Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570870
Identifier: 190570870
GI number: 190570870
Start: 478614
End: 479120
Strand: Direct
Name: 190570870
Synonym: WPa_0446
Alternate gene names: NA
Gene position: 478614-479120 (Clockwise)
Preceding gene: 190570869
Following gene: 190570871
Centisome position: 32.29
GC content: 36.29
Gene sequence:
>507_bases ATGTTACCGAAGATTTTAAAGAATTTTAATGTATTCGTAGATGGTCGTGGTTATGCAGGAAAAATAGATGAAATAACCTT GCCAAAACTTACCATAAAAACAGAAGAGTATCGTGCTGGTGGTATGGATATTCCAATAAACATCGATATGGGCATGGAAA AGCTTGAAGCTGAGTTTACTTTTGCTGAATATGATACAGAGCTATTTCGGCTATTTGGGTTGATAAATGGAAATTCAGTA TCTTTAACTCTTCGTGGTGGTATGCAAGGCAGTGGTAGCAATGATATAGAAGCAGTAGTAATAAACCTTAGAGGAGTATT TAGAGAATTTGATTTTGGTAGCTGGAAACCTGCTGAGAAAGCAACGCTGAAATGTACTGTAGCTGCCCATTACTATAAAC TTACTATAGGCGGTAATGAGCTGATAGAAATCGATGCTGAAAATATGGTTAGAAAGATAAATGGTGTTGATCAAATGGCA CTACTTCAGACGGTTTTAGGCATATAA
Upstream 100 bases:
>100_bases ATATTTTGATTTCGAATTTACACCACCATATCCAGCAGAACAGATTACTTTCAGGTCACACCTGGTGAGTGGTACAATAT TATAAAAATGGGAGAAAGAG
Downstream 100 bases:
>100_bases AAACATATTTGAAATTTTATTTTTAAGGAGGCGATAATGCACACTATAATACTTAATAACCCAATAACAGTTGACGGGAT TTCTGTCTCAGAATTATCGA
Product: Phage tail tube protein
Products: NA
Alternate protein names: Tail Tube Protein; Phage Tail Tube Protein FII; Phage-Related Tail Tube Protein; Bacteriophage Tail Core Protein; Contractile Tail Tube Protein; Tail Fiber Component Of Prophage; Phage Tail Tube Protein; Tail Tube Protein FII; Pyocin R2_PP Tail Tube Protein GpFII; Phage-Related Tail Protein; Prophage Tail Tube Protein; Phage P2 FII-Like Protein; Bacteriophage Tail Tube Protein FII; Bacteriophage-Related Tail Tube FII Protein; Prophage; Bacteriophage P2 Tail Sheath Protein GPFII; Phage Tail Protein; Phage Tail Tube-Like Protein; Phage Tail Core Protein; Pyocin R2_PP Tail Tube Protein; Tail Tube Protein Prophage
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MLPKILKNFNVFVDGRGYAGKIDEITLPKLTIKTEEYRAGGMDIPINIDMGMEKLEAEFTFAEYDTELFRLFGLINGNSV SLTLRGGMQGSGSNDIEAVVINLRGVFREFDFGSWKPAEKATLKCTVAAHYYKLTIGGNELIEIDAENMVRKINGVDQMA LLQTVLGI
Sequences:
>Translated_168_residues MLPKILKNFNVFVDGRGYAGKIDEITLPKLTIKTEEYRAGGMDIPINIDMGMEKLEAEFTFAEYDTELFRLFGLINGNSV SLTLRGGMQGSGSNDIEAVVINLRGVFREFDFGSWKPAEKATLKCTVAAHYYKLTIGGNELIEIDAENMVRKINGVDQMA LLQTVLGI >Mature_168_residues MLPKILKNFNVFVDGRGYAGKIDEITLPKLTIKTEEYRAGGMDIPINIDMGMEKLEAEFTFAEYDTELFRLFGLINGNSV SLTLRGGMQGSGSNDIEAVVINLRGVFREFDFGSWKPAEKATLKCTVAAHYYKLTIGGNELIEIDAENMVRKINGVDQMA LLQTVLGI
Specific function: Unknown
COG id: COG3498
COG function: function code R; Phage tail tube protein FII
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18632; Mature: 18632
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPKILKNFNVFVDGRGYAGKIDEITLPKLTIKTEEYRAGGMDIPINIDMGMEKLEAEFT CCCHHHCCCEEEEECCCCCCCCCCEECCEEEEEEHHHCCCCEEEEEECCCCCHHHHHEEE FAEYDTELFRLFGLINGNSVSLTLRGGMQGSGSNDIEAVVINLRGVFREFDFGSWKPAEK EEHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCC ATLKCTVAAHYYKLTIGGNELIEIDAENMVRKINGVDQMALLQTVLGI CEEEEEEEEEEEEEEECCCEEEEECHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MLPKILKNFNVFVDGRGYAGKIDEITLPKLTIKTEEYRAGGMDIPINIDMGMEKLEAEFT CCCHHHCCCEEEEECCCCCCCCCCEECCEEEEEEHHHCCCCEEEEEECCCCCHHHHHEEE FAEYDTELFRLFGLINGNSVSLTLRGGMQGSGSNDIEAVVINLRGVFREFDFGSWKPAEK EEHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCCEEEEEEEEHHHHHHCCCCCCCCCCC ATLKCTVAAHYYKLTIGGNELIEIDAENMVRKINGVDQMALLQTVLGI CEEEEEEEEEEEEEEECCCEEEEECHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA