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The map label for this gene is xylR [C]

Identifier: 189352359

GI number: 189352359

Start: 414173

End: 415234

Strand: Direct

Name: xylR [C]

Synonym: BMULJ_03578

Alternate gene names: 189352359

Gene position: 414173-415234 (Clockwise)

Preceding gene: 189352357

Following gene: 189352360

Centisome position: 16.75

GC content: 67.98

Gene sequence:

>1062_bases
TTGGCGCAGGCCGCGCGGCTCGGCGAGGCGTTCAATCTGGCCAATCGCCTGCAAGCGTTCGGTGCGGATTATCAGCCGAA
GTACGTGTCGGAAAGCGGCGGGCTCGTGACGTCGTCGTCGGGTGTGCGGATCGCCGTCGATCCGCTTGGCGACGAGCACG
CGCGTCGGGCAATCGCGTTCTTCCATCTGCACGGCGAGCGCGCGAGCGTGCGTCGCGATGAGGCATTGCACCGGCGCCTG
AGCGAGATCCGCCGGCACGCACGATGGATCGTCGATGCGATGGACCTGCCCGCGCTCGCCGCGCCGTCCGTGCCGACGCG
GCGCAATGGATCGGCTTCGCAGGCGCCGGAGGCGCGGCATGCGGTATCGCGTGCGGCCGAGCTGCAGCAAGCGGACACCG
CCGTGTTCACGGCCGTGCTCGACATGTTTCGCGCCGACCTCGGCGACAGCGTGGCCGAGGAAATCGCGTCGAACCTGCTG
CGCCCCGTCGAGCAGCGCTATGTGCAATCGATGTGGGCGTTTCGCGAACTGAGCGCGAGCCCGCCGATCCGGATGTCGGC
GCAGCGGCTGCGCGTGCAGAGCGTCGAGCGCGTGTCGATTGCGCAGATCGCGCGCACGGCCGCGATGAGCGAGCGCAATT
TCCTGCGGCGCTTCAAGAAGGAGATCGGCGTGACGCCGACCGAATTCCTGCAGCACGTGCGCCTCGAGCGCGCGTGTCAC
ATGCTCGTTCATACGATGCTGCCGGCCGACAAGGTCGCGCGCCGCACGGGATTCGGCAGCGGCGAGCGTCTCGCGAAGCT
GTTTCGTCAGCGCATGCTGATGTCGCCGACGGAATTTCGCGTCGCCGAACGCGAGCGGATGCTCGCGAACGGCGCGGCCT
TGCCGGCGCCCGAGATCGCGCGCGTGGACGGCGTACCGCCGTCGCATCGCATCGTGCGCGACGACGCGCACGAAAAAACG
GGCCGGATATCCGTAAAATCGCCGTATCGCGATTTCGAGCCCCGGTTTCCATGCGCTTCCTCCCCACCACCGCTACTGCG
CCGTTCTGCCCGTCGGAAGTAA

Upstream 100 bases:

>100_bases
GATTACAAGAAGTCGGAACGAGTCGGGGGCTTGGCACGTGGACGCAGCAGACGCAGCAGATCAGCGGTGGGTCGTTATCT
ATTTGAGCGCGGGATTTTCG

Downstream 100 bases:

>100_bases
AGGGCAGCATCACGATCGAGGCCGGCGCGTCGCGCTGGCTGAAGCTCAAGCGTTTCTTCGGACCGGGCCTGCTCGTCGCG
ATCGGCTACATGGATCCCGG

Product: putative AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; AraC Family Regulatory Protein; AraC Family Transcription Regulator Protein; Transcriptional Regulator Arac Family; Transcriptional Activator FtrA; ThiJ/PfpI Domain-Containing Protein; DJ-1/PfpI Family; ADPA-Family Transcriptional Regulator; ADPA Family Transcriptional Regulator; AraC Family Transcriptional Regulatory Protein; AraC-Family Protein Transcriptional Regulator; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MAQAARLGEAFNLANRLQAFGADYQPKYVSESGGLVTSSSGVRIAVDPLGDEHARRAIAFFHLHGERASVRRDEALHRRL
SEIRRHARWIVDAMDLPALAAPSVPTRRNGSASQAPEARHAVSRAAELQQADTAVFTAVLDMFRADLGDSVAEEIASNLL
RPVEQRYVQSMWAFRELSASPPIRMSAQRLRVQSVERVSIAQIARTAAMSERNFLRRFKKEIGVTPTEFLQHVRLERACH
MLVHTMLPADKVARRTGFGSGERLAKLFRQRMLMSPTEFRVAERERMLANGAALPAPEIARVDGVPPSHRIVRDDAHEKT
GRISVKSPYRDFEPRFPCASSPPPLLRRSARRK

Sequences:

>Translated_353_residues
MAQAARLGEAFNLANRLQAFGADYQPKYVSESGGLVTSSSGVRIAVDPLGDEHARRAIAFFHLHGERASVRRDEALHRRL
SEIRRHARWIVDAMDLPALAAPSVPTRRNGSASQAPEARHAVSRAAELQQADTAVFTAVLDMFRADLGDSVAEEIASNLL
RPVEQRYVQSMWAFRELSASPPIRMSAQRLRVQSVERVSIAQIARTAAMSERNFLRRFKKEIGVTPTEFLQHVRLERACH
MLVHTMLPADKVARRTGFGSGERLAKLFRQRMLMSPTEFRVAERERMLANGAALPAPEIARVDGVPPSHRIVRDDAHEKT
GRISVKSPYRDFEPRFPCASSPPPLLRRSARRK
>Mature_352_residues
AQAARLGEAFNLANRLQAFGADYQPKYVSESGGLVTSSSGVRIAVDPLGDEHARRAIAFFHLHGERASVRRDEALHRRLS
EIRRHARWIVDAMDLPALAAPSVPTRRNGSASQAPEARHAVSRAAELQQADTAVFTAVLDMFRADLGDSVAEEIASNLLR
PVEQRYVQSMWAFRELSASPPIRMSAQRLRVQSVERVSIAQIARTAAMSERNFLRRFKKEIGVTPTEFLQHVRLERACHM
LVHTMLPADKVARRTGFGSGERLAKLFRQRMLMSPTEFRVAERERMLANGAALPAPEIARVDGVPPSHRIVRDDAHEKTG
RISVKSPYRDFEPRFPCASSPPPLLRRSARRK

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39535; Mature: 39404

Theoretical pI: Translated: 11.50; Mature: 11.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAARLGEAFNLANRLQAFGADYQPKYVSESGGLVTSSSGVRIAVDPLGDEHARRAIAF
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHH
FHLHGERASVRRDEALHRRLSEIRRHARWIVDAMDLPALAAPSVPTRRNGSASQAPEARH
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
AVSRAAELQQADTAVFTAVLDMFRADLGDSVAEEIASNLLRPVEQRYVQSMWAFRELSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPIRMSAQRLRVQSVERVSIAQIARTAAMSERNFLRRFKKEIGVTPTEFLQHVRLERACH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MLVHTMLPADKVARRTGFGSGERLAKLFRQRMLMSPTEFRVAERERMLANGAALPAPEIA
HHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
RVDGVPPSHRIVRDDAHEKTGRISVKSPYRDFEPRFPCASSPPPLLRRSARRK
HCCCCCCCCHHHCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
AQAARLGEAFNLANRLQAFGADYQPKYVSESGGLVTSSSGVRIAVDPLGDEHARRAIAF
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHH
FHLHGERASVRRDEALHRRLSEIRRHARWIVDAMDLPALAAPSVPTRRNGSASQAPEARH
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHH
AVSRAAELQQADTAVFTAVLDMFRADLGDSVAEEIASNLLRPVEQRYVQSMWAFRELSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PPIRMSAQRLRVQSVERVSIAQIARTAAMSERNFLRRFKKEIGVTPTEFLQHVRLERACH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
MLVHTMLPADKVARRTGFGSGERLAKLFRQRMLMSPTEFRVAERERMLANGAALPAPEIA
HHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
RVDGVPPSHRIVRDDAHEKTGRISVKSPYRDFEPRFPCASSPPPLLRRSARRK
HCCCCCCCCHHHCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA