKPEIFPKQIAFNCIPHIGEFMEDGSTKEEWKMQEEAKKILEEDIKVTATCVRV PVLVGHAIAVNVEFDQHITEEEAREMLSEDDGVLVQDKREDGGYMTQIDVVQENAVYISRIRQDDTVKHGLNMWIVADNL RKGAALNIVQILEILIKEHL
Sequences:
>Translated_340_residues MGCKIAVIGATGRVGYEVLTMLAEFQKEGKFSIDSVVAFASKKSKGKKVSFGDEELTVLDLENYDFAGINIAIFCAGSHV SERYVPIATEAGCIVVDNTSHFRMKEGVPLVIPEINKDKITEYKNHNIISNPNCTTIQMLLALHLLHQKAKIKRIVASTY QSTSGVGKAAMDELYNQTKKIFMNEAKKPEIFPKQIAFNCIPHIGEFMEDGSTKEEWKMQEEAKKILEEDIKVTATCVRV PVLVGHAIAVNVEFDQHITEEEAREMLSEDDGVLVQDKREDGGYMTQIDVVQENAVYISRIRQDDTVKHGLNMWIVADNL RKGAALNIVQILEILIKEHL >Mature_339_residues GCKIAVIGATGRVGYEVLTMLAEFQKEGKFSIDSVVAFASKKSKGKKVSFGDEELTVLDLENYDFAGINIAIFCAGSHVS ERYVPIATEAGCIVVDNTSHFRMKEGVPLVIPEINKDKITEYKNHNIISNPNCTTIQMLLALHLLHQKAKIKRIVASTYQ STSGVGKAAMDELYNQTKKIFMNEAKKPEIFPKQIAFNCIPHIGEFMEDGSTKEEWKMQEEAKKILEEDIKVTATCVRVP VLVGHAIAVNVEFDQHITEEEAREMLSEDDGVLVQDKREDGGYMTQIDVVQENAVYISRIRQDDTVKHGLNMWIVADNLR KGAALNIVQILEILIKEHL
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=342, Percent_Identity=34.5029239766082, Blast_Score=207, Evalue=7e-55, Organism=Escherichia coli, GI1789841, Length=366, Percent_Identity=25.1366120218579, Blast_Score=98, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR005986 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: =1.2.1.11 [H]
Molecular weight: Translated: 38043; Mature: 37912
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCKIAVIGATGRVGYEVLTMLAEFQKEGKFSIDSVVAFASKKSKGKKVSFGDEELTVLD CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCCEEEEE LENYDFAGINIAIFCAGSHVSERYVPIATEAGCIVVDNTSHFRMKEGVPLVIPEINKDKI ECCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCCEEECCCCEEEECCCCHHHH TEYKNHNIISNPNCTTIQMLLALHLLHQKAKIKRIVASTYQSTSGVGKAAMDELYNQTKK HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IFMNEAKKPEIFPKQIAFNCIPHIGEFMEDGSTKEEWKMQEEAKKILEEDIKVTATCVRV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVLVGHAIAVNVEFDQHITEEEAREMLSEDDGVLVQDKREDGGYMTQIDVVQENAVYISR HHHCCCEEEEEEEHHHHCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHH IRQDDTVKHGLNMWIVADNLRKGAALNIVQILEILIKEHL HCCCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GCKIAVIGATGRVGYEVLTMLAEFQKEGKFSIDSVVAFASKKSKGKKVSFGDEELTVLD CCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECCCCCCEEEEE LENYDFAGINIAIFCAGSHVSERYVPIATEAGCIVVDNTSHFRMKEGVPLVIPEINKDKI ECCCCCCCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCCEEECCCCEEEECCCCHHHH TEYKNHNIISNPNCTTIQMLLALHLLHQKAKIKRIVASTYQSTSGVGKAAMDELYNQTKK HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IFMNEAKKPEIFPKQIAFNCIPHIGEFMEDGSTKEEWKMQEEAKKILEEDIKVTATCVRV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVLVGHAIAVNVEFDQHITEEEAREMLSEDDGVLVQDKREDGGYMTQIDVVQENAVYISR HHHCCCEEEEEEEHHHHCCHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHH IRQDDTVKHGLNMWIVADNLRKGAALNIVQILEILIKEHL HCCCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA