| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
Click here to switch to the map view.
The map label for this gene is 189499140
Identifier: 189499140
GI number: 189499140
Start: 154492
End: 155637
Strand: Direct
Name: 189499140
Synonym: Cphamn1_0154
Alternate gene names: NA
Gene position: 154492-155637 (Clockwise)
Preceding gene: 189499131
Following gene: 189499141
Centisome position: 5.65
GC content: 50.52
Gene sequence:
>1146_bases ATGAACGCACGTGTTTCAGATTACCCCGCGGTTATTTTTTCTTCAGTCGAACCGCCATGTCTTTCCTTATATCAGAAGAC TCACCGTCATCATCCGGAAAATCAGCAGGACCCTATCCGTTTTCGTAATCTTGTGAAGAGACTTGAAGAGTCACTTTCAA AAACCTATGCGAAACGTGAGATTGAGTTACTGTTGAAGCCCTTTTACGATCTGGCTGATGATCACCGTTTCTGGAATCAT ACGCTCGATGGGCTCGCAGTCCTTGGTGCATCGAACATGTTCAAGACCTATAGGCTTCAGGAAGATGTCCGTGACATCGC AGTTGTTTCCGATACATTCTACACAAAGCCTCTTGTCAGGATTTTCAAATCTTCGGAACGTTACCAGTTGCTTGCCGTTT CCCGCAAGAGTGTCAGGCTGTTCGAGGGAACAAAGGTTTCTCTCGATGAAGTTGAACTGCATGAGTCCATACCGAAGACG CTCATTGACGCGCTTGGCGAGGATGTGACTCCGCCCCATCAAACGGTTGCTTCCTATGGCGGAACGAGGGGGCCGGCAAT GCATCACGGTCATGGGGGCAAAAAGCCCGAGGAGAAAATAGATGCCGAGAGATTTTTTCGGATCATCGACAAGGGTGTTC TGGCACATTACAGCAATCATGAGCATTTGCCGCTTGTCCTGGCGGCTCTTCCCGAAAATCAGGGGCTTTTCCGTCAGATC AGCCAAAATCCATGGCTTGTCGAAAAAGGACTCGACCTGAATCCGGATGCAATGCAGAGTAGTGATCTCAAGGCGAAAGC GAGAGACGTTTTCGAGGAATACAATCGTTTGCGGTTACAGGCCCTGATCGAGCTTTACGGTGACGCTTTCGCCAGCGGCC TTGGCTCGGGTGATCTCGAAGAGGTTGCTGTTGCCGCCGCTTCAGGCAGAATATCGATGCTGTTTATCGATAACGATTAT CATATGCCGGCCTGTCTGGACAGATCGACCGGAAAATTTGAGCCGGATGATCCAGATAACCCTGTCAGCGGTGACCTGCT CGATGATATAGGAGAGCTGGTACTGCAGAAAGGGGGGGACGTTCATGTCGTGCAGCCTGAGAGCATGCCCACCCGGACCG GCATTGCCGCTGTGTTCAGGTTTTGA
Upstream 100 bases:
>100_bases GTTTCACTGGTTATAGAAGAGCGATCCTGACGTTTCCGTCTTGAGGATCATCACTTCATTATCGTACATCTTCCGAGAAG TCATCGTTAAAGGAGGTTGC
Downstream 100 bases:
>100_bases AACAGTTTACCATAATTTGCCACCCTCATGCATGAACTTCTGAGTCACACCCTGGTCATGGTAGGAGGCTATTTTGCCAT CATGAATCCATTAGCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNARVSDYPAVIFSSVEPPCLSLYQKTHRHHPENQQDPIRFRNLVKRLEESLSKTYAKREIELLLKPFYDLADDHRFWNH TLDGLAVLGASNMFKTYRLQEDVRDIAVVSDTFYTKPLVRIFKSSERYQLLAVSRKSVRLFEGTKVSLDEVELHESIPKT LIDALGEDVTPPHQTVASYGGTRGPAMHHGHGGKKPEEKIDAERFFRIIDKGVLAHYSNHEHLPLVLAALPENQGLFRQI SQNPWLVEKGLDLNPDAMQSSDLKAKARDVFEEYNRLRLQALIELYGDAFASGLGSGDLEEVAVAAASGRISMLFIDNDY HMPACLDRSTGKFEPDDPDNPVSGDLLDDIGELVLQKGGDVHVVQPESMPTRTGIAAVFRF
Sequences:
>Translated_381_residues MNARVSDYPAVIFSSVEPPCLSLYQKTHRHHPENQQDPIRFRNLVKRLEESLSKTYAKREIELLLKPFYDLADDHRFWNH TLDGLAVLGASNMFKTYRLQEDVRDIAVVSDTFYTKPLVRIFKSSERYQLLAVSRKSVRLFEGTKVSLDEVELHESIPKT LIDALGEDVTPPHQTVASYGGTRGPAMHHGHGGKKPEEKIDAERFFRIIDKGVLAHYSNHEHLPLVLAALPENQGLFRQI SQNPWLVEKGLDLNPDAMQSSDLKAKARDVFEEYNRLRLQALIELYGDAFASGLGSGDLEEVAVAAASGRISMLFIDNDY HMPACLDRSTGKFEPDDPDNPVSGDLLDDIGELVLQKGGDVHVVQPESMPTRTGIAAVFRF >Mature_381_residues MNARVSDYPAVIFSSVEPPCLSLYQKTHRHHPENQQDPIRFRNLVKRLEESLSKTYAKREIELLLKPFYDLADDHRFWNH TLDGLAVLGASNMFKTYRLQEDVRDIAVVSDTFYTKPLVRIFKSSERYQLLAVSRKSVRLFEGTKVSLDEVELHESIPKT LIDALGEDVTPPHQTVASYGGTRGPAMHHGHGGKKPEEKIDAERFFRIIDKGVLAHYSNHEHLPLVLAALPENQGLFRQI SQNPWLVEKGLDLNPDAMQSSDLKAKARDVFEEYNRLRLQALIELYGDAFASGLGSGDLEEVAVAAASGRISMLFIDNDY HMPACLDRSTGKFEPDDPDNPVSGDLLDDIGELVLQKGGDVHVVQPESMPTRTGIAAVFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42847; Mature: 42847
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARVSDYPAVIFSSVEPPCLSLYQKTHRHHPENQQDPIRFRNLVKRLEESLSKTYAKRE CCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IELLLKPFYDLADDHRFWNHTLDGLAVLGASNMFKTYRLQEDVRDIAVVSDTFYTKPLVR HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKSSERYQLLAVSRKSVRLFEGTKVSLDEVELHESIPKTLIDALGEDVTPPHQTVASYG HHCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC GTRGPAMHHGHGGKKPEEKIDAERFFRIIDKGVLAHYSNHEHLPLVLAALPENQGLFRQI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH SQNPWLVEKGLDLNPDAMQSSDLKAKARDVFEEYNRLRLQALIELYGDAFASGLGSGDLE CCCCCEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EVAVAAASGRISMLFIDNDYHMPACLDRSTGKFEPDDPDNPVSGDLLDDIGELVLQKGGD HHHHHHCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC VHVVQPESMPTRTGIAAVFRF EEEECCCCCCCHHHHHHHHCC >Mature Secondary Structure MNARVSDYPAVIFSSVEPPCLSLYQKTHRHHPENQQDPIRFRNLVKRLEESLSKTYAKRE CCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IELLLKPFYDLADDHRFWNHTLDGLAVLGASNMFKTYRLQEDVRDIAVVSDTFYTKPLVR HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFKSSERYQLLAVSRKSVRLFEGTKVSLDEVELHESIPKTLIDALGEDVTPPHQTVASYG HHCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC GTRGPAMHHGHGGKKPEEKIDAERFFRIIDKGVLAHYSNHEHLPLVLAALPENQGLFRQI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHH SQNPWLVEKGLDLNPDAMQSSDLKAKARDVFEEYNRLRLQALIELYGDAFASGLGSGDLE CCCCCEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EVAVAAASGRISMLFIDNDYHMPACLDRSTGKFEPDDPDNPVSGDLLDDIGELVLQKGGD HHHHHHCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC VHVVQPESMPTRTGIAAVFRF EEEECCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA