| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is yvbG [H]
Identifier: 189499141
GI number: 189499141
Start: 155665
End: 156312
Strand: Direct
Name: yvbG [H]
Synonym: Cphamn1_0155
Alternate gene names: 189499141
Gene position: 155665-156312 (Clockwise)
Preceding gene: 189499140
Following gene: 189499142
Centisome position: 5.69
GC content: 48.92
Gene sequence:
>648_bases ATGCATGAACTTCTGAGTCACACCCTGGTCATGGTAGGAGGCTATTTTGCCATCATGAATCCATTAGCCAATACGGCTAT CTTTACGGCTGTTACAGCGGGGATGGATGATCGCGGGATTAAAAAAACGGCACTGAGTGCAGTTGTTACCGCTTTGTGCA TTGTTCTCTGTTTTATTCTTCTTGGTCGGATCATTTTTGACTTTTTCGGTATAACCCTTCCTGCTTTGCGTGTTGCGGGT GGAATTATGGTTTTTTTTATCGGATTCGATATGATGCATGGCAGAACATCTGCTGCACACGCTCCGGCCGGCGGCGGGGC TTCGGGGACACCGGGCCAGAATCTCGGCATCAGTCCTTTGGGGATTCCGATTCTTGCCGGTCCGGGGACGATCGCGGTTT CCATGAGCTATTCCGCTACGGGCAATGGACTCGATATTGCTGTCAATGCGCTTGTTTTTTCCGTTATGTGCCTGATAACG TATGTTTTTTTCCTGCTCGGTGAGAAGGTTGAACAGAAACTCGGCCGGGAAGGACTAAAGGTCATTACCCAGATCATGGG CCTCATACTTTCCGTTATCGGGGTCCAGATAGGCATCGAGGGAATATTCGGTGCGATTTCTTTATTTCAGCAGCACCATG CTGTATAA
Upstream 100 bases:
>100_bases GGGGGACGTTCATGTCGTGCAGCCTGAGAGCATGCCCACCCGGACCGGCATTGCCGCTGTGTTCAGGTTTTGAAACAGTT TACCATAATTTGCCACCCTC
Downstream 100 bases:
>100_bases GCCGGTTTTTCAACTATCAGAATAAACTCGCCAATGATGTTCCCATTTCTGCAGCGCCTTCTGGTGTTTGCTTTCCTGGT ACTCCTGAGTTGTGGAGACA
Product: multiple antibiotic resistance (MarC)-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MHELLSHTLVMVGGYFAIMNPLANTAIFTAVTAGMDDRGIKKTALSAVVTALCIVLCFILLGRIIFDFFGITLPALRVAG GIMVFFIGFDMMHGRTSAAHAPAGGGASGTPGQNLGISPLGIPILAGPGTIAVSMSYSATGNGLDIAVNALVFSVMCLIT YVFFLLGEKVEQKLGREGLKVITQIMGLILSVIGVQIGIEGIFGAISLFQQHHAV
Sequences:
>Translated_215_residues MHELLSHTLVMVGGYFAIMNPLANTAIFTAVTAGMDDRGIKKTALSAVVTALCIVLCFILLGRIIFDFFGITLPALRVAG GIMVFFIGFDMMHGRTSAAHAPAGGGASGTPGQNLGISPLGIPILAGPGTIAVSMSYSATGNGLDIAVNALVFSVMCLIT YVFFLLGEKVEQKLGREGLKVITQIMGLILSVIGVQIGIEGIFGAISLFQQHHAV >Mature_215_residues MHELLSHTLVMVGGYFAIMNPLANTAIFTAVTAGMDDRGIKKTALSAVVTALCIVLCFILLGRIIFDFFGITLPALRVAG GIMVFFIGFDMMHGRTSAAHAPAGGGASGTPGQNLGISPLGIPILAGPGTIAVSMSYSATGNGLDIAVNALVFSVMCLIT YVFFLLGEKVEQKLGREGLKVITQIMGLILSVIGVQIGIEGIFGAISLFQQHHAV
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0056 (marC) family [H]
Homologues:
Organism=Escherichia coli, GI1787809, Length=202, Percent_Identity=29.7029702970297, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787494, Length=194, Percent_Identity=28.3505154639175, Blast_Score=87, Evalue=6e-19, Organism=Escherichia coli, GI1789842, Length=204, Percent_Identity=28.921568627451, Blast_Score=74, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002771 [H]
Pfam domain/function: PF01914 MarC [H]
EC number: NA
Molecular weight: Translated: 22381; Mature: 22381
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHELLSHTLVMVGGYFAIMNPLANTAIFTAVTAGMDDRGIKKTALSAVVTALCIVLCFIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGRIIFDFFGITLPALRVAGGIMVFFIGFDMMHGRTSAAHAPAGGGASGTPGQNLGISPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GIPILAGPGTIAVSMSYSATGNGLDIAVNALVFSVMCLITYVFFLLGEKVEQKLGREGLK CCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH VITQIMGLILSVIGVQIGIEGIFGAISLFQQHHAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHELLSHTLVMVGGYFAIMNPLANTAIFTAVTAGMDDRGIKKTALSAVVTALCIVLCFIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LGRIIFDFFGITLPALRVAGGIMVFFIGFDMMHGRTSAAHAPAGGGASGTPGQNLGISPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GIPILAGPGTIAVSMSYSATGNGLDIAVNALVFSVMCLITYVFFLLGEKVEQKLGREGLK CCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH VITQIMGLILSVIGVQIGIEGIFGAISLFQQHHAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]