Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184756
Identifier: 189184756
GI number: 189184756
Start: 1880698
End: 1881465
Strand: Reverse
Name: 189184756
Synonym: OTT_1849
Alternate gene names: NA
Gene position: 1881465-1880698 (Counterclockwise)
Preceding gene: 189184758
Following gene: 189184755
Centisome position: 93.65
GC content: 28.52
Gene sequence:
>768_bases ATGCCTATAGAAGACGAAGGTCAAAATAAAATCAATAAATTAACTGAAAAATTATCTACAGAGGGAATTAATAGCACAAC AATAAAACAGATAGATACTGAAATGCAAAAACTATACTGCCAGCTAGAGGAGTCTGAGGAAGTAAGCATAAATTGCATAG AGTGGATACAATATTTTAGGCTAATAGTAAATAACTACGACAGAAAAAAAGTAAATATAATAGCTTCTCTAAATGGAATG ATTTTTTTATTTAGACAATACATAGCATCAACGAATGTAAGGATTGAAACATTTAACATAGAATTGCTCATAAATAATAC CGTTATCAGAATGATGGAACATTTTGAAAATGAGAATATAAAGCTAAATGTTCAAAATGACATAAAGACAGTTCTGATTG GAGACAGTTTTCGAATAAAAGCAGTAATAAGTCAGTTAATTGGTAGTGCTATTATAAATAGTAGTAAGAATAGCAAGATT ACTATTAACATCAATCAGTATTCAGAAATATTACAATTTACAGTACAAAACATAGGACTAAGCCCTTCTAAAGAAAAATT AGAAAGAATAAATGCTGAACTAGAGAATTTGAATTTAGTAACGTATCAAGAACTAGGAGAAGGATTAGCATTTATAAAAC ATCTTACACATCAGATGAAAGGAAGACTAAGAGCAAAAGAGGAAAATAATTACATAACTTTTTCATTTGAAGTGCCAATA ACTAGTTTTAACTCTTCTTTAGGAGAATGCTATGAAAGCAAAGAATAA
Upstream 100 bases:
>100_bases CAGTAATATTAAGTCTAGAGATCAAATGCTAAAACAACCAAATTTATCCTTTGAATCTCTAGCATAACTATTTTAACACT TAAAACAGCAGGAGAATTCT
Downstream 100 bases:
>100_bases AACAATTAACCAATGGATAGTACAAATCCCTCCAATACCAATTACGTTGGTAAATGGAGAGAGTGAGAATATCGATGAAT ATATGGAAATAATAACAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MPIEDEGQNKINKLTEKLSTEGINSTTIKQIDTEMQKLYCQLEESEEVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMMEHFENENIKLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKI TININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQMKGRLRAKEENNYITFSFEVPI TSFNSSLGECYESKE
Sequences:
>Translated_255_residues MPIEDEGQNKINKLTEKLSTEGINSTTIKQIDTEMQKLYCQLEESEEVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGM IFLFRQYIASTNVRIETFNIELLINNTVIRMMEHFENENIKLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKI TININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQMKGRLRAKEENNYITFSFEVPI TSFNSSLGECYESKE >Mature_254_residues PIEDEGQNKINKLTEKLSTEGINSTTIKQIDTEMQKLYCQLEESEEVSINCIEWIQYFRLIVNNYDRKKVNIIASLNGMI FLFRQYIASTNVRIETFNIELLINNTVIRMMEHFENENIKLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKIT ININQYSEILQFTVQNIGLSPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQMKGRLRAKEENNYITFSFEVPIT SFNSSLGECYESKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29445; Mature: 29314
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEDEGQNKINKLTEKLSTEGINSTTIKQIDTEMQKLYCQLEESEEVSINCIEWIQYFR CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LIVNNYDRKKVNIIASLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMMEHFENENI HHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHHCCCCE KLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKITININQYSEILQFTVQNIGL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC SPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQMKGRLRAKEENNYITFSFEVPI CCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEECH TSFNSSLGECYESKE HHHCHHHHHHHCCCC >Mature Secondary Structure PIEDEGQNKINKLTEKLSTEGINSTTIKQIDTEMQKLYCQLEESEEVSINCIEWIQYFR CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LIVNNYDRKKVNIIASLNGMIFLFRQYIASTNVRIETFNIELLINNTVIRMMEHFENENI HHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEEEEEEEECHHHHHHHHHHCCCCE KLNVQNDIKTVLIGDSFRIKAVISQLIGSAIINSSKNSKITININQYSEILQFTVQNIGL EEEECCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCC SPSKEKLERINAELENLNLVTYQELGEGLAFIKHLTHQMKGRLRAKEENNYITFSFEVPI CCCHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEEECH TSFNSSLGECYESKE HHHCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA