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The map label for this gene is rng [H]

Identifier: 189499019

GI number: 189499019

Start: 22353

End: 24065

Strand: Direct

Name: rng [H]

Synonym: Cphamn1_0019

Alternate gene names: 189499019

Gene position: 22353-24065 (Clockwise)

Preceding gene: 189499014

Following gene: 189499020

Centisome position: 0.82

GC content: 51.02

Gene sequence:

>1713_bases
ATGAAGAAGACTGTGAAAAAGCAGTTGCTGATGAACAAGTCCGGCGACGAGATTCAGGTGGCTCTGGTAGAAGAGGGTCG
TCTGGCGGAGCTCGTGATCGAACGTCCGGACAGTCTCCGCAGCATAGGTGATATATATCTCGGAAGGGTGCACAAGGTGG
TTGAAGGGCTCAAGGCGGCGTTTGTCGATATAGGACAGAAGTCGGACGGATTTTTGCATTTTTCCGATGTCGGAACCACA
ACCGAGGATTATCGAGCGCTTATTGAAGATGATGATGATGACGACGAGAACGGCAATGGCGATACCGATGAAGAAGGGAA
AGCGGGGATGAAAACGCAGCAGGAGCAGAAGGAGGATACCCGGAGGCCTTCGCCTGCTGGAAACGGTCAGAAAAACGGAG
GAAGCAGAAGCAAGGGCAACGGCGCAAGCGCCGGAAAAGACGGGGACGGTAGACAGTCATACACCCAGATGATTGCCGGG
AAGTTAAAGACCAATGACTCTATTCTCGTTCAGGTGATCAAAGAACCTATCAGCAACAAGGGCTCTCGGTTGACTTCCGA
TATCACCATAGCAGGACGTTTTATGGTGTTGCTTCCCTTCGGAGGCGGCCAGATTGCGGTTTCCCGTCGAGTTGTCTCAC
GCAAGGAGCGCGCAAGGCTTAAAAAACTTGTTCGATCGATGCTGCCGGATGGTTTTGGCGCGATCATCAGGACTGTTGCG
GAACTTCAGGAGGAGGAACTGCTGAAAAAGGATCTTGAGAAGCTGCTTGTCAAGTGGGAGCAGATTGAGGAAAAACTGAA
GGACGCCAAACCTCCACAGCTCATTTTCAAGGAGGATACCATTATTTCAAGTGTGCTGCGCGATTCCCTGACGACTGATG
TTACGGAACTGGTGGCTAACTCGCAGAGTATTCACAAGGAGACCCTGAACTATATTCAGTGGGCGGCTCCCGAGATGGAA
AAGAACGTGTTTTTCTATCAGGGCAAGCTTCCGCTTTTTGAAGGTTACGGAATCGCAAAGGATGTTGAATCCATCTTTTC
CAGAAAGGTGTGGCTCAAGTCCGGCGGATATATCATTATAGAGCATACCGAGGCCATGGTTGTGGTCGATGTGAACAGCG
GGCGCTATGCGGCAAAGAAGGAGCAGGAGGAGAACTCTCTGAAAACCAACCTTGAAGCTTCGCGTGAGGTAGTACGTCAG
CTCAGGCTGAGGGATATCGGAGGGATAATCGTGGTTGACTTTATCGATATGCTCGATCCGAAAAATTCAAAGAAGGTCTA
TGACTCAATGAAGAACGAATTGCGTCAGGACAGGGCGAAGTCAAACATTCTGCCGATGTCGGATTTCGGGTTGATGCAGA
TCACCAGGGAAAGGATTCGCCCCAGCCTCATGCAGCGCATGGGTGATCAGTGTCCGGCTTGCGGCGGGTCAGGGATCGTG
CAGGCGCGTTGTACGACCATCAACCAGATTGAGCGTTGGCTCAGGAAATATGCTCTCCAGAAGAAAATGGTGTTTCAGCA
GCTTGACCTGTATGTTAGCCCGACTGTCGCAGAGCCTTTGCGGGATACAGACAGGAATATTGAGATGAAATGGTTTCTCC
AGCATCTGCTTTTTGTCAGGGTGAAACAGGACGAGAGCCTGAGGAGCGATGACTTCAGGTTCTATGCCCGGAAAAACAGC
GCGGATCTGACTGCAGAGTACGGTGATCTCTGA

Upstream 100 bases:

>100_bases
ATTTGTCCTTTTGACAAAAATGTTAAATAATACAGGTTACATTTCATAACAAAGGATGACGTGAAACAGGTGATAACATT
TTAGAATTTGAGGTTTTGTA

Downstream 100 bases:

>100_bases
GTGAGGAATACCGGAAGCACGAGTATGTGAAACGTAGATAACAGAGCCTGAAAGAGCGATGAGAAGGGGGCAGAAGCGTA
TATCGCGTTGATCCGTGAAT

Product: ribonuclease, Rne/Rng family

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MKKTVKKQLLMNKSGDEIQVALVEEGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAAFVDIGQKSDGFLHFSDVGTT
TEDYRALIEDDDDDDENGNGDTDEEGKAGMKTQQEQKEDTRRPSPAGNGQKNGGSRSKGNGASAGKDGDGRQSYTQMIAG
KLKTNDSILVQVIKEPISNKGSRLTSDITIAGRFMVLLPFGGGQIAVSRRVVSRKERARLKKLVRSMLPDGFGAIIRTVA
ELQEEELLKKDLEKLLVKWEQIEEKLKDAKPPQLIFKEDTIISSVLRDSLTTDVTELVANSQSIHKETLNYIQWAAPEME
KNVFFYQGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVVDVNSGRYAAKKEQEENSLKTNLEASREVVRQ
LRLRDIGGIIVVDFIDMLDPKNSKKVYDSMKNELRQDRAKSNILPMSDFGLMQITRERIRPSLMQRMGDQCPACGGSGIV
QARCTTINQIERWLRKYALQKKMVFQQLDLYVSPTVAEPLRDTDRNIEMKWFLQHLLFVRVKQDESLRSDDFRFYARKNS
ADLTAEYGDL

Sequences:

>Translated_570_residues
MKKTVKKQLLMNKSGDEIQVALVEEGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAAFVDIGQKSDGFLHFSDVGTT
TEDYRALIEDDDDDDENGNGDTDEEGKAGMKTQQEQKEDTRRPSPAGNGQKNGGSRSKGNGASAGKDGDGRQSYTQMIAG
KLKTNDSILVQVIKEPISNKGSRLTSDITIAGRFMVLLPFGGGQIAVSRRVVSRKERARLKKLVRSMLPDGFGAIIRTVA
ELQEEELLKKDLEKLLVKWEQIEEKLKDAKPPQLIFKEDTIISSVLRDSLTTDVTELVANSQSIHKETLNYIQWAAPEME
KNVFFYQGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVVDVNSGRYAAKKEQEENSLKTNLEASREVVRQ
LRLRDIGGIIVVDFIDMLDPKNSKKVYDSMKNELRQDRAKSNILPMSDFGLMQITRERIRPSLMQRMGDQCPACGGSGIV
QARCTTINQIERWLRKYALQKKMVFQQLDLYVSPTVAEPLRDTDRNIEMKWFLQHLLFVRVKQDESLRSDDFRFYARKNS
ADLTAEYGDL
>Mature_570_residues
MKKTVKKQLLMNKSGDEIQVALVEEGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAAFVDIGQKSDGFLHFSDVGTT
TEDYRALIEDDDDDDENGNGDTDEEGKAGMKTQQEQKEDTRRPSPAGNGQKNGGSRSKGNGASAGKDGDGRQSYTQMIAG
KLKTNDSILVQVIKEPISNKGSRLTSDITIAGRFMVLLPFGGGQIAVSRRVVSRKERARLKKLVRSMLPDGFGAIIRTVA
ELQEEELLKKDLEKLLVKWEQIEEKLKDAKPPQLIFKEDTIISSVLRDSLTTDVTELVANSQSIHKETLNYIQWAAPEME
KNVFFYQGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIIIEHTEAMVVVDVNSGRYAAKKEQEENSLKTNLEASREVVRQ
LRLRDIGGIIVVDFIDMLDPKNSKKVYDSMKNELRQDRAKSNILPMSDFGLMQITRERIRPSLMQRMGDQCPACGGSGIV
QARCTTINQIERWLRKYALQKKMVFQQLDLYVSPTVAEPLRDTDRNIEMKWFLQHLLFVRVKQDESLRSDDFRFYARKNS
ADLTAEYGDL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=514, Percent_Identity=32.1011673151751, Blast_Score=247, Evalue=2e-66,
Organism=Escherichia coli, GI1787325, Length=342, Percent_Identity=36.5497076023392, Blast_Score=226, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 64382; Mature: 64382

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTVKKQLLMNKSGDEIQVALVEEGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAA
CCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FVDIGQKSDGFLHFSDVGTTTEDYRALIEDDDDDDENGNGDTDEEGKAGMKTQQEQKEDT
HHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
RRPSPAGNGQKNGGSRSKGNGASAGKDGDGRQSYTQMIAGKLKTNDSILVQVIKEPISNK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
GSRLTSDITIAGRFMVLLPFGGGQIAVSRRVVSRKERARLKKLVRSMLPDGFGAIIRTVA
CCEEECCEEEECEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ELQEEELLKKDLEKLLVKWEQIEEKLKDAKPPQLIFKEDTIISSVLRDSLTTDVTELVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHC
SQSIHKETLNYIQWAAPEMEKNVFFYQGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIII
CHHHHHHHHHHHHHCCCCHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEE
EHTEAMVVVDVNSGRYAAKKEQEENSLKTNLEASREVVRQLRLRDIGGIIVVDFIDMLDP
EECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCC
KNSKKVYDSMKNELRQDRAKSNILPMSDFGLMQITRERIRPSLMQRMGDQCPACGGSGIV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
QARCTTINQIERWLRKYALQKKMVFQQLDLYVSPTVAEPLRDTDRNIEMKWFLQHLLFVR
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
VKQDESLRSDDFRFYARKNSADLTAEYGDL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKKTVKKQLLMNKSGDEIQVALVEEGRLAELVIERPDSLRSIGDIYLGRVHKVVEGLKAA
CCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FVDIGQKSDGFLHFSDVGTTTEDYRALIEDDDDDDENGNGDTDEEGKAGMKTQQEQKEDT
HHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
RRPSPAGNGQKNGGSRSKGNGASAGKDGDGRQSYTQMIAGKLKTNDSILVQVIKEPISNK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
GSRLTSDITIAGRFMVLLPFGGGQIAVSRRVVSRKERARLKKLVRSMLPDGFGAIIRTVA
CCEEECCEEEECEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ELQEEELLKKDLEKLLVKWEQIEEKLKDAKPPQLIFKEDTIISSVLRDSLTTDVTELVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHC
SQSIHKETLNYIQWAAPEMEKNVFFYQGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIII
CHHHHHHHHHHHHHCCCCHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHEEECCCEEEE
EHTEAMVVVDVNSGRYAAKKEQEENSLKTNLEASREVVRQLRLRDIGGIIVVDFIDMLDP
EECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCC
KNSKKVYDSMKNELRQDRAKSNILPMSDFGLMQITRERIRPSLMQRMGDQCPACGGSGIV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE
QARCTTINQIERWLRKYALQKKMVFQQLDLYVSPTVAEPLRDTDRNIEMKWFLQHLLFVR
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
VKQDESLRSDDFRFYARKNSADLTAEYGDL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]