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The map label for this gene is traA [H]

Identifier: 189184834

GI number: 189184834

Start: 1960596

End: 1962608

Strand: Reverse

Name: traA [H]

Synonym: OTT_1927

Alternate gene names: 189184834

Gene position: 1962608-1960596 (Counterclockwise)

Preceding gene: 189184836

Following gene: 189184833

Centisome position: 97.69

GC content: 33.13

Gene sequence:

>2013_bases
GTGAGAATTGGTATTGAGATGGCTATACAGTTTACAAGGATTGAATTTTTAACTAGAAGTAAAGGAGGTGATAGTTGTCG
TAAGGCAGCTTATAATGCAAGAACTATTGTTGAAAACGAGAAGACAGGTATAAAGTATAACTTCTCTCGTAAGAAAGATA
ACGTATATCATACAGTGCTGATACCGGATTATATAAATCAAGAATTCAAGAATATTCAAACATTAATGAATGAGGTAGAA
CGAACCGCAAAAAACCAAAAAAACAGCCAGTTGTTGAAGGATATAGTAATAGCATTGCCAGACGAGAAGGAGCTAAATTT
AGAGCATAGAATAGAAATAACTCATCAAATAGTTGATGCGATGGAATGGGTGCAAAATGGTCTTGGAGTACAGATAGATA
TTCATAAGCCTCATACAGGAGATAAAAACTGGCATGCACATATATTGCTTACTATAAGAAGATTTAGAGAAGATGGAACT
GGTTTAGGAGATATAGCAGTAGATTTAAACCCAAAAATTATAACATTAAGTAATGGCAAAAAGGTTGTTATTAAAGATCC
AGAGATGATTCATGAAATAGTAAAAGACATAATTAATGCATATTTCGCTAAATTAGGCTTACCATATAGAGTTGACGAGA
TAAGCGAAGTGCCTGGAGAGCATATGGGGCGTATTAAAATTAGGAGTTTAATTAATAAAGTAGTAAATGAAAATGAGTTA
CGTAAAGAGGCTCATTTGAAGATTATTAATGATGCTGACGTAATAACAGATTCTATAACACATTACAAATCTATTTTTAC
TAAGCAGGATATTGAAAAAGCAGTAAAAGATATACCAGATCTAACAGCAAGAGAACAGTTAGTTCAGCAAGTGCTTAGTT
CAAATAGAATACTAGAGTTATACCATGATGATGGTGAAAGTAGCAAATATTTTACGACAATTGAGGTTCGAAATGAGGAG
ACGAGAATAATCAGAATAGCTAATAAAATCAATGATCAGGTTTATTACAACGATATTTACAATCTTAAAAGTGATATCGA
AGGTCTAGCAAATGTTAGTGAAGAACAGAAACAAGCTCTAAGGCATATTTTGCTTAGCACTAGTGGAGTTAGAGTCTTGA
GAGGAAGAGCTGGTACAGGAAAATCTTATGTTTTAATAAAAGCGCATAAGCTCGCAACAAATCGTAGACAAAAAGTTATT
GGTCTTGCTCCTACTCATAAGGCAGTATCAGAGCTGAGGAGCAAAGGTTATACAGAGGTCTATACAGTAAAAGGATTTTT
GTATAATCGAAAAAAAAATTTTATGCAAGGCAGCTTAATAGTAGTAGATGAAGCTGGAATGGTAGGTACTAAAGCTTATG
CAGAGCTGTTTAGAGTAGTTAGAAACAATAATTGTCAACTGATACTTGCTGGAGATGAAAAGCAGTTAGCTTCAATAGAA
AGAGGTGGAATGTTTGAGATGCTGAGTAATATTTTTGGTTCACATGTTTTAGTAAATATTCGAAGACAAAGTAAAAACTG
GAGCAGAGAAGCAGCAACAAAGTTTGCTGAGAGTAATATTTTAAGCTGTATAACCTTACTGAGGCAAAATAAATGCGTTA
GGTTTGATAATACGTTGCAGGACTCAATGAGTAAATTAATATACAACTGGAGTCTAAGCAAATTTAAACCACATGAAAAA
TTGGTAATTACAGTACGTAATAAAGATGTCGACATTCTTAATTCAAGTATTAGGTCTTTGTTAAAAGCAAATGGTACGCT
AAAAGGCACAGAATATGAGCGTTCTATTGATGGAAGGAAAAAGTCATATATGGCAGGAGATAGAATCGTATTTCAAAAAA
GCTATAAGGATTTACAAATACAAAACAGTGAATTTGCAACTTTAACTTCGGTTAGTAAAAATAAATTTATAGCTAAGACA
GACACAGGAAAAGAAGTGAGTTTTGATTCGGTAAAATACAATTTAAACATGGCTATGCAAGTACTGTTTATAAGGTCCAG
GGAGCTTCTATAA

Upstream 100 bases:

>100_bases
ATTGCTGCTAAAAAATGAGTACTCATTAACCGATTGAATGTTAAAAAAAAAGAAGTTTATGCTAGCAAAATCAAAAAAAC
CATGCTAACTTAAAACTCAG

Downstream 100 bases:

>100_bases
AAGATGTATACGTTTTGCATAACGGAGTAAGTAATATAAGCAGCTCATACGTAGCTATGACAAGGCATATAAAGAGCTTA
AAGTTATATTGCAATAATGA

Product: putative conjugative transfer protein TraA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MRIGIEMAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYINQEFKNIQTLMNEVE
RTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGT
GLGDIAVDLNPKIITLSNGKKVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENEL
RKEAHLKIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEE
TRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVI
GLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIE
RGGMFEMLSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVRFDNTLQDSMSKLIYNWSLSKFKPHEK
LVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRKKSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKT
DTGKEVSFDSVKYNLNMAMQVLFIRSRELL

Sequences:

>Translated_670_residues
MRIGIEMAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYINQEFKNIQTLMNEVE
RTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGT
GLGDIAVDLNPKIITLSNGKKVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENEL
RKEAHLKIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEE
TRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVI
GLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIE
RGGMFEMLSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVRFDNTLQDSMSKLIYNWSLSKFKPHEK
LVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRKKSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKT
DTGKEVSFDSVKYNLNMAMQVLFIRSRELL
>Mature_670_residues
MRIGIEMAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVLIPDYINQEFKNIQTLMNEVE
RTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDAMEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGT
GLGDIAVDLNPKIITLSNGKKVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENEL
RKEAHLKIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILELYHDDGESSKYFTTIEVRNEE
TRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQALRHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVI
GLAPTHKAVSELRSKGYTEVYTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIE
RGGMFEMLSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVRFDNTLQDSMSKLIYNWSLSKFKPHEK
LVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRKKSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKT
DTGKEVSFDSVKYNLNMAMQVLFIRSRELL

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mobA/mobL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000606
- InterPro:   IPR005053
- InterPro:   IPR014136 [H]

Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 76699; Mature: 76699

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGIEMAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVL
CCCCHHHHEEEHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCEEEEECCCCCCEEEEEE
IPDYINQEFKNIQTLMNEVERTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDA
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
MEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIAVDLNPKIITLSNGK
HHHHHCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHCCCCCCEEEEECCCEEEEECCCC
KVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENEL
EEEEECHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCHHHCHHHHHHHHHHHHCHHHH
RKEAHLKIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILEL
HHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE
YHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQAL
EECCCCCCEEEEEEEEECCCCEEEEEEHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHH
RHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTHKAVSELRSKGYTEV
HHHHHCCCCCEEEECCCCCCCEEEEEEEHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEE
YTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIE
EEEEHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
RGGMFEMLSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVRFDNTLQ
CCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHH
DSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRK
HHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCH
KSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTGKEVSFDSVKYNLNMAMQ
HHHCCCCEEEEEECCCCCEECCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEHHHHHH
VLFIRSRELL
HHHHHHHCCC
>Mature Secondary Structure
MRIGIEMAIQFTRIEFLTRSKGGDSCRKAAYNARTIVENEKTGIKYNFSRKKDNVYHTVL
CCCCHHHHEEEHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCCEEEEECCCCCCEEEEEE
IPDYINQEFKNIQTLMNEVERTAKNQKNSQLLKDIVIALPDEKELNLEHRIEITHQIVDA
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
MEWVQNGLGVQIDIHKPHTGDKNWHAHILLTIRRFREDGTGLGDIAVDLNPKIITLSNGK
HHHHHCCCCEEEEEECCCCCCCCCEEEEEEEEHHHHHCCCCCCEEEEECCCEEEEECCCC
KVVIKDPEMIHEIVKDIINAYFAKLGLPYRVDEISEVPGEHMGRIKIRSLINKVVNENEL
EEEEECHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHCCCHHHCHHHHHHHHHHHHCHHHH
RKEAHLKIINDADVITDSITHYKSIFTKQDIEKAVKDIPDLTAREQLVQQVLSSNRILEL
HHHHCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEE
YHDDGESSKYFTTIEVRNEETRIIRIANKINDQVYYNDIYNLKSDIEGLANVSEEQKQAL
EECCCCCCEEEEEEEEECCCCEEEEEEHHHCCCEEEHHHHHHHHHHHHHHCCCHHHHHHH
RHILLSTSGVRVLRGRAGTGKSYVLIKAHKLATNRRQKVIGLAPTHKAVSELRSKGYTEV
HHHHHCCCCCEEEECCCCCCCEEEEEEEHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEE
YTVKGFLYNRKKNFMQGSLIVVDEAGMVGTKAYAELFRVVRNNNCQLILAGDEKQLASIE
EEEEHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
RGGMFEMLSNIFGSHVLVNIRRQSKNWSREAATKFAESNILSCITLLRQNKCVRFDNTLQ
CCCHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHH
DSMSKLIYNWSLSKFKPHEKLVITVRNKDVDILNSSIRSLLKANGTLKGTEYERSIDGRK
HHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCH
KSYMAGDRIVFQKSYKDLQIQNSEFATLTSVSKNKFIAKTDTGKEVSFDSVKYNLNMAMQ
HHHCCCCEEEEEECCCCCEECCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEEHHHHHH
VLFIRSRELL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763953; 11743193; 11743194 [H]