Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184584
Identifier: 189184584
GI number: 189184584
Start: 1701550
End: 1702620
Strand: Reverse
Name: 189184584
Synonym: OTT_1677
Alternate gene names: NA
Gene position: 1702620-1701550 (Counterclockwise)
Preceding gene: 189184585
Following gene: 189184583
Centisome position: 84.75
GC content: 31.47
Gene sequence:
>1071_bases TTGAGCTTGCAGCAATCAGGCATTAAAGGTAATATCATTGCTAGTGCAGGAATTGCGAATTTGAGAAATTATTCACCATT TCCTGGTGAAAAAATCATCATTGCAGCAGATAATGATAGCAAAAATCCTATAACTAATAATACTGTAATTAAAGCTGCAA AAACGTTAGAAATGAAGGGAGCGATAACTTGTATAGTCAAACCACCAGAAAATGGGGATTTTAATAATCTTCTGCAAACT TGTGGAGACCAGTCAATTAGAGACATTATAGAACCTGAAATTACTAAACTGACTAAGGCAGTTGAAACAACCAAACTTAC TCAAACAGAAAATAATAGTATAGAAAAACAAAATGATATTACGAATGTTAAAGAATTGTATAATAAATCGTCATCTCTAT ACTACTTTAAACAAGAAGAGGAAGCTAAGGTGGAAACGATAGTAGTTAATAAATATCTAGAAAACCATACAGGAATTTAT AGTTCAAAAATCTTTAATAATCCTAATTTAAGGGCAAATATGGTTTTTGATGAAGAGACTCAAAAATCCTGGCATGCACT CACTATTTTTGTTGAAAATGACAAAGATGAAATTACTGGAGCTAAGATATTAGCTCTGAATTCAAAAACATGTAATAAAG CTGATGTAGCTGAAAAATCTGTTGGTACAATTAGTGGGTCATTTGCTGAAATTGCTCAACAAAATTCAAAATACTCACCT GTAACAATCATTACAAAGGATATTGAAACAGCGTTAACCATTAGGCAAGCTGGAGTTGAAGGAAAAATCTTATGTGCAAT TGAAGCCGAAAATTTGCAAAACTATAATCCTGGCCCAAAAGAAAAGATCATTCTAGCAGTTAAAAATGACGTAAATACTG AAAAAGCTGAAAAAGTTCTAGAGGATAAGGAAGCAGTAGTCTGTACAGTCAAAAATGACTTCAATAATGTATTAAAAACT CAAGGATTATATGCTGTTAGAAATATTATCAGCCCTGAAATAAGAAAACTTAATGAAAAAATTGAATCAATACAAACTAA TATACAACCAGGATTATGTCCGAAACACTAG
Upstream 100 bases:
>100_bases TAAAACAATAGGTAAAATCAGCGAATCATTTATAATAATAGCAAAACGAAATGCAAATGACCCTAATATAACAGTTATAG CAGAAGGCGCCGAAACAGCA
Downstream 100 bases:
>100_bases GCAGAGTATGACACAGCATTTTTTATTTAAAAAACTATAGAGTGAAAAAATATGACAAAAAAATTAAAGCATGATTCATT GGCAAAGACAATCATGAGTG
Product: putative conjugative transfer protein TraI
Products: NA
Alternate protein names: Conjugative Transfer Protein TraI; Conjugal Transfer Protein TraA; MobA/MobL Family Protein
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSLQQSGIKGNIIASAGIANLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQT CGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTGIY SSKIFNNPNLRANMVFDEETQKSWHALTIFVENDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSP VTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKT QGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
Sequences:
>Translated_356_residues MSLQQSGIKGNIIASAGIANLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQT CGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTGIY SSKIFNNPNLRANMVFDEETQKSWHALTIFVENDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSP VTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKT QGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH >Mature_355_residues SLQQSGIKGNIIASAGIANLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKGAITCIVKPPENGDFNNLLQTC GDQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTGIYS SKIFNNPNLRANMVFDEETQKSWHALTIFVENDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSPV TIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVLEDKEAVVCTVKNDFNNVLKTQ GLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39406; Mature: 39275
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQQSGIKGNIIASAGIANLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKG CCCCCCCCCCEEEEECCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECC AITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNDI EEEEEEECCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCHHHHH TNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTGIYSSKIFNNPNLRANMVFDEET HHHHHHHCCCCCEEEEECCCCCCEEEEEEHHHHHHCCCCCHHHHCCCCCCEEEEEECCHH QKSWHALTIFVENDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSP CCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCC VTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVL EEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH EDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH CCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SLQQSGIKGNIIASAGIANLRNYSPFPGEKIIIAADNDSKNPITNNTVIKAAKTLEMKG CCCCCCCCCEEEEECCHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHEEECC AITCIVKPPENGDFNNLLQTCGDQSIRDIIEPEITKLTKAVETTKLTQTENNSIEKQNDI EEEEEEECCCCCCHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCCCHHHHH TNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLENHTGIYSSKIFNNPNLRANMVFDEET HHHHHHHCCCCCEEEEECCCCCCEEEEEEHHHHHHCCCCCHHHHCCCCCCEEEEEECCHH QKSWHALTIFVENDKDEITGAKILALNSKTCNKADVAEKSVGTISGSFAEIAQQNSKYSP CCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCC VTIITKDIETALTIRQAGVEGKILCAIEAENLQNYNPGPKEKIILAVKNDVNTEKAEKVL EEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH EDKEAVVCTVKNDFNNVLKTQGLYAVRNIISPEIRKLNEKIESIQTNIQPGLCPKH CCCCEEEEEECCHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA