Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
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Accession | NC_010793 |
Length | 2,008,987 |
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The map label for this gene is 189184563
Identifier: 189184563
GI number: 189184563
Start: 1686162
End: 1687052
Strand: Reverse
Name: 189184563
Synonym: OTT_1656
Alternate gene names: NA
Gene position: 1687052-1686162 (Counterclockwise)
Preceding gene: 189184564
Following gene: 189184558
Centisome position: 83.98
GC content: 29.18
Gene sequence:
>891_bases TTGAGCGATTGGTTAGGTCTACTCACACAGGGACTTTTTTTTGACAAAAGATATTATGTTACTTATAACGCTAATACTGG CAGTGAAAGTGAATGTGATAAATTTTTACTGAATACTAAAAAAATAATTACGTCATGTATAAATAATCAAGAAGATACCC TATCAGATGAATTAGTTAAATCCGTTCTCAATGATAACAAATTAAAAAACAAACTTGTGGATTCTGTATTTAAGCTTAAT ACTGGATATATTGGACAATCTAAACAGCTTATATTTGGCATCATGAGAAATATAAAAACGCATTACAAGCAAGCTAAGCT TGCCACAACAACAGCAGATGATCGACGTGAGCATTATAATTTTCTTTGTGAAGCATATAGTCAGATAAAAGATTTTCTCA ATAGTAACGAAGTTTTAGGTAAAAATTATCGTTTAATTAATCAAGTTAAATTATCACTGTCAGAATTTTATAAAATAAAC CTTAATATAAAAAGGGTATGCAGCTATTTTAAAGACAATGGGGATTTCATTAAAAATTTAATAATAATTCAGAATCACTC TACTCCTAATAATCAAATACATGCTGAAATGATTTTGTTAGAACATATCCACAGTGATTATCATGAGTCATATAATAGTG AAGCATATATTGGAATATCAAAATTATCTTGTATGCCTTGTAGTAAAGTTATTAAGCTTTATAATGAGAGTGCAAATAAT CTTGATGTTGAATACCATGGTACACATGGGAAAGTATATGAAAACTGGGACTATCCAAGCAAAATATGTTCCATTGTATC AGAAGAGCACTTTGTTAGTGAATTAGAAAATTGTGAATCATTATTTCTCCCTCTAGGAAGAGATGATGCTACTACTAGTG ATTCTAACTAA
Upstream 100 bases:
>100_bases GTCTCAATGTTCTAGACAACAAATAAGGCATAATGCTTATCTTATTTTTGAGAGCCAGAATGCGGTAATTCTGCAAGTCC GGTTCTGAGGAGGGGCCTAA
Downstream 100 bases:
>100_bases TTAGAAGAATAGCAAAAACAAGATTTGCAACAAACTGTTATTTGCTTTAGGAGTTAGCTAAGAATAAGGAAAAAAACTGC TAATAATCACCGTTTTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSDWLGLLTQGLFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDTLSDELVKSVLNDNKLKNKLVDSVFKLN TGYIGQSKQLIFGIMRNIKTHYKQAKLATTTADDRREHYNFLCEAYSQIKDFLNSNEVLGKNYRLINQVKLSLSEFYKIN LNIKRVCSYFKDNGDFIKNLIIIQNHSTPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANN LDVEYHGTHGKVYENWDYPSKICSIVSEEHFVSELENCESLFLPLGRDDATTSDSN
Sequences:
>Translated_296_residues MSDWLGLLTQGLFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDTLSDELVKSVLNDNKLKNKLVDSVFKLN TGYIGQSKQLIFGIMRNIKTHYKQAKLATTTADDRREHYNFLCEAYSQIKDFLNSNEVLGKNYRLINQVKLSLSEFYKIN LNIKRVCSYFKDNGDFIKNLIIIQNHSTPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANN LDVEYHGTHGKVYENWDYPSKICSIVSEEHFVSELENCESLFLPLGRDDATTSDSN >Mature_295_residues SDWLGLLTQGLFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDTLSDELVKSVLNDNKLKNKLVDSVFKLNT GYIGQSKQLIFGIMRNIKTHYKQAKLATTTADDRREHYNFLCEAYSQIKDFLNSNEVLGKNYRLINQVKLSLSEFYKINL NIKRVCSYFKDNGDFIKNLIIIQNHSTPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANNL DVEYHGTHGKVYENWDYPSKICSIVSEEHFVSELENCESLFLPLGRDDATTSDSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34133; Mature: 34002
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDWLGLLTQGLFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDTLSDELVK CCHHHHHHHHHHEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SVLNDNKLKNKLVDSVFKLNTGYIGQSKQLIFGIMRNIKTHYKQAKLATTTADDRREHYN HHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FLCEAYSQIKDFLNSNEVLGKNYRLINQVKLSLSEFYKINLNIKRVCSYFKDNGDFIKNL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCHHHEEE IIIQNHSTPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANN EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHCCCCC LDVEYHGTHGKVYENWDYPSKICSIVSEEHFVSELENCESLFLPLGRDDATTSDSN CEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SDWLGLLTQGLFFDKRYYVTYNANTGSESECDKFLLNTKKIITSCINNQEDTLSDELVK CHHHHHHHHHHEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SVLNDNKLKNKLVDSVFKLNTGYIGQSKQLIFGIMRNIKTHYKQAKLATTTADDRREHYN HHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FLCEAYSQIKDFLNSNEVLGKNYRLINQVKLSLSEFYKINLNIKRVCSYFKDNGDFIKNL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCHHHEEE IIIQNHSTPNNQIHAEMILLEHIHSDYHESYNSEAYIGISKLSCMPCSKVIKLYNESANN EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCCHHHHHHHHHCCCCC LDVEYHGTHGKVYENWDYPSKICSIVSEEHFVSELENCESLFLPLGRDDATTSDSN CEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA