Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184601
Identifier: 189184601
GI number: 189184601
Start: 1719880
End: 1720320
Strand: Reverse
Name: 189184601
Synonym: OTT_1694
Alternate gene names: NA
Gene position: 1720320-1719880 (Counterclockwise)
Preceding gene: 189184603
Following gene: 189184598
Centisome position: 85.63
GC content: 41.5
Gene sequence:
>441_bases ATGCTGTGTACAGCCATTGTTTCCCTCTTGCATTCTTACTTTTCTGCTAACCCTTCGCTCTACCAACATTACTTGGTTTC ATCACTACTATGGTTAACTCAGCCATCCTTACACCATCTCCAAAGCCTTATGTTTCAACACTTGTACTTTGAATACTTAC TTAATTACGTAAGAGTTATAAGGACTTCTCAAGTTGTGTCATTAATCTTTACAAACTCGCTGACGCCTGCGACCCCGGTG GTTGAAAATTTTTGGATTTTCACTAGTTTGACCTCCAATCTTCTTTTGCCTACTATGTGGTTGAACATATCGGCTTCCAC AACATCATACTTTCAGGGCTATCACGTTCACCATTCGGTTTCGGCTCTAATGTTTCGCTGTCTACGCTTTACTACTGTCG TTACCTTCAGCAGCACAAGACTCGCTATATGGTGGATCTAG
Upstream 100 bases:
>100_bases TAAATCGATAATATGTCCAAGATTATTAAACTTTATGTCTTGATTTTTCGATGATAGCAACTTTATACGCTCAAGTTTCG TTAACCATGTATTTCTGTCT
Downstream 100 bases:
>100_bases CTTCTCCTTCCATAACTGGACTTTCACCAGTAAGATTAATTCACCTTATCTTGACGCACCTACTATATAGCTAAGCCACT ATAAAACAGTTATAATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLCTAIVSLLHSYFSANPSLYQHYLVSSLLWLTQPSLHHLQSLMFQHLYFEYLLNYVRVIRTSQVVSLIFTNSLTPATPV VENFWIFTSLTSNLLLPTMWLNISASTTSYFQGYHVHHSVSALMFRCLRFTTVVTFSSTRLAIWWI
Sequences:
>Translated_146_residues MLCTAIVSLLHSYFSANPSLYQHYLVSSLLWLTQPSLHHLQSLMFQHLYFEYLLNYVRVIRTSQVVSLIFTNSLTPATPV VENFWIFTSLTSNLLLPTMWLNISASTTSYFQGYHVHHSVSALMFRCLRFTTVVTFSSTRLAIWWI >Mature_146_residues MLCTAIVSLLHSYFSANPSLYQHYLVSSLLWLTQPSLHHLQSLMFQHLYFEYLLNYVRVIRTSQVVSLIFTNSLTPATPV VENFWIFTSLTSNLLLPTMWLNISASTTSYFQGYHVHHSVSALMFRCLRFTTVVTFSSTRLAIWWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16972; Mature: 16972
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCTAIVSLLHSYFSANPSLYQHYLVSSLLWLTQPSLHHLQSLMFQHLYFEYLLNYVRVI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RTSQVVSLIFTNSLTPATPVVENFWIFTSLTSNLLLPTMWLNISASTTSYFQGYHVHHSV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCHHHHHHH SALMFRCLRFTTVVTFSSTRLAIWWI HHHHHHHHHHHHHHEECCCEEEEEEC >Mature Secondary Structure MLCTAIVSLLHSYFSANPSLYQHYLVSSLLWLTQPSLHHLQSLMFQHLYFEYLLNYVRVI CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH RTSQVVSLIFTNSLTPATPVVENFWIFTSLTSNLLLPTMWLNISASTTSYFQGYHVHHSV HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHCHHHHHHH SALMFRCLRFTTVVTFSSTRLAIWWI HHHHHHHHHHHHHHEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA