Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184501

Identifier: 189184501

GI number: 189184501

Start: 1627134

End: 1628414

Strand: Reverse

Name: 189184501

Synonym: OTT_1594

Alternate gene names: NA

Gene position: 1628414-1627134 (Counterclockwise)

Preceding gene: 189184511

Following gene: 189184499

Centisome position: 81.06

GC content: 33.8

Gene sequence:

>1281_bases
ATGAGAAAGTTTATTAAAGTAAATAGTATAAAATTAGTTAATGTATTGTACTTGAGTAGTGTGTTTTTTGTTAGCAATGC
TTTTGCAGAGATTACTCACAAGTTTAGTGGGGCATTTAGTTTTGAAGCTGGAGTTCCTTATTATCATTTTGAGCCGCATA
GTGATAATGTCTCAGCTTATAGAAAAAATGTAGGATTATATTCAGAAGGGAATGTAAGTCTTAGTGTACAAGATGAGTTA
GAGAATATAAGTTACGGTGGTAAAGTAGTATTGCATACTACTACAAAAGCTAAAGGAGCTGCATCTTTAAATGGGTCCAG
GCTTTTTATAAAATCTAAAATTGGGTTAATGGAGTTTGGATCTCAGCATAGCATAGCTAAAGTGATGCAAATTAGCCCTA
AGACCTGCGGAGCGATGGGAACATGGTCTAGATATGCAAAATTTCCAGAAAATTATGTATTTGCAGCTAGCAGTAGTTTG
CCTATAGAAGCATTCTCAACTAATGCTGTTGGATATTCAGGGACTGAGTCTGCAAGGAAGATATCATATTTCACTCCTGA
ATATCATGGATTAATATTGGGCGTTTCATATATTCCTGATACTAGTAATAGTACTGGCAATGTTGGAGATGATACTACTA
CTAAAGCTATAGTTATAAAGTTACCAGGGTGTACCAATAGATATGTTCAATACAGATTGGTAGCAACTGATGCTTGGGTA
GGTGGAATAAATTATAAACATAACTTTCAAAGTGGTTCTAGTATTAAGCTAGGTGCAGTTATAGAATATGGTAATGCTCT
TCCAATGAAGGTATACAATAATCCAGAATGTAAGAGTGAACATAAAATTGATGATGTTATTAATGTTAAAGATATACTAG
CTTATAGTCTTGGAGTTAGCTTAAGCAAAGAGAATATTCATTGTGGAGTATCTTATAGTACATGGGGAGATAGTTTTTTC
AGTGATGAGATTGTAACAAAACCTAAGAGTGATTCTTGGAGTATAGGCATTGCTTATGTAGAAGTTCCGATAGGTGTTAG
TCTTGAATGGTCTTATAACACTTATGGAGATCGTAATAGTAGGCACGCTATAACTTTTGGCAGTGATTATCAATTGGCTG
AAGGATTGTCAGCATACTTTGATCTTAGTTATTTTGTAGCTAAAGGAAGCAAGGTATTATTAGATAATGATCCTAAAAAG
ACGCAGATAGCAAGTTATGACGATCAAGTCAAACCTTTTAGTGGAATATGCGGTATTCTTGGTATTAAAATTAAATTTTA
A

Upstream 100 bases:

>100_bases
ATATATTAAGTTATGCTTCTTTCTAAGGTGGCATACAAGCATTTTTATGTTAGTGCTTGATAATATTGCTTATATTACTT
TGAAATTTTAAGGGGTAGTT

Downstream 100 bases:

>100_bases
TGAAGGCAACAACACCTTCATTAAAATTTAATACCTTGATAAAATACATATAGCAAAACTTTACTTTACTCTATAAAGAT
TGAGCTATCTATATGATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAYRKNVGLYSEGNVSLSVQDEL
ENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFGSQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSL
PIEAFSTNAVGYSGTESARKISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV
GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVSLSKENIHCGVSYSTWGDSFF
SDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNSRHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKK
TQIASYDDQVKPFSGICGILGIKIKF

Sequences:

>Translated_426_residues
MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAYRKNVGLYSEGNVSLSVQDEL
ENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFGSQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSL
PIEAFSTNAVGYSGTESARKISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV
GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVSLSKENIHCGVSYSTWGDSFF
SDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNSRHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKK
TQIASYDDQVKPFSGICGILGIKIKF
>Mature_426_residues
MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAYRKNVGLYSEGNVSLSVQDEL
ENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFGSQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSL
PIEAFSTNAVGYSGTESARKISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV
GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVSLSKENIHCGVSYSTWGDSFF
SDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNSRHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKK
TQIASYDDQVKPFSGICGILGIKIKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46758; Mature: 46758

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAY
CCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCCHHHH
RKNVGLYSEGNVSLSVQDELENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFG
HHCCCEEECCCEEEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCC
SQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSLPIEAFSTNAVGYSGTESARK
CCCCHHHHHEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCE
ISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV
EEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEE
GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVS
CCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHCCE
LSKENIHCGVSYSTWGDSFFSDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNS
EECCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCC
RHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKKTQIASYDDQVKPFSGICGIL
CEEEEECCCCCHHHHHHHHHEEEEEEECCCEEEECCCCCCCEECCCCCCCCCCCCCEEEE
GIKIKF
EEEEEC
>Mature Secondary Structure
MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAY
CCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCCHHHH
RKNVGLYSEGNVSLSVQDELENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFG
HHCCCEEECCCEEEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCC
SQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSLPIEAFSTNAVGYSGTESARK
CCCCHHHHHEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCE
ISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV
EEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEE
GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVS
CCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHCCE
LSKENIHCGVSYSTWGDSFFSDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNS
EECCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCC
RHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKKTQIASYDDQVKPFSGICGIL
CEEEEECCCCCHHHHHHHHHEEEEEEECCCEEEECCCCCCCEECCCCCCCCCCCCCEEEE
GIKIKF
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]