Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570869
Identifier: 190570869
GI number: 190570869
Start: 477420
End: 478598
Strand: Direct
Name: 190570869
Synonym: WPa_0445
Alternate gene names: NA
Gene position: 477420-478598 (Clockwise)
Preceding gene: 190570868
Following gene: 190570870
Centisome position: 32.2
GC content: 37.32
Gene sequence:
>1179_bases ATGGCTGAAGAATTTTTACACGGAGTAAATGTTATAGAGGTAACCTCAGGGGCAAAAACAGTACGTACAGCTAAATCATC AGTGATAGGTGTAATTGGTACCGCACCTGAAGCAGATGGGCAAAAATTTCCACTGAATAAACCAGTGTTAATTGCAGGAA GCTTGAAGGAAGCAGCAAAGCTTGGAAAGAGTGGAAGTTTACCTTCTGCAGTAAATGGAATATTTTCCCAGATTGGTGTA ACAGTTATAGTAATTAGAGTTGAAGAGAGTGAAAACAGCGATCCAAAATTAAAAGAAGAAGAGACGCTGAAGAATATAAT TGGCGGTGTTGATAAAGAGACTGGAGAGTATCAAGGGATAGAGGCATTCCTCAACAGTGAAAGTATAGTTCATGTTGCTC CAAGAATATTAATTGCTCCTCAATTTACTCATCAATTGCCTGAATCTAAAAACCCAGTAGTAGCAGCTTTGATAGGAGTA GCAGAAAAGCTAAGAAGCATAATAGTAGCAGATGGTCCAAATACCAATGATGAAGAAGTAATAAAATGGAGAAAAAGTGT AGGCAGCTCAAGAGTTTACGTAGTTGATCCTTGGGTTAAGGTATTTATTGAAGGAAAAGAAGAAATTTTGCCAGTAAGCC CATTTGTAGCTGGTTTAATAGCGAAAGTAGATAGTGAGCAAGGATTTTGGCATTCACCTTCAAACAAAGAGATAAATGGT ATTGTTGGAACAAGCAGGCCTATTGATTTTACGCTCGGTAATACAAATTGTAGAGCAAACCACTTGAATGAAAATGAAGT AACAACGATAATTCATCAAAATGGCTATAGGCTTTGGGGAAATAGAACATGTTCAAATGACTCAAAATGGGCTTTTCTGT CAGTGAGAAGGACTGCAGATTTAATCAATGATAGTTTACTTCGAGCTCATTTATGGGCAGTTGATCGCAATATCACCAAA ACTTATATAGATGATGTAATTGAGGGGGTGAATTCTTATTTGGCCAATTTAAAAGCACAAGGAGCTATTATTAGCGGAAA ATGTTATGCAACACCTGAACTCAATACACCGGCAAATATTGCAAGCGGGAAAGTATATTTTGATTTCGAATTTACACCAC CATATCCAGCAGAACAGATTACTTTCAGGTCACACCTGGTGAGTGGTACAATATTATAA
Upstream 100 bases:
>100_bases GAAGAGTTGGAAGACATTACCAAGAAGAAAATTGCAGAAGCCAAAAGTAAAAATGAGCTAGAGAACTTACTAAACGATTT TAAACAAAAGATACAAAGAA
Downstream 100 bases:
>100_bases AAATGGGAGAAAGAGATGTTACCGAAGATTTTAAAGAATTTTAATGTATTCGTAGATGGTCGTGGTTATGCAGGAAAAAT AGATGAAATAACCTTGCCAA
Product: Phage major tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Bacteriophage Tail Sheath Protein; Tail Sheath Protein FI; Phage Tail Sheath Protein; Phage-Related Tail Sheath Protein; Bacteriophage Tail Sheath Protein; LOW QUALITY PROTEIN Phage Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Phage Tail Sheath-Like Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Phage Tail-Like Protein; Tail Sheath Protein Bacteriophage; Bacteriophage P2 Tail Sheath Protein GPFI; Phage Tail Sheath Protein FI-Like Protein; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MAEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADGQKFPLNKPVLIAGSLKEAAKLGKSGSLPSAVNGIFSQIGV TVIVIRVEESENSDPKLKEEETLKNIIGGVDKETGEYQGIEAFLNSESIVHVAPRILIAPQFTHQLPESKNPVVAALIGV AEKLRSIIVADGPNTNDEEVIKWRKSVGSSRVYVVDPWVKVFIEGKEEILPVSPFVAGLIAKVDSEQGFWHSPSNKEING IVGTSRPIDFTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDSKWAFLSVRRTADLINDSLLRAHLWAVDRNITK TYIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANIASGKVYFDFEFTPPYPAEQITFRSHLVSGTIL
Sequences:
>Translated_392_residues MAEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADGQKFPLNKPVLIAGSLKEAAKLGKSGSLPSAVNGIFSQIGV TVIVIRVEESENSDPKLKEEETLKNIIGGVDKETGEYQGIEAFLNSESIVHVAPRILIAPQFTHQLPESKNPVVAALIGV AEKLRSIIVADGPNTNDEEVIKWRKSVGSSRVYVVDPWVKVFIEGKEEILPVSPFVAGLIAKVDSEQGFWHSPSNKEING IVGTSRPIDFTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDSKWAFLSVRRTADLINDSLLRAHLWAVDRNITK TYIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANIASGKVYFDFEFTPPYPAEQITFRSHLVSGTIL >Mature_391_residues AEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADGQKFPLNKPVLIAGSLKEAAKLGKSGSLPSAVNGIFSQIGVT VIVIRVEESENSDPKLKEEETLKNIIGGVDKETGEYQGIEAFLNSESIVHVAPRILIAPQFTHQLPESKNPVVAALIGVA EKLRSIIVADGPNTNDEEVIKWRKSVGSSRVYVVDPWVKVFIEGKEEILPVSPFVAGLIAKVDSEQGFWHSPSNKEINGI VGTSRPIDFTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDSKWAFLSVRRTADLINDSLLRAHLWAVDRNITKT YIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANIASGKVYFDFEFTPPYPAEQITFRSHLVSGTIL
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42672; Mature: 42541
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADGQKFPLNKPVLIAGSLKEAAK CCCHHHCCCCEEEEECCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHH LGKSGSLPSAVNGIFSQIGVTVIVIRVEESENSDPKLKEEETLKNIIGGVDKETGEYQGI CCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH EAFLNSESIVHVAPRILIAPQFTHQLPESKNPVVAALIGVAEKLRSIIVADGPNTNDEEV HHHHCCCCEEEECCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHH IKWRKSVGSSRVYVVDPWVKVFIEGKEEILPVSPFVAGLIAKVDSEQGFWHSPSNKEING HHHHHHCCCCEEEEECHHHEEEECCCHHEEECCHHHHHHHHHCCCCCCCEECCCCCCCCE IVGTSRPIDFTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDSKWAFLSVRRTAD EECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEEEHHHHH LINDSLLRAHLWAVDRNITKTYIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCCCCC ASGKVYFDFEFTPPYPAEQITFRSHLVSGTIL CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AEEFLHGVNVIEVTSGAKTVRTAKSSVIGVIGTAPEADGQKFPLNKPVLIAGSLKEAAK CCHHHCCCCEEEEECCCHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEECCHHHHHH LGKSGSLPSAVNGIFSQIGVTVIVIRVEESENSDPKLKEEETLKNIIGGVDKETGEYQGI CCCCCCCCHHHHHHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHH EAFLNSESIVHVAPRILIAPQFTHQLPESKNPVVAALIGVAEKLRSIIVADGPNTNDEEV HHHHCCCCEEEECCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHEEEEECCCCCCHHHH IKWRKSVGSSRVYVVDPWVKVFIEGKEEILPVSPFVAGLIAKVDSEQGFWHSPSNKEING HHHHHHCCCCEEEEECHHHEEEECCCHHEEECCHHHHHHHHHCCCCCCCEECCCCCCCCE IVGTSRPIDFTLGNTNCRANHLNENEVTTIIHQNGYRLWGNRTCSNDSKWAFLSVRRTAD EECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCEEEEEEHHHHH LINDSLLRAHLWAVDRNITKTYIDDVIEGVNSYLANLKAQGAIISGKCYATPELNTPANI HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEECCCCCCCCCC ASGKVYFDFEFTPPYPAEQITFRSHLVSGTIL CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA