Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184758
Identifier: 189184758
GI number: 189184758
Start: 1882638
End: 1883147
Strand: Reverse
Name: 189184758
Synonym: OTT_1851
Alternate gene names: NA
Gene position: 1883147-1882638 (Counterclockwise)
Preceding gene: 189184759
Following gene: 189184756
Centisome position: 93.74
GC content: 31.18
Gene sequence:
>510_bases ATGAGTATTTTGAAATCACTTTTACAACCGTGTTATGCTGTTATATTAGCATTCGTTGTATTATCTTCACCATCAATATG TACAGCGAATAATAATGTAAACTTCAATGCTTCTAAAAAAGATAGTGTTGATACTTCACAATTTTATCTAAAACTTTCAT CTGGTATTAATACTGACTATTATGGTACATTAGAAGCAGGGATTGGTTATAGACAAGCTCAGCATAGAATGGATATAAGA TTAGGATTTATGTGTCATCACAACTGTAGAGATAACTTTGTTCAAGGAAATTATTATTACAATATAATTGAAGGTAACAA AGCATCAATTTTTGTTACAGGTAGCATAGTATCAGTTCTTGTGTGTTGTAGCAGTACTGGTGTAGGCTTGGGAGTTGGTA CAACAATAAACATATCAAAAGATATATATTTAGACATTGAATGTAGCACAATAGCTAACTATATCCCACTTCCTATTCAT ATACGTTTTGGATCGCGGTTTCATTTCTAA
Upstream 100 bases:
>100_bases GGTTTAACAGACAACTATAGATTAATTCTAGGAAATAGAATTGACAAAAAGTATAATTAATATTAAGTTTATAAAAATAT TAAATTAGATAGATACTGCT
Downstream 100 bases:
>100_bases TAACTAATAAGTTTTATAGTTAGTAATGATTAGCTCATTAACAGTGTTTCGTTGTTGATTGATTGAGTATGTGACTGGAA TATGAGTGATGAAAAAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNASKKDSVDTSQFYLKLSSGINTDYYGTLEAGIGYRQAQHRMDIR LGFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGSIVSVLVCCSSTGVGLGVGTTINISKDIYLDIECSTIANYIPLPIH IRFGSRFHF
Sequences:
>Translated_169_residues MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNASKKDSVDTSQFYLKLSSGINTDYYGTLEAGIGYRQAQHRMDIR LGFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGSIVSVLVCCSSTGVGLGVGTTINISKDIYLDIECSTIANYIPLPIH IRFGSRFHF >Mature_168_residues SILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNASKKDSVDTSQFYLKLSSGINTDYYGTLEAGIGYRQAQHRMDIRL GFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGSIVSVLVCCSSTGVGLGVGTTINISKDIYLDIECSTIANYIPLPIHI RFGSRFHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18673; Mature: 18541
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNASKKDSVDTSQFYLKLSSGINTDY CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCCEEEEECCCCCCCE YGTLEAGIGYRQAQHRMDIRLGFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGSIVSVL EEEEECCCCHHHHHHCCCEEEEEEEECCCCCCEEECCEEEEEEECCCEEEEEEHHHHHHH VCCSSTGVGLGVGTTINISKDIYLDIECSTIANYIPLPIHIRFGSRFHF HHHCCCCCCEECCCEEEECCEEEEEEEHHHHCCCCCEEEEEEECCEECC >Mature Secondary Structure SILKSLLQPCYAVILAFVVLSSPSICTANNNVNFNASKKDSVDTSQFYLKLSSGINTDY HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCCCCCCEEEEECCCCCCCE YGTLEAGIGYRQAQHRMDIRLGFMCHHNCRDNFVQGNYYYNIIEGNKASIFVTGSIVSVL EEEEECCCCHHHHHHCCCEEEEEEEECCCCCCEEECCEEEEEEECCCEEEEEEHHHHHHH VCCSSTGVGLGVGTTINISKDIYLDIECSTIANYIPLPIHIRFGSRFHF HHHCCCCCCEECCCEEEECCEEEEEEEHHHHCCCCCEEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA