Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
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Accession | NC_010981 |
Length | 1,482,455 |
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The map label for this gene is 190570841
Identifier: 190570841
GI number: 190570841
Start: 449162
End: 449947
Strand: Reverse
Name: 190570841
Synonym: WPa_0416
Alternate gene names: NA
Gene position: 449947-449162 (Counterclockwise)
Preceding gene: 190570842
Following gene: 190570840
Centisome position: 30.35
GC content: 34.86
Gene sequence:
>786_bases ATGAAGCAGCTAAATATTGTAGAAAAGCTGAGTTATGAAGAAATCTTTTCGAGAATGAAGGAAGAGTTAGTAAAGCGAGA TGCAAGTTTTACAGGATTGGTAGAAAGTGATCCAGCAATGAAGGTATTAGAAGTAGCAGCATGGCGAGAACTTTTACTCA GACAAAGGATAAACGAAGCTGTAAAGGGTAATTTACTTAAATTTGCAACAGGAGAAGATCTTGACTCTTTAGCTGAATTT TATGGAGTAGAGAGGCAAAATGAAGAAGATGATGAACATTTTAGAAAAAGAATAAAAGCAAAAATAGCAGGTTGGTCAAC AGGAGGAAGTAAGGAATATTATAAATATCATGCACTGTCAGCAGATAGTAGAGTAAAAGATGCACTAGTAGAATCACCTA TACCAGGAAAAGTACAAATTTCAATCTTATCAACACAAACTGGCATATTGTCAGAAGAGCTACTAGAAATTGTAAAAAAG CAGGTTACTAGAGATGATATAAGGGTTTTAACAGATACAGTAACAGTAGTTGGTTGCAATATTACGGAAATAGATATTCA CAGCAGAATGAGCATAAGTCCTGTAATATCGAAGGAGGAAATCAAGAAGCAGTTTATTGAGAAGTTTGAATTAGCAAAAA GATTAGGGTGGAGTGTAACAAGATCGTGGATAATAGCGAATCTATTTGTAGATGGTGTAGAAAACGTAGAATTAATCGAG CCAAAAGAGGATGTTGTGGTGCTAGGTAACGAGTGTGCAAATTTGCGAAATTTAAAGATTGAGTAA
Upstream 100 bases:
>100_bases AAATGACAGAGGTGAAAGAAGGAAAAGTAACGCTTGATCTAGAAGGATTATACTTACCAAGCGGGAAAAACATTCATTTT GATGAAATTGTAGTTTAAAG
Downstream 100 bases:
>100_bases TGCTATTACCCCCAAACGCGACAAAGCAAGAGCAAGCATTGGTTGATGCAATCGATTACAAAGTTGATCCAAGTTGCATC AGGAGATTTAAATTTAGTCT
Product: baseplate assembly protein GpJ
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Phage Baseplate Assembly Protein; Baseplate J-Like Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Phage Protein Gp; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate J-Like Protein; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly-Like Protein; Phage Baseplate Assembly; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Tail Protein; Phage Baseplate-Like Protein
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKQLNIVEKLSYEEIFSRMKEELVKRDASFTGLVESDPAMKVLEVAAWRELLLRQRINEAVKGNLLKFATGEDLDSLAEF YGVERQNEEDDEHFRKRIKAKIAGWSTGGSKEYYKYHALSADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKK QVTRDDIRVLTDTVTVVGCNITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE PKEDVVVLGNECANLRNLKIE
Sequences:
>Translated_261_residues MKQLNIVEKLSYEEIFSRMKEELVKRDASFTGLVESDPAMKVLEVAAWRELLLRQRINEAVKGNLLKFATGEDLDSLAEF YGVERQNEEDDEHFRKRIKAKIAGWSTGGSKEYYKYHALSADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKK QVTRDDIRVLTDTVTVVGCNITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE PKEDVVVLGNECANLRNLKIE >Mature_261_residues MKQLNIVEKLSYEEIFSRMKEELVKRDASFTGLVESDPAMKVLEVAAWRELLLRQRINEAVKGNLLKFATGEDLDSLAEF YGVERQNEEDDEHFRKRIKAKIAGWSTGGSKEYYKYHALSADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKK QVTRDDIRVLTDTVTVVGCNITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE PKEDVVVLGNECANLRNLKIE
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29712; Mature: 29712
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLNIVEKLSYEEIFSRMKEELVKRDASFTGLVESDPAMKVLEVAAWRELLLRQRINEA CCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKGNLLKFATGEDLDSLAEFYGVERQNEEDDEHFRKRIKAKIAGWSTGGSKEYYKYHALS HHCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEEEECC ADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKKQVTRDDIRVLTDTVTVVGCN CCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECC ITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEC PKEDVVVLGNECANLRNLKIE CCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MKQLNIVEKLSYEEIFSRMKEELVKRDASFTGLVESDPAMKVLEVAAWRELLLRQRINEA CCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VKGNLLKFATGEDLDSLAEFYGVERQNEEDDEHFRKRIKAKIAGWSTGGSKEYYKYHALS HHCCEEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHEEEECC ADSRVKDALVESPIPGKVQISILSTQTGILSEELLEIVKKQVTRDDIRVLTDTVTVVGCN CCHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECC ITEIDIHSRMSISPVISKEEIKKQFIEKFELAKRLGWSVTRSWIIANLFVDGVENVELIE EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEC PKEDVVVLGNECANLRNLKIE CCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA