Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184866

Identifier: 189184866

GI number: 189184866

Start: 1998151

End: 1998867

Strand: Reverse

Name: 189184866

Synonym: OTT_1959

Alternate gene names: NA

Gene position: 1998867-1998151 (Counterclockwise)

Preceding gene: 189184867

Following gene: 189184864

Centisome position: 99.5

GC content: 31.52

Gene sequence:

>717_bases
ATGCTGCCCAAAAGAAAAAGACTAGCAGATTATTATCCACTAATGCCAGAAGATGCAGTTATACTGCAACGTATGTCTAG
TAGAAGCTTCAACATATACTTCATAAATCAATTACTGTTGAAGTTATCAAATAAATATTCATTCCGTCATTTTGCAAATA
AGACAGTAGTGCTAAACTATATAGCAAAAGCCTTAGCAAATGAATTACTAACTACTGATCATGCTAATAGTGGAAATTTT
AGATTTAATGATGTAGGAAGATTTAAAGAACAGTATCTAGCAAACATTGAATCTGATACAGATCGTAGTATGAAGGCTCA
GTTGAAGCGTAAAATAGCTAGAGTTTTTGAAGCGGATATTGCTTATCAAATTTTAACATCTTGTGATTTTGGGGCAGCGG
TTAAAAACAAATATTACATCAAGTTGCTTAAGAATATTTTACTGTCAGATCACATTAAATTCAAGATACTACAGGAAGTA
CGAACTGTGCATAGCAACGATATTGAGAGGTTACAAATTATACCATTTGATGAATCAAAACAAGTTACCAATAGCACAAC
GGAGTATCAAAAAACAACAGTTTTACAGCAACAAATAAGTGATGAGAATTACCTTTCAGAACTTAGTAAAGAGCTAGGAT
CTAACTCTATATTGTTCAAAGTACGAAAATACATACTTCAACATTACGAATATGAGCAAGTTATTGATAAAATATAG

Upstream 100 bases:

>100_bases
GTGATTTTAGCAATAAAAAGCCATTAAACAAGGATTATGAGCAAAATAGTGAGTTATCAACTCCAGCTATTACTAAGGAT
TTAGAGGTTGAAAAGAATGA

Downstream 100 bases:

>100_bases
TTTAGTGAATTAGAAATTGTAAATGAAGATAATGTTAATAATAACATGTCTATAGATACCGTGATAAGAATCAAGAAAAG
AAATAATAATTTTATAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLPKRKRLADYYPLMPEDAVILQRMSSRSFNIYFINQLLLKLSNKYSFRHFANKTVVLNYIAKALANELLTTDHANSGNF
RFNDVGRFKEQYLANIESDTDRSMKAQLKRKIARVFEADIAYQILTSCDFGAAVKNKYYIKLLKNILLSDHIKFKILQEV
RTVHSNDIERLQIIPFDESKQVTNSTTEYQKTTVLQQQISDENYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKI

Sequences:

>Translated_238_residues
MLPKRKRLADYYPLMPEDAVILQRMSSRSFNIYFINQLLLKLSNKYSFRHFANKTVVLNYIAKALANELLTTDHANSGNF
RFNDVGRFKEQYLANIESDTDRSMKAQLKRKIARVFEADIAYQILTSCDFGAAVKNKYYIKLLKNILLSDHIKFKILQEV
RTVHSNDIERLQIIPFDESKQVTNSTTEYQKTTVLQQQISDENYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKI
>Mature_238_residues
MLPKRKRLADYYPLMPEDAVILQRMSSRSFNIYFINQLLLKLSNKYSFRHFANKTVVLNYIAKALANELLTTDHANSGNF
RFNDVGRFKEQYLANIESDTDRSMKAQLKRKIARVFEADIAYQILTSCDFGAAVKNKYYIKLLKNILLSDHIKFKILQEV
RTVHSNDIERLQIIPFDESKQVTNSTTEYQKTTVLQQQISDENYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27956; Mature: 27956

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPKRKRLADYYPLMPEDAVILQRMSSRSFNIYFINQLLLKLSNKYSFRHFANKTVVLNY
CCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHCCHHHHHH
IAKALANELLTTDHANSGNFRFNDVGRFKEQYLANIESDTDRSMKAQLKRKIARVFEADI
HHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AYQILTSCDFGAAVKNKYYIKLLKNILLSDHIKFKILQEVRTVHSNDIERLQIIPFDESK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
QVTNSTTEYQKTTVLQQQISDENYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKI
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure
MLPKRKRLADYYPLMPEDAVILQRMSSRSFNIYFINQLLLKLSNKYSFRHFANKTVVLNY
CCCCHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCHHHHHHHCCHHHHHH
IAKALANELLTTDHANSGNFRFNDVGRFKEQYLANIESDTDRSMKAQLKRKIARVFEADI
HHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
AYQILTSCDFGAAVKNKYYIKLLKNILLSDHIKFKILQEVRTVHSNDIERLQIIPFDESK
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
QVTNSTTEYQKTTVLQQQISDENYLSELSKELGSNSILFKVRKYILQHYEYEQVIDKI
HHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA