Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184838
Identifier: 189184838
GI number: 189184838
Start: 1965149
End: 1965547
Strand: Reverse
Name: 189184838
Synonym: OTT_1931
Alternate gene names: NA
Gene position: 1965547-1965149 (Counterclockwise)
Preceding gene: 189184839
Following gene: 189184837
Centisome position: 97.84
GC content: 30.08
Gene sequence:
>399_bases ATGAAAGAAAAGAAGAAAACAATTAACCAATGGATGGTACAAATTCCTCCAATACCAATTACGTTGATGAATGGAGAGAG TGAGAATATCGATGAATATATGGAAATAATAACAAAGCTAAGAAAAGCGAAGTATCAGGTTGAGGCAGCTGAATCATTGA AAGAATATTGTACAGATTTAATACAGGAGATTAAATATAGATTTAATATTGCAACGAGTGAAATTGTAAGGCTTGCAAGC GAGATCATGTTAAATGATTGGGAAAACAAAGATAAGCTGAAAACAATATTAAATCGATCAGCAAATCTCCAAGAGTACTG TAATGATGTAGTTTACACGCTTAGAAGCGAAATTGAGCATGAAAATTTATGTTTAAAAAAATATTGTATAATTTATTAA
Upstream 100 bases:
>100_bases TCAGATGAAAGGGAATCTACGAGTGAAAGAGCGCAATAATTATGTAACTTTTTCATTTGATGTACCAACAATAGTTTGAA TTATTCTTTAGGAGAATGCT
Downstream 100 bases:
>100_bases AGATTATTTAGAGATGAAAAATGATAGACTTTTATAGCGAAAGCTTACTAAATAAGCTGTTTGAAACCAACGTAAGATTT GACACTAAAATTGATCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKEKKKTINQWMVQIPPIPITLMNGESENIDEYMEIITKLRKAKYQVEAAESLKEYCTDLIQEIKYRFNIATSEIVRLAS EIMLNDWENKDKLKTILNRSANLQEYCNDVVYTLRSEIEHENLCLKKYCIIY
Sequences:
>Translated_132_residues MKEKKKTINQWMVQIPPIPITLMNGESENIDEYMEIITKLRKAKYQVEAAESLKEYCTDLIQEIKYRFNIATSEIVRLAS EIMLNDWENKDKLKTILNRSANLQEYCNDVVYTLRSEIEHENLCLKKYCIIY >Mature_132_residues MKEKKKTINQWMVQIPPIPITLMNGESENIDEYMEIITKLRKAKYQVEAAESLKEYCTDLIQEIKYRFNIATSEIVRLAS EIMLNDWENKDKLKTILNRSANLQEYCNDVVYTLRSEIEHENLCLKKYCIIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15716; Mature: 15716
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKKKTINQWMVQIPPIPITLMNGESENIDEYMEIITKLRKAKYQVEAAESLKEYCTDL CCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQEIKYRFNIATSEIVRLASEIMLNDWENKDKLKTILNRSANLQEYCNDVVYTLRSEIEH HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ENLCLKKYCIIY HHHHHHHHHHCC >Mature Secondary Structure MKEKKKTINQWMVQIPPIPITLMNGESENIDEYMEIITKLRKAKYQVEAAESLKEYCTDL CCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQEIKYRFNIATSEIVRLASEIMLNDWENKDKLKTILNRSANLQEYCNDVVYTLRSEIEH HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ENLCLKKYCIIY HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA