Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184783
Identifier: 189184783
GI number: 189184783
Start: 1917383
End: 1917691
Strand: Reverse
Name: 189184783
Synonym: OTT_1876
Alternate gene names: NA
Gene position: 1917691-1917383 (Counterclockwise)
Preceding gene: 189184784
Following gene: 189184782
Centisome position: 95.46
GC content: 23.62
Gene sequence:
>309_bases ATGAATAGTAAAATTATGTTGAATATTATAAATTGCGCCATTGTTATAATGATATTTATTGTTGGTTATTACCTATTTGC AATAAAGAATGATGTAAATAATTTAAATTATCAATTAACTCAAATTGATAAACAGATTAGAGAAGAAGTTAACAATATTA ATATTATTAAAGCTGAATTATCTCATTTAACTGCTCCAGATAGGTTAAGAAAACTATCTACTAATCATCTACATCTTCGT AATATTCATACATCTCAAATGATAGATGATTTACTATCAACTGAAGAGGCTATTAATAAAGACAGTTAA
Upstream 100 bases:
>100_bases TTATATTTATTAACTAAGAAAATAGCAGTACCAACTAGAACAGAGATTATCAATAATCCTAGATCTAGATCTGCAAGATT AAGGGCGGCATTAAAAATTA
Downstream 100 bases:
>100_bases CGAGATTGTTACTACCCTTTAAGAGAATTGTTTTAAAACGCATCAATTATTTGTTTATAGTCATTTACAATGAAGTTTGC GTATAAAATATCATGTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAELSHLTAPDRLRKLSTNHLHLR NIHTSQMIDDLLSTEEAINKDS
Sequences:
>Translated_102_residues MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAELSHLTAPDRLRKLSTNHLHLR NIHTSQMIDDLLSTEEAINKDS >Mature_102_residues MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAELSHLTAPDRLRKLSTNHLHLR NIHTSQMIDDLLSTEEAINKDS
Specific function: Unknown
COG id: COG5462
COG function: function code S; Predicted secreted (periplasmic) protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11807; Mature: 11807
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAEL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH SHLTAPDRLRKLSTNHLHLRNIHTSQMIDDLLSTEEAINKDS HHCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNSKIMLNIINCAIVIMIFIVGYYLFAIKNDVNNLNYQLTQIDKQIREEVNNINIIKAEL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH SHLTAPDRLRKLSTNHLHLRNIHTSQMIDDLLSTEEAINKDS HHCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA