Click here to switch to the map view.

The map label for this gene is 189352228

Identifier: 189352228

GI number: 189352228

Start: 268156

End: 269274

Strand: Direct

Name: 189352228

Synonym: BMULJ_03446

Alternate gene names: NA

Gene position: 268156-269274 (Clockwise)

Preceding gene: 189352225

Following gene: 189352231

Centisome position: 10.84

GC content: 69.08

Gene sequence:

>1119_bases
ATGACTGATTCGAACGGGCGCGCCGGCAGGCTCGCCGTACCGCTGGCGGCACTCCTTGCCTGCGCGGCGCTGCCGGCGGC
TGCGCAATCGAGCGTGACGCTGTACGGGCGTATCGACACCGCGATCGAATATGCGAACGCGGGGCCGAACCATGTGACGC
GGATGGGCAGCGGCAATCTGTGGGCGTCGCAGTGGGGATTGAAGGGCGTCGAGGATCTCGGCGGCGGCTACGCCACGATC
TTCAAGCTCGAAGACGGCTTCAACGCCGCCAGCGGCGCGCTGTCGAACCCGAGCGCGCTGTTCGGTCGCGAAGCGTGGGT
CGGCATCACGGGCCCGTTCGGCGGCGTGCAGTTCGGCGAGCTCTACACGATCCTGCACACGACGCTCGTCACGTACAGCC
TGCCCGGCCTCGGTGCTGGGCTCGCATGGGGCAACGCGACGAACAACTTCGTCGGCCCGGCGTTTCTGCGCGTGCGCAAC
TCGCTGCGCTATACATCGCCGCGCTACGCGGGCTTCATGCTGCGCGCGATGGCCGCACGCGGCGCGAACGGCGCGGCCGG
GCAGCCGTCGACGCTCGGCGATACCTATGGCGCGGGCATCAACTACGTACGCGGCGGCCTGTCGATCGACGTCGACTACA
TGCAGCAGACATTCAGTCCGGTCGCCGCGTCGACGCTCGGCGCGACGAGTCGCGCCGCGAACGGCAACTACACGCTCGGC
GCGATTTCGTACGACTTCCGCGTCGTGAAGATCGCCGCGCTCTATCTGCGGCATCGCGGCGGGCCGGACGTCGCGGCCGC
GATCGATGCGCAGAGCGCGTATCCGCACAGCGACATCGTCGAACTCAGTGCGACGGTGCCGATCGGGCGCGCGTCGCTGC
TGCTGAGCGCGGGCCATTACCGGAAGGTCGCGGACAGCGACGGCAATGCCGACTCGTACGGCATCCGCTTCGACTATCCG
CTGTCGAAACGCACGGTGCTGTACACGGGCGCGGCGATGGTGCGCAACGGCGCGCATGCGCGCTTCGTCGTGAACGGCGC
GGCAGGCGGCGGCGTCGCGGTCGCAGCAGCGGGCGCGACCGCAAGCTCGCTCGTCGCGGGCATCGTCACGTCGTTCTGA

Upstream 100 bases:

>100_bases
GGCCGGTTTTGACCGATGCCGTTCGCCAGCGACTGCGAACGCGTTTCACACGATGCGTCGCATGGCATGCGTGCGCCGCA
CTTTCTACGGGACGACGAAG

Downstream 100 bases:

>100_bases
ACGCACGGCTGCGCGTACCGGCGCGCGGGGCTGCGCGCTTACGCGCACGCGGGCGGCTGCGGCGCGAGCCATGCCTCGAA
CGGCGCGAGCGTGCCGATGC

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MTDSNGRAGRLAVPLAALLACAALPAAAQSSVTLYGRIDTAIEYANAGPNHVTRMGSGNLWASQWGLKGVEDLGGGYATI
FKLEDGFNAASGALSNPSALFGREAWVGITGPFGGVQFGELYTILHTTLVTYSLPGLGAGLAWGNATNNFVGPAFLRVRN
SLRYTSPRYAGFMLRAMAARGANGAAGQPSTLGDTYGAGINYVRGGLSIDVDYMQQTFSPVAASTLGATSRAANGNYTLG
AISYDFRVVKIAALYLRHRGGPDVAAAIDAQSAYPHSDIVELSATVPIGRASLLLSAGHYRKVADSDGNADSYGIRFDYP
LSKRTVLYTGAAMVRNGAHARFVVNGAAGGGVAVAAAGATASSLVAGIVTSF

Sequences:

>Translated_372_residues
MTDSNGRAGRLAVPLAALLACAALPAAAQSSVTLYGRIDTAIEYANAGPNHVTRMGSGNLWASQWGLKGVEDLGGGYATI
FKLEDGFNAASGALSNPSALFGREAWVGITGPFGGVQFGELYTILHTTLVTYSLPGLGAGLAWGNATNNFVGPAFLRVRN
SLRYTSPRYAGFMLRAMAARGANGAAGQPSTLGDTYGAGINYVRGGLSIDVDYMQQTFSPVAASTLGATSRAANGNYTLG
AISYDFRVVKIAALYLRHRGGPDVAAAIDAQSAYPHSDIVELSATVPIGRASLLLSAGHYRKVADSDGNADSYGIRFDYP
LSKRTVLYTGAAMVRNGAHARFVVNGAAGGGVAVAAAGATASSLVAGIVTSF
>Mature_371_residues
TDSNGRAGRLAVPLAALLACAALPAAAQSSVTLYGRIDTAIEYANAGPNHVTRMGSGNLWASQWGLKGVEDLGGGYATIF
KLEDGFNAASGALSNPSALFGREAWVGITGPFGGVQFGELYTILHTTLVTYSLPGLGAGLAWGNATNNFVGPAFLRVRNS
LRYTSPRYAGFMLRAMAARGANGAAGQPSTLGDTYGAGINYVRGGLSIDVDYMQQTFSPVAASTLGATSRAANGNYTLGA
ISYDFRVVKIAALYLRHRGGPDVAAAIDAQSAYPHSDIVELSATVPIGRASLLLSAGHYRKVADSDGNADSYGIRFDYPL
SKRTVLYTGAAMVRNGAHARFVVNGAAGGGVAVAAAGATASSLVAGIVTSF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38204; Mature: 38073

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSNGRAGRLAVPLAALLACAALPAAAQSSVTLYGRIDTAIEYANAGPNHVTRMGSGNL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHEECCCCCCCEEECCCCCE
WASQWGLKGVEDLGGGYATIFKLEDGFNAASGALSNPSALFGREAWVGITGPFGGVQFGE
EHHHCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCHHH
LYTILHTTLVTYSLPGLGAGLAWGNATNNFVGPAFLRVRNSLRYTSPRYAGFMLRAMAAR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GANGAAGQPSTLGDTYGAGINYVRGGLSIDVDYMQQTFSPVAASTLGATSRAANGNYTLG
CCCCCCCCCCCCCCHHCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
AISYDFRVVKIAALYLRHRGGPDVAAAIDAQSAYPHSDIVELSATVPIGRASLLLSAGHY
EEEECHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHEEEECCCC
RKVADSDGNADSYGIRFDYPLSKRTVLYTGAAMVRNGAHARFVVNGAAGGGVAVAAAGAT
EEECCCCCCCCCEEEEEECCCCCCEEEEECHHHHCCCCCEEEEEECCCCCCEEEEECCCC
ASSLVAGIVTSF
HHHHHHHHHHCC
>Mature Secondary Structure 
TDSNGRAGRLAVPLAALLACAALPAAAQSSVTLYGRIDTAIEYANAGPNHVTRMGSGNL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHEECCCCCCCEEECCCCCE
WASQWGLKGVEDLGGGYATIFKLEDGFNAASGALSNPSALFGREAWVGITGPFGGVQFGE
EHHHCCCCCHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCHHH
LYTILHTTLVTYSLPGLGAGLAWGNATNNFVGPAFLRVRNSLRYTSPRYAGFMLRAMAAR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GANGAAGQPSTLGDTYGAGINYVRGGLSIDVDYMQQTFSPVAASTLGATSRAANGNYTLG
CCCCCCCCCCCCCCHHCCCCHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
AISYDFRVVKIAALYLRHRGGPDVAAAIDAQSAYPHSDIVELSATVPIGRASLLLSAGHY
EEEECHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHEEEECCCC
RKVADSDGNADSYGIRFDYPLSKRTVLYTGAAMVRNGAHARFVVNGAAGGGVAVAAAGAT
EEECCCCCCCCCEEEEEECCCCCCEEEEECHHHHCCCCCEEEEEECCCCCCEEEEECCCC
ASSLVAGIVTSF
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]