Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
---|---|
Accession | NC_010981 |
Length | 1,482,455 |
Click here to switch to the map view.
The map label for this gene is 190570790
Identifier: 190570790
GI number: 190570790
Start: 369386
End: 371752
Strand: Direct
Name: 190570790
Synonym: WPa_0350
Alternate gene names: NA
Gene position: 369386-371752 (Clockwise)
Preceding gene: 190570784
Following gene: 190570791
Centisome position: 24.92
GC content: 33.0
Gene sequence:
>2367_bases ATGGTACATTCATCTGCGCAAATATTCACAAAGTTTGATAACGATTCAAAACAGAGAAATATAGAAGGGCTAGAAAAGAC TTACTTGGGAGTCTTGCTGTCAATTGAATTAAATAGCAAAACTTCTCAAATTGCGAAGGGCATTAAAGAAAAAATAGAAA GTTTGTTGAGTAGCAATAAAGATGCAATAAATGATAAAGTAACAATAGGTGAAAGAGAAATTAGTGTAACTTTAACGAAG AAGGAAGAAGGTACATACAGTGTTAAATTTGATGAAAGTGATCCTTCTTCGGTAGATATTAAAGATACGAAAGATTACAC TGCCGAGGATCTACTTACTTTGTGCACACAGCATGAGTTGACAATCAGCAGAGATAAGAAAGGTAATCACCATTATAGTG TAACAATCAAAGGTAAAGAAAAAAGTGCAACAGTAGGTGGGCCTGGTAAAATTGTAATATTTCCACAACATTTATCTTAC ATCAAAGAAACAATAGAACACTTAAAAGAAGGTAAGAGTCCAACTAAAGAGTTTGCACTTGCAACAGGAACTGGAAAAAC ATTCATAGAATTACTTGTTGAATATTTGCCTGCTAGGCTAATCGGTGTACCTTATATATCCCTAGCACCTAATGAAGATC TTGTAACACAGAAACGTGATGATTGGAAAAAAGTATTATCTGACTCCGATATTGAAGATATTGAGTTGAAAGAGATAAGC GGTGATAAAGGGTGCTCTATATTGAGCAGCGAAAGCTTGATGAAAAATTGGAATCAATTTTTAGAGGTAATAGGTCTTGG ACAGCTTCCTGATATTATAAACGCTCTTAATATTGGAGACAAAAGATTTGAAATAAGAAATGGAAAAATAAACGTAGATG GCAAAGATTTTTTGATTCTTGCAGATAAAATTCAATTTGGAGATAAGGAATATAAAATTCAAGATGGTAAAGTTACAATT GATGATCAAGAATTTGGGCTAAATATTGAAAAATCTATATCTCTATCCTTTGATGAAGAGCACCGAGTGGCAGAGCAGGA GTTGTATAAACACCGTATGGGAATCTTATCTGCACTTGTGCCTACACTGTTTTTAAGTGCAACGCCTTCAATAAGCACTC ATAAATATATTAGAGAAAATGATGGTTTACTTAAAACTCTTTCTTTGACAGATAAAATGAAGTCAGGTGTGTATGGAGAT TTAAATCTACAAGTTCATACAAAAGTAAAAAGTAAAAATCTAGCAAAGGAATACTCTAATGGCGTTGAAGAGTATGTAGA TTTCAAGAAGGAAGAAAAAGATAAATATAGCGATAAAATTTTAACAGAAGGTGAGTTAAAAGAAGAAGTAGAGAATTATC TGTATAGAAATGTTCAAAGCGTAATTGGTGAACCAGCGTTGATTTTAGCTGAGTCAAATAAGCAGATAGATAACCTGAAA GAAATATTGCAATATGGTAGAAACGAAACCTTACCAAAGTTTAGTAAATCGAAGATTTATGATTTCTTAGAGCGAATGTT CGAACCTAAACCGGGCTATAAGTTAGTAACCCAGTCAAAAAAGTTTGCTCTCATAACAGAGCAAGTTGCTAAGCAGTTCA ATATTACAAAAGAAAAAGCAGAAAAAATTGTGAAAGAATATTATGATTTCAGTGGCATTGCAGATTATTCTGTATTTCGC GTAATGCATGGAATAATTGAGAATACACTTTCATGCTTAACTGGTCTAAACAGACACGAGCTTGATGAAAAGAGGTGTGC AGATTTGAAAGGCTTAGCTGGAGAAGTTAAAGCGGCGTTAGATAATACTCATGATTTAGAAATATATGTTAAAGATCAAG GTGTTCAAAGCGATAAATTAAAGAAAGAGCTTGTTCAGCAAATGCAATCTGTAATTAATGTTCTAAAGGAAAATAAAGGC TCTGATTTGTTTATAAGGTTAATAAGAAATTGGAACCAAGATAAAAAACTTCACCTCTTGATGTCATCTAAAGAATTAGA ACAAATTCCTGAAAAGCTGGTAGCTTTGCTAAGTAGAGGCAATTACTCTGTAGTGAGAGATTATCTTGAATATTATGGAG TAGAAGAAAGTAAAATAGATGACTTATGTGAACTGGGAAAAGAAGCATCTGCTGAAAGAAGAAAGTTTATGAATTCTTTA AGAGGGTTGAGTGATAAAGAACAAGATGAGCTCGCAAGATCTACACCTCTAGGAGGAAATGAGAAAAAACTACTTGAAGA TCTTGGGAAAGCGCTTAAAATGATATTAAAAAATGGTAGTAAGCTAACTTATTCAGACTATTCTAGTTCTTCGTATTCTT GTGATGAAAAAGCATATCCATTAGGAGCACTACAAGATTTTTGTTAA
Upstream 100 bases:
>100_bases AATTTATGACTATTTTATAATTCATTAATGAAATATCTTGATAAATTATCTAATCTCGTATATTATTAGAATATTAACAC TGTATTTTAAAGGTAAAAAC
Downstream 100 bases:
>100_bases GAAAATAAGCACAAAGTAAAATTAGAAAATTTAAATCGCTCAGGCAATTTATCTGTAGAAGATCTTAAGAGTAAGCTTTC AGACTATATAAGTGGCCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 788; Mature: 788
Protein sequence:
>788_residues MVHSSAQIFTKFDNDSKQRNIEGLEKTYLGVLLSIELNSKTSQIAKGIKEKIESLLSSNKDAINDKVTIGEREISVTLTK KEEGTYSVKFDESDPSSVDIKDTKDYTAEDLLTLCTQHELTISRDKKGNHHYSVTIKGKEKSATVGGPGKIVIFPQHLSY IKETIEHLKEGKSPTKEFALATGTGKTFIELLVEYLPARLIGVPYISLAPNEDLVTQKRDDWKKVLSDSDIEDIELKEIS GDKGCSILSSESLMKNWNQFLEVIGLGQLPDIINALNIGDKRFEIRNGKINVDGKDFLILADKIQFGDKEYKIQDGKVTI DDQEFGLNIEKSISLSFDEEHRVAEQELYKHRMGILSALVPTLFLSATPSISTHKYIRENDGLLKTLSLTDKMKSGVYGD LNLQVHTKVKSKNLAKEYSNGVEEYVDFKKEEKDKYSDKILTEGELKEEVENYLYRNVQSVIGEPALILAESNKQIDNLK EILQYGRNETLPKFSKSKIYDFLERMFEPKPGYKLVTQSKKFALITEQVAKQFNITKEKAEKIVKEYYDFSGIADYSVFR VMHGIIENTLSCLTGLNRHELDEKRCADLKGLAGEVKAALDNTHDLEIYVKDQGVQSDKLKKELVQQMQSVINVLKENKG SDLFIRLIRNWNQDKKLHLLMSSKELEQIPEKLVALLSRGNYSVVRDYLEYYGVEESKIDDLCELGKEASAERRKFMNSL RGLSDKEQDELARSTPLGGNEKKLLEDLGKALKMILKNGSKLTYSDYSSSSYSCDEKAYPLGALQDFC
Sequences:
>Translated_788_residues MVHSSAQIFTKFDNDSKQRNIEGLEKTYLGVLLSIELNSKTSQIAKGIKEKIESLLSSNKDAINDKVTIGEREISVTLTK KEEGTYSVKFDESDPSSVDIKDTKDYTAEDLLTLCTQHELTISRDKKGNHHYSVTIKGKEKSATVGGPGKIVIFPQHLSY IKETIEHLKEGKSPTKEFALATGTGKTFIELLVEYLPARLIGVPYISLAPNEDLVTQKRDDWKKVLSDSDIEDIELKEIS GDKGCSILSSESLMKNWNQFLEVIGLGQLPDIINALNIGDKRFEIRNGKINVDGKDFLILADKIQFGDKEYKIQDGKVTI DDQEFGLNIEKSISLSFDEEHRVAEQELYKHRMGILSALVPTLFLSATPSISTHKYIRENDGLLKTLSLTDKMKSGVYGD LNLQVHTKVKSKNLAKEYSNGVEEYVDFKKEEKDKYSDKILTEGELKEEVENYLYRNVQSVIGEPALILAESNKQIDNLK EILQYGRNETLPKFSKSKIYDFLERMFEPKPGYKLVTQSKKFALITEQVAKQFNITKEKAEKIVKEYYDFSGIADYSVFR VMHGIIENTLSCLTGLNRHELDEKRCADLKGLAGEVKAALDNTHDLEIYVKDQGVQSDKLKKELVQQMQSVINVLKENKG SDLFIRLIRNWNQDKKLHLLMSSKELEQIPEKLVALLSRGNYSVVRDYLEYYGVEESKIDDLCELGKEASAERRKFMNSL RGLSDKEQDELARSTPLGGNEKKLLEDLGKALKMILKNGSKLTYSDYSSSSYSCDEKAYPLGALQDFC >Mature_788_residues MVHSSAQIFTKFDNDSKQRNIEGLEKTYLGVLLSIELNSKTSQIAKGIKEKIESLLSSNKDAINDKVTIGEREISVTLTK KEEGTYSVKFDESDPSSVDIKDTKDYTAEDLLTLCTQHELTISRDKKGNHHYSVTIKGKEKSATVGGPGKIVIFPQHLSY IKETIEHLKEGKSPTKEFALATGTGKTFIELLVEYLPARLIGVPYISLAPNEDLVTQKRDDWKKVLSDSDIEDIELKEIS GDKGCSILSSESLMKNWNQFLEVIGLGQLPDIINALNIGDKRFEIRNGKINVDGKDFLILADKIQFGDKEYKIQDGKVTI DDQEFGLNIEKSISLSFDEEHRVAEQELYKHRMGILSALVPTLFLSATPSISTHKYIRENDGLLKTLSLTDKMKSGVYGD LNLQVHTKVKSKNLAKEYSNGVEEYVDFKKEEKDKYSDKILTEGELKEEVENYLYRNVQSVIGEPALILAESNKQIDNLK EILQYGRNETLPKFSKSKIYDFLERMFEPKPGYKLVTQSKKFALITEQVAKQFNITKEKAEKIVKEYYDFSGIADYSVFR VMHGIIENTLSCLTGLNRHELDEKRCADLKGLAGEVKAALDNTHDLEIYVKDQGVQSDKLKKELVQQMQSVINVLKENKG SDLFIRLIRNWNQDKKLHLLMSSKELEQIPEKLVALLSRGNYSVVRDYLEYYGVEESKIDDLCELGKEASAERRKFMNSL RGLSDKEQDELARSTPLGGNEKKLLEDLGKALKMILKNGSKLTYSDYSSSSYSCDEKAYPLGALQDFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89279; Mature: 89279
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHSSAQIFTKFDNDSKQRNIEGLEKTYLGVLLSIELNSKTSQIAKGIKEKIESLLSSNK CCCCCCHHEEECCCCCHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCC DAINDKVTIGEREISVTLTKKEEGTYSVKFDESDPSSVDIKDTKDYTAEDLLTLCTQHEL CCCCCCEEECCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCE TISRDKKGNHHYSVTIKGKEKSATVGGPGKIVIFPQHLSYIKETIEHLKEGKSPTKEFAL EEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHEE ATGTGKTFIELLVEYLPARLIGVPYISLAPNEDLVTQKRDDWKKVLSDSDIEDIELKEIS ECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCHHHHHHHHCCCCCCCCCCEECC GDKGCSILSSESLMKNWNQFLEVIGLGQLPDIINALNIGDKRFEIRNGKINVDGKDFLIL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEEECCCEEEEE ADKIQFGDKEYKIQDGKVTIDDQEFGLNIEKSISLSFDEEHRVAEQELYKHRMGILSALV EECCCCCCCCEEEECCEEEECCHHHCCCEECCEEECCCHHHHHHHHHHHHHHHHHHHHHH PTLFLSATPSISTHKYIRENDGLLKTLSLTDKMKSGVYGDLNLQVHTKVKSKNLAKEYSN HHHHHHCCCCCCHHHHHHCCCCCEEEHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHH GVEEYVDFKKEEKDKYSDKILTEGELKEEVENYLYRNVQSVIGEPALILAESNKQIDNLK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH EILQYGRNETLPKFSKSKIYDFLERMFEPKPGYKLVTQSKKFALITEQVAKQFNITKEKA HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHH EKIVKEYYDFSGIADYSVFRVMHGIIENTLSCLTGLNRHELDEKRCADLKGLAGEVKAAL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH DNTHDLEIYVKDQGVQSDKLKKELVQQMQSVINVLKENKGSDLFIRLIRNWNQDKKLHLL CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE MSSKELEQIPEKLVALLSRGNYSVVRDYLEYYGVEESKIDDLCELGKEASAERRKFMNSL ECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHCHHHHHHHHHHH RGLSDKEQDELARSTPLGGNEKKLLEDLGKALKMILKNGSKLTYSDYSSSSYSCDEKAYP CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC LGALQDFC CHHHHHCC >Mature Secondary Structure MVHSSAQIFTKFDNDSKQRNIEGLEKTYLGVLLSIELNSKTSQIAKGIKEKIESLLSSNK CCCCCCHHEEECCCCCHHHHHHHHHHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHCCCC DAINDKVTIGEREISVTLTKKEEGTYSVKFDESDPSSVDIKDTKDYTAEDLLTLCTQHEL CCCCCCEEECCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCE TISRDKKGNHHYSVTIKGKEKSATVGGPGKIVIFPQHLSYIKETIEHLKEGKSPTKEFAL EEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHEE ATGTGKTFIELLVEYLPARLIGVPYISLAPNEDLVTQKRDDWKKVLSDSDIEDIELKEIS ECCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHCCHHHHHHHHCCCCCCCCCCEECC GDKGCSILSSESLMKNWNQFLEVIGLGQLPDIINALNIGDKRFEIRNGKINVDGKDFLIL CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEEECCCEEEEE ADKIQFGDKEYKIQDGKVTIDDQEFGLNIEKSISLSFDEEHRVAEQELYKHRMGILSALV EECCCCCCCCEEEECCEEEECCHHHCCCEECCEEECCCHHHHHHHHHHHHHHHHHHHHHH PTLFLSATPSISTHKYIRENDGLLKTLSLTDKMKSGVYGDLNLQVHTKVKSKNLAKEYSN HHHHHHCCCCCCHHHHHHCCCCCEEEHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHH GVEEYVDFKKEEKDKYSDKILTEGELKEEVENYLYRNVQSVIGEPALILAESNKQIDNLK HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH EILQYGRNETLPKFSKSKIYDFLERMFEPKPGYKLVTQSKKFALITEQVAKQFNITKEKA HHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHH EKIVKEYYDFSGIADYSVFRVMHGIIENTLSCLTGLNRHELDEKRCADLKGLAGEVKAAL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHH DNTHDLEIYVKDQGVQSDKLKKELVQQMQSVINVLKENKGSDLFIRLIRNWNQDKKLHLL CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEE MSSKELEQIPEKLVALLSRGNYSVVRDYLEYYGVEESKIDDLCELGKEASAERRKFMNSL ECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHCHHHHHHHHHHH RGLSDKEQDELARSTPLGGNEKKLLEDLGKALKMILKNGSKLTYSDYSSSSYSCDEKAYP CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCC LGALQDFC CHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA