Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
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Accession | NC_010831 |
Length | 2,736,403 |
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The map label for this gene is 189499134
Identifier: 189499134
GI number: 189499134
Start: 138836
End: 140233
Strand: Reverse
Name: 189499134
Synonym: Cphamn1_0146
Alternate gene names: NA
Gene position: 140233-138836 (Counterclockwise)
Preceding gene: 189499135
Following gene: 189499133
Centisome position: 5.12
GC content: 53.43
Gene sequence:
>1398_bases ATGGCAAAAGATAAGACGATTCAGGGTAAAAAAGAACAGCAGATTTGCGCCATTTTGCCGAGCGACGACCAGCTCACCGG CAGGGCCGGCTTGAGCGTCTTCGCACTGTACCTGCGCAACATAGGGCTGTTTCCGATTATTGACCGCCTGTTCGGTACAG TGCGGAAGAATGGCAAGGGCCTGGCGGTCACCGAGATGTTCGTGCAGATTTTGAGCTTCTTCATGGATGGTACGAGCCGC CATCTGAACTGGTTCGATCATCTTGCCGCTGATGATGCCTATGCCGGCCTGCTCGGTACCGGTCGATTGGCCTCGTCGCA TGCCGTCAAGCGTTTTATCGGGGCTATCTCCTTCTGTCGGATTTACCTGTTCCGGAGATTGCTGCAGGATGTGTTTCTCT GGCGCCTGAAGCACACCAGGCCGGAAGTGATCATGCTCGGCATTGATACGACGGTTCTGGACAATGACGATGCCGAGAAG CGCCATGGGGTGCAACCCACATACAAGAAGGTCAAAGGGTTCCAGCCCTTGCAGATGAACTGGGGCAGGTATGTGGTGGA CGCGGTGTTCCGTGGAGGAAAGAAACACTCGAACCACGGCAATACGGTCAATGAGATGCTGGTGCATATGGTAAGGAAAA TCCGGAACGCTTACAGGGAAGAGGTTCCGATCATTGTGCGCATGGACGCCGGGTTCTTCGACGACGAAGTATTCAAGACC TGTGAGCAACTGCAAATCGGTTATCTGTGCGGCGGCAAGCAGTACAGCAATGTTCTTGATGAGGTTGCCGATGCGGTCGA CTGGCAATCGTTCAAAAAAGTCGAAACTGACTCAAAAAGCTGGATGTACACCGAATTCATGAGCAGACAAAAGAAATGGA AGAAAGAGCGCCGGACGATCTTCAGTACGCTCTGGGAAGAGGACGGGCAGTATCTGCTGCAAGGCATATGTCGTGATTCC GTCATCATCACCAATATGGGCATGGGTGAAAAGATCGATGAGCAGCTCACCAAGGTCGGCCGTGGGGACTTGCTCGACGC CGGAAAGCTTCTTGGCCTCTACCACGAAAGGGGAACAGACGAACTAACCAACCGTGCATTGAAGACCTTCGGCCATGAGC AGCTACCGTTCAAGCGATTCACTGCAAACTCGGCCTGGTACTACCTGATGGTGCTTGGCAACAACCTCTTTGAAGCCTTC AAGGAAGACGTGACCGAAGCGGTCATTCCGGTGTCGGCTTATGCCGACACCTTCCGCCGCAGGTTCATCGATACAGCCGG AAAACTGGTGCGCCATGCCGGGAAGCTGGTCATGAAAGTCAACAAGGTTGACTATGTTCGCCTGAAGTTCGACCAGCTGT ATGAGAAATGCCGTGTCGGACTTCCGCGACTGGAATAA
Upstream 100 bases:
>100_bases ATAAAAAAAGCCCTCACCTATGGGTGTAAAGTGTTATATTAGCGTGAGTAACGACCAAGTCACCACGTAATAAAACACAA CCCAGCAGGTGGAGAGCTTT
Downstream 100 bases:
>100_bases AGCGGCTTGAAGTGCTGAAAAACGACAGAAAACGATGGGATTAGTGCGCCCAATCGACAGGAAGTCCAGTGGTAATGAAG TATATTCCCCCTATCACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MAKDKTIQGKKEQQICAILPSDDQLTGRAGLSVFALYLRNIGLFPIIDRLFGTVRKNGKGLAVTEMFVQILSFFMDGTSR HLNWFDHLAADDAYAGLLGTGRLASSHAVKRFIGAISFCRIYLFRRLLQDVFLWRLKHTRPEVIMLGIDTTVLDNDDAEK RHGVQPTYKKVKGFQPLQMNWGRYVVDAVFRGGKKHSNHGNTVNEMLVHMVRKIRNAYREEVPIIVRMDAGFFDDEVFKT CEQLQIGYLCGGKQYSNVLDEVADAVDWQSFKKVETDSKSWMYTEFMSRQKKWKKERRTIFSTLWEEDGQYLLQGICRDS VIITNMGMGEKIDEQLTKVGRGDLLDAGKLLGLYHERGTDELTNRALKTFGHEQLPFKRFTANSAWYYLMVLGNNLFEAF KEDVTEAVIPVSAYADTFRRRFIDTAGKLVRHAGKLVMKVNKVDYVRLKFDQLYEKCRVGLPRLE
Sequences:
>Translated_465_residues MAKDKTIQGKKEQQICAILPSDDQLTGRAGLSVFALYLRNIGLFPIIDRLFGTVRKNGKGLAVTEMFVQILSFFMDGTSR HLNWFDHLAADDAYAGLLGTGRLASSHAVKRFIGAISFCRIYLFRRLLQDVFLWRLKHTRPEVIMLGIDTTVLDNDDAEK RHGVQPTYKKVKGFQPLQMNWGRYVVDAVFRGGKKHSNHGNTVNEMLVHMVRKIRNAYREEVPIIVRMDAGFFDDEVFKT CEQLQIGYLCGGKQYSNVLDEVADAVDWQSFKKVETDSKSWMYTEFMSRQKKWKKERRTIFSTLWEEDGQYLLQGICRDS VIITNMGMGEKIDEQLTKVGRGDLLDAGKLLGLYHERGTDELTNRALKTFGHEQLPFKRFTANSAWYYLMVLGNNLFEAF KEDVTEAVIPVSAYADTFRRRFIDTAGKLVRHAGKLVMKVNKVDYVRLKFDQLYEKCRVGLPRLE >Mature_464_residues AKDKTIQGKKEQQICAILPSDDQLTGRAGLSVFALYLRNIGLFPIIDRLFGTVRKNGKGLAVTEMFVQILSFFMDGTSRH LNWFDHLAADDAYAGLLGTGRLASSHAVKRFIGAISFCRIYLFRRLLQDVFLWRLKHTRPEVIMLGIDTTVLDNDDAEKR HGVQPTYKKVKGFQPLQMNWGRYVVDAVFRGGKKHSNHGNTVNEMLVHMVRKIRNAYREEVPIIVRMDAGFFDDEVFKTC EQLQIGYLCGGKQYSNVLDEVADAVDWQSFKKVETDSKSWMYTEFMSRQKKWKKERRTIFSTLWEEDGQYLLQGICRDSV IITNMGMGEKIDEQLTKVGRGDLLDAGKLLGLYHERGTDELTNRALKTFGHEQLPFKRFTANSAWYYLMVLGNNLFEAFK EDVTEAVIPVSAYADTFRRRFIDTAGKLVRHAGKLVMKVNKVDYVRLKFDQLYEKCRVGLPRLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53527; Mature: 53395
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDKTIQGKKEQQICAILPSDDQLTGRAGLSVFALYLRNIGLFPIIDRLFGTVRKNGKG CCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC LAVTEMFVQILSFFMDGTSRHLNWFDHLAADDAYAGLLGTGRLASSHAVKRFIGAISFCR CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH IYLFRRLLQDVFLWRLKHTRPEVIMLGIDTTVLDNDDAEKRHGVQPTYKKVKGFQPLQMN HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCHHHHCCCCHHHHHHCCCCCHHHC WGRYVVDAVFRGGKKHSNHGNTVNEMLVHMVRKIRNAYREEVPIIVRMDAGFFDDEVFKT CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH CEQLQIGYLCGGKQYSNVLDEVADAVDWQSFKKVETDSKSWMYTEFMSRQKKWKKERRTI HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FSTLWEEDGQYLLQGICRDSVIITNMGMGEKIDEQLTKVGRGDLLDAGKLLGLYHERGTD HHHHHHHCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH ELTNRALKTFGHEQLPFKRFTANSAWYYLMVLGNNLFEAFKEDVTEAVIPVSAYADTFRR HHHHHHHHHCCCCCCCHHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFIDTAGKLVRHAGKLVMKVNKVDYVRLKFDQLYEKCRVGLPRLE HHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKDKTIQGKKEQQICAILPSDDQLTGRAGLSVFALYLRNIGLFPIIDRLFGTVRKNGKG CCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC LAVTEMFVQILSFFMDGTSRHLNWFDHLAADDAYAGLLGTGRLASSHAVKRFIGAISFCR CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH IYLFRRLLQDVFLWRLKHTRPEVIMLGIDTTVLDNDDAEKRHGVQPTYKKVKGFQPLQMN HHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCHHHHCCCCHHHHHHCCCCCHHHC WGRYVVDAVFRGGKKHSNHGNTVNEMLVHMVRKIRNAYREEVPIIVRMDAGFFDDEVFKT CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHH CEQLQIGYLCGGKQYSNVLDEVADAVDWQSFKKVETDSKSWMYTEFMSRQKKWKKERRTI HHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FSTLWEEDGQYLLQGICRDSVIITNMGMGEKIDEQLTKVGRGDLLDAGKLLGLYHERGTD HHHHHHHCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCH ELTNRALKTFGHEQLPFKRFTANSAWYYLMVLGNNLFEAFKEDVTEAVIPVSAYADTFRR HHHHHHHHHCCCCCCCHHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFIDTAGKLVRHAGKLVMKVNKVDYVRLKFDQLYEKCRVGLPRLE HHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA