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The map label for this gene is yfcH [C]

Identifier: 189499097

GI number: 189499097

Start: 98083

End: 99021

Strand: Direct

Name: yfcH [C]

Synonym: Cphamn1_0103

Alternate gene names: 189499097

Gene position: 98083-99021 (Clockwise)

Preceding gene: 189499096

Following gene: 189499098

Centisome position: 3.58

GC content: 49.73

Gene sequence:

>939_bases
ATGGAAGATCATATCGTTATTACCGGTGCTACAGGTGTGATTGGCTCTGAACTTGCGCATCAGCTGATCGCCGAAGGTGA
GCAAGTGGTTGTTTTTTCGCGTTCTCCTAATAGTGCTTCGTCCAAGGTTCCCGGTGCGGCGGCATATGCCGCCTGGAATT
ATGACAATAGCGATGGAGAATGGACCCGGTATATCAGCGGAGCAAAAGCGGTGATACATCTGGCGGGAAAACCTCTTCTC
GATACGCGCTGGACAGAGGAGCATAAGGTTGAGTGCTATAATTCGAGAGTCGTGGGAACGAAAAATCTTGTCAAGGCTAT
CCAGGGGGCCGACATAAAACCGAAATCCCTGATTTCCGCATCTGCCATAGGATATTACGGTTCTTACGAAAACTGTGGTG
ACTCGCCTGACCTTGATGAAGCCGCGGCGGAAGGTGAAGATTTTCTGGCTAAGATCTGTATCGATTGGGAGAAGGAGGCT
GAGAATGTGCCGGAAGGTGTGCGGCTTGTGCTGTTAAGAACGGGTATTGTGCTTTCAACCAAAGGAGGAATGCTTCAGCA
GATGCTTCTGCCTTTTAACCTTTTCCTTGGCGGGCCTGTCGGTTCAGGTAAACAGTGTATTTCCTGGATTCACGTAGATG
ATGAAGTCGCGATTATCCGCAAGGCTGTAGAGGAGTCTTCTTATAAGGGGCCGATAAATCTTGTTGCTCCGCATCCGGTT
TCCATGAAAGAGTTCGCGGGAGATCTTGGATCTGTGCTTTCAAGACCGTCTCTGATTCCTGTCCCGAAGTTTGCCTTGCA
GATTCTGATGGGGGAAGGGGCTGAATACGCAAGTAAAGGGGGCAAGGTCGTTCCGGGGTTTTTGAAGGAGCAGAACTATC
GCTTTACGCATCCGTCTCTTCGTGAAGCGCTGGCTGATCTTGTTGAACATAACAAGTAG

Upstream 100 bases:

>100_bases
AAAATCGGGAATTTTTATCCTGACAAGTGGGTTTTTGAATAAATACAGCAATAAAAAGATGTTAAGGAATATTTTCACCC
TACAAACCACAGGTTGAATC

Downstream 100 bases:

>100_bases
GCGGGAGGGAGAGGAATTCCCCGCTGTCTGTCGGGTGTACTAGGGTTACTTACCAACAATAAAAGGAGAAAGAATGGGAA
CCAGAGGTCGTGAAATTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MEDHIVITGATGVIGSELAHQLIAEGEQVVVFSRSPNSASSKVPGAAAYAAWNYDNSDGEWTRYISGAKAVIHLAGKPLL
DTRWTEEHKVECYNSRVVGTKNLVKAIQGADIKPKSLISASAIGYYGSYENCGDSPDLDEAAAEGEDFLAKICIDWEKEA
ENVPEGVRLVLLRTGIVLSTKGGMLQQMLLPFNLFLGGPVGSGKQCISWIHVDDEVAIIRKAVEESSYKGPINLVAPHPV
SMKEFAGDLGSVLSRPSLIPVPKFALQILMGEGAEYASKGGKVVPGFLKEQNYRFTHPSLREALADLVEHNK

Sequences:

>Translated_312_residues
MEDHIVITGATGVIGSELAHQLIAEGEQVVVFSRSPNSASSKVPGAAAYAAWNYDNSDGEWTRYISGAKAVIHLAGKPLL
DTRWTEEHKVECYNSRVVGTKNLVKAIQGADIKPKSLISASAIGYYGSYENCGDSPDLDEAAAEGEDFLAKICIDWEKEA
ENVPEGVRLVLLRTGIVLSTKGGMLQQMLLPFNLFLGGPVGSGKQCISWIHVDDEVAIIRKAVEESSYKGPINLVAPHPV
SMKEFAGDLGSVLSRPSLIPVPKFALQILMGEGAEYASKGGKVVPGFLKEQNYRFTHPSLREALADLVEHNK
>Mature_312_residues
MEDHIVITGATGVIGSELAHQLIAEGEQVVVFSRSPNSASSKVPGAAAYAAWNYDNSDGEWTRYISGAKAVIHLAGKPLL
DTRWTEEHKVECYNSRVVGTKNLVKAIQGADIKPKSLISASAIGYYGSYENCGDSPDLDEAAAEGEDFLAKICIDWEKEA
ENVPEGVRLVLLRTGIVLSTKGGMLQQMLLPFNLFLGGPVGSGKQCISWIHVDDEVAIIRKAVEESSYKGPINLVAPHPV
SMKEFAGDLGSVLSRPSLIPVPKFALQILMGEGAEYASKGGKVVPGFLKEQNYRFTHPSLREALADLVEHNK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=309, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=3e-39,
Organism=Escherichia coli, GI1788642, Length=307, Percent_Identity=40.7166123778502, Blast_Score=210, Evalue=1e-55,
Organism=Drosophila melanogaster, GI28573846, Length=313, Percent_Identity=32.2683706070287, Blast_Score=155, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33663; Mature: 33663

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDHIVITGATGVIGSELAHQLIAEGEQVVVFSRSPNSASSKVPGAAAYAAWNYDNSDGE
CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
WTRYISGAKAVIHLAGKPLLDTRWTEEHKVECYNSRVVGTKNLVKAIQGADIKPKSLISA
CHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEECCEECCHHHHHHHHHCCCCCHHHHHHH
SAIGYYGSYENCGDSPDLDEAAAEGEDFLAKICIDWEKEAENVPEGVRLVLLRTGIVLST
HHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHCCCCHHHEEEEEECCEEEEC
KGGMLQQMLLPFNLFLGGPVGSGKQCISWIHVDDEVAIIRKAVEESSYKGPINLVAPHPV
CCHHHHHHHHHHHHEECCCCCCCHHHEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCC
SMKEFAGDLGSVLSRPSLIPVPKFALQILMGEGAEYASKGGKVVPGFLKEQNYRFTHPSL
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCCCCHHH
REALADLVEHNK
HHHHHHHHHCCC
>Mature Secondary Structure
MEDHIVITGATGVIGSELAHQLIAEGEQVVVFSRSPNSASSKVPGAAAYAAWNYDNSDGE
CCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCC
WTRYISGAKAVIHLAGKPLLDTRWTEEHKVECYNSRVVGTKNLVKAIQGADIKPKSLISA
CHHHHHCCCEEEEECCCCCCCCCCCCCHHHEEECCEECCHHHHHHHHHCCCCCHHHHHHH
SAIGYYGSYENCGDSPDLDEAAAEGEDFLAKICIDWEKEAENVPEGVRLVLLRTGIVLST
HHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHCCCCHHHEEEEEECCEEEEC
KGGMLQQMLLPFNLFLGGPVGSGKQCISWIHVDDEVAIIRKAVEESSYKGPINLVAPHPV
CCHHHHHHHHHHHHEECCCCCCCHHHEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCC
SMKEFAGDLGSVLSRPSLIPVPKFALQILMGEGAEYASKGGKVVPGFLKEQNYRFTHPSL
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHCCCCCCCHHHCCCCCCCCCHHH
REALADLVEHNK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]