Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570842
Identifier: 190570842
GI number: 190570842
Start: 449950
End: 450285
Strand: Reverse
Name: 190570842
Synonym: WPa_0417
Alternate gene names: NA
Gene position: 450285-449950 (Counterclockwise)
Preceding gene: 190570843
Following gene: 190570841
Centisome position: 30.37
GC content: 33.63
Gene sequence:
>336_bases ATGAAGGGTATGGATGCTAAAACAGGAAAAACGTTAGAAGGAATAGAGCACTTAAAGCAGTCGATAATTGATATACTGAC CACTCCTATTAACAGTAGAATAATGAGGAGAGATTATGGTTCTCGATTATTTGAATTAGTAGATAAGTCAATAAATAGAG ATCTAACTTTGGAAATCTATTCAGCAGTAGCAGAAGCTCTACAAAGGTGGGAGGAAAGATTTAAGCTAGAAAAAGTAAAA ATGACAGAGGTGAAAGAAGGAAAAGTAACGCTTGATCTAGAAGGATTATACTTACCAAGCGGGAAAAACATTCATTTTGA TGAAATTGTAGTTTAA
Upstream 100 bases:
>100_bases CAGTGTTTGCAAATGGTCTTAGTGTAGGAAGAGTAGGAGATATAGTTTCATGTGGGTTTAAAGTAATAAAAGGCAGTGAA AGCGTTTTTGCAAAATAGAA
Downstream 100 bases:
>100_bases AGATGAAGCAGCTAAATATTGTAGAAAAGCTGAGTTATGAAGAAATCTTTTCGAGAATGAAGGAAGAGTTAGTAAAGCGA GATGCAAGTTTTACAGGATT
Product: baseplate assembly protein GpW
Products: NA
Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Bacteriophage P2 Baseplate Assembly Protein GPW; Bacteriophage Baseplate Assembly Protein W; Phage Baseplate Assembly Protein W; Phage P2 Baseplate Assembly GpW-Like Protein; Phage Baseplate Assembly; GpW/GP25 Family Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly W Protein; Phage-Related Baseplate Protein; Phage Protein Gp; Baseplate Assembly Protein; Prophage Baseplate Protein; Baseplate Assembly Protein W Prophage; Prophage LambdaW1 Baseplate Assembly Protein W
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MKGMDAKTGKTLEGIEHLKQSIIDILTTPINSRIMRRDYGSRLFELVDKSINRDLTLEIYSAVAEALQRWEERFKLEKVK MTEVKEGKVTLDLEGLYLPSGKNIHFDEIVV
Sequences:
>Translated_111_residues MKGMDAKTGKTLEGIEHLKQSIIDILTTPINSRIMRRDYGSRLFELVDKSINRDLTLEIYSAVAEALQRWEERFKLEKVK MTEVKEGKVTLDLEGLYLPSGKNIHFDEIVV >Mature_111_residues MKGMDAKTGKTLEGIEHLKQSIIDILTTPINSRIMRRDYGSRLFELVDKSINRDLTLEIYSAVAEALQRWEERFKLEKVK MTEVKEGKVTLDLEGLYLPSGKNIHFDEIVV
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12796; Mature: 12796
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMDAKTGKTLEGIEHLKQSIIDILTTPINSRIMRRDYGSRLFELVDKSINRDLTLEIY CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SAVAEALQRWEERFKLEKVKMTEVKEGKVTLDLEGLYLPSGKNIHFDEIVV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHCC >Mature Secondary Structure MKGMDAKTGKTLEGIEHLKQSIIDILTTPINSRIMRRDYGSRLFELVDKSINRDLTLEIY CCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH SAVAEALQRWEERFKLEKVKMTEVKEGKVTLDLEGLYLPSGKNIHFDEIVV HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA