Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184783

Identifier: 189184783

GI number: 189184783

Start: 1917383

End: 1917691

Strand: Reverse

Name: 189184783

Synonym: OTT_1876

Alternate gene names: NA

Gene position: 1917691-1917383 (Counterclockwise)

Preceding gene: 189184784

Following gene: 189184782

Centisome position: 95.46

GC content: 23.62

Gene sequence:

>309_bases
ATGAATAGTAAAATTATGTTGAATATTATAAATTGCGCCATTGTTATAATGATATTTATTGTTGGTTATTACCTATTTGC
AATAAAGAATGATGTAAATAATTTAAATTATCAATTAACTCAAATTGATAAACAGATTAGAGAAGAAGTTAACAATATTA
ATATTATTAAAGCTGAATTATCTCATTTAACTGCTCCAGATAGGTTAAGAAAACTATCTACTAATCATCTACATCTTCGT
AATATTCATACATCTCAAATGATAGATGATTTACTATCAACTGAAGAGGCTATTAATAAAGACAGTTAA

Upstream 100 bases:

>100_bases
TTATATTTATTAACTAAGAAAATAGCAGTACCAACTAGAACAGAGATTATCAATAATCCTAGATCTAGATCTGCAAGATT
AAGGGCGGCATTAAAAATTA

Downstream 100 bases:

>100_bases
CGAGATTGTTACTACCCTTTAAGAGAATTGTTTTAAAACGCATCAATTATTTGTTTATAGTCATTTACAATGAAGTTTGC
GTATAAAATATCATGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAELSHLTAPDRLRKLSTNHLHLR
NIHTSQMIDDLLSTEEAINKDS

Sequences:

>Translated_102_residues
MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAELSHLTAPDRLRKLSTNHLHLR
NIHTSQMIDDLLSTEEAINKDS
>Mature_102_residues
MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAELSHLTAPDRLRKLSTNHLHLR
NIHTSQMIDDLLSTEEAINKDS

Specific function: Unknown

COG id: COG5462

COG function: function code S; Predicted secreted (periplasmic) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11807; Mature: 11807

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAEL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
SHLTAPDRLRKLSTNHLHLRNIHTSQMIDDLLSTEEAINKDS
HHCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAEL
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH
SHLTAPDRLRKLSTNHLHLRNIHTSQMIDDLLSTEEAINKDS
HHCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA