| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499191
Identifier: 189499191
GI number: 189499191
Start: 202667
End: 203389
Strand: Direct
Name: 189499191
Synonym: Cphamn1_0207
Alternate gene names: NA
Gene position: 202667-203389 (Clockwise)
Preceding gene: 189499190
Following gene: 189499192
Centisome position: 7.41
GC content: 51.04
Gene sequence:
>723_bases ATGCGACTGAAAGAAATCGTTCCCTGGGGTCGATCGTTCAGGGAATACAGGGACATGTTTCTCCTCACCGATGACGATCT TCAAAAGACAATTCTCGGATGCGGGGACGGGCCCGCTGCCTTCAATGCGGAACTGACACAAGCCGGAGGAACGGTTGTTT CAGTTGATCCCGTCTATCGTTTCACCGTCGATCAGATCCGTTCACGGGTAGGTGAAGTCTATCCTGAAATCATGTCCGAA GTGTTGAAAAACCCTGATGATTACCTCTGGGATTCCATACGAGATGTTCGGCATCTCGCTCAGGTGAGAATGGATGCTAT GGAGCAGTTTTTCGATGACTGCGAGCAGGGGAAGAAAGCCGGCAGATATATCAACGCCTCTTTGCCTCAACTGCCGTTCA AAGACAGCGCATTCGACCTCGCCCTCTGCTCGCACTACCTTTTCCTTTACAGCGACCATGTGAGCCTCGAACAGCACATC AGTTCCATGAAGGAACTGTGCCGGGTAGCCTATGAGGTCAGGATTTATCCCCTTGTCACGCTCGCAGGAAAACGCTCGCC TCATCTCGATCCGGTTGTTTCAGAACTCAGAAATGACGGGTTCGAGGTTTCGTTTCACAAGGCAAAATACCGTTTTCAGA GAGGGGCGGAGGAGATGGTTGTTGTGAGAAGGATCGGTCTGGAGCAGCGACGTACTTGTACATCATATCCGGCTATTGTT TGA
Upstream 100 bases:
>100_bases CGGATTGTCGATGTGCTGGAGAAACTCCTGAGTGTGTAAGGATGTGTAGGGACGGGCCCCTGTGCCTGCCCGTTTTCGTT CAATCAGAGGCTGAGGTCTC
Downstream 100 bases:
>100_bases GTGCCGGGAGGAATGCGCTATATTTTACGGAGTTGTTCAGAAAATCTGTCAGACAGACAACCAGTGATGCTCGATGGCCA TCACGTACTACAAAAGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MRLKEIVPWGRSFREYRDMFLLTDDDLQKTILGCGDGPAAFNAELTQAGGTVVSVDPVYRFTVDQIRSRVGEVYPEIMSE VLKNPDDYLWDSIRDVRHLAQVRMDAMEQFFDDCEQGKKAGRYINASLPQLPFKDSAFDLALCSHYLFLYSDHVSLEQHI SSMKELCRVAYEVRIYPLVTLAGKRSPHLDPVVSELRNDGFEVSFHKAKYRFQRGAEEMVVVRRIGLEQRRTCTSYPAIV
Sequences:
>Translated_240_residues MRLKEIVPWGRSFREYRDMFLLTDDDLQKTILGCGDGPAAFNAELTQAGGTVVSVDPVYRFTVDQIRSRVGEVYPEIMSE VLKNPDDYLWDSIRDVRHLAQVRMDAMEQFFDDCEQGKKAGRYINASLPQLPFKDSAFDLALCSHYLFLYSDHVSLEQHI SSMKELCRVAYEVRIYPLVTLAGKRSPHLDPVVSELRNDGFEVSFHKAKYRFQRGAEEMVVVRRIGLEQRRTCTSYPAIV >Mature_240_residues MRLKEIVPWGRSFREYRDMFLLTDDDLQKTILGCGDGPAAFNAELTQAGGTVVSVDPVYRFTVDQIRSRVGEVYPEIMSE VLKNPDDYLWDSIRDVRHLAQVRMDAMEQFFDDCEQGKKAGRYINASLPQLPFKDSAFDLALCSHYLFLYSDHVSLEQHI SSMKELCRVAYEVRIYPLVTLAGKRSPHLDPVVSELRNDGFEVSFHKAKYRFQRGAEEMVVVRRIGLEQRRTCTSYPAIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27641; Mature: 27641
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKEIVPWGRSFREYRDMFLLTDDDLQKTILGCGDGPAAFNAELTQAGGTVVSVDPVYR CCCHHHCCCHHHHHHHHHEEEECCHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEECCHHH FTVDQIRSRVGEVYPEIMSEVLKNPDDYLWDSIRDVRHLAQVRMDAMEQFFDDCEQGKKA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRYINASLPQLPFKDSAFDLALCSHYLFLYSDHVSLEQHISSMKELCRVAYEVRIYPLVT CCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE LAGKRSPHLDPVVSELRNDGFEVSFHKAKYRFQRGAEEMVVVRRIGLEQRRTCTSYPAIV ECCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHCHHHHHHHHHHCHHHHHHHCCCCCCC >Mature Secondary Structure MRLKEIVPWGRSFREYRDMFLLTDDDLQKTILGCGDGPAAFNAELTQAGGTVVSVDPVYR CCCHHHCCCHHHHHHHHHEEEECCHHHHHHHHCCCCCCCCCCCHHHHCCCEEEEECCHHH FTVDQIRSRVGEVYPEIMSEVLKNPDDYLWDSIRDVRHLAQVRMDAMEQFFDDCEQGKKA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRYINASLPQLPFKDSAFDLALCSHYLFLYSDHVSLEQHISSMKELCRVAYEVRIYPLVT CCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE LAGKRSPHLDPVVSELRNDGFEVSFHKAKYRFQRGAEEMVVVRRIGLEQRRTCTSYPAIV ECCCCCCCCCHHHHHHHCCCCEEEHHHHHHHHHHCHHHHHHHHHHCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]