| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184501
Identifier: 189184501
GI number: 189184501
Start: 1627134
End: 1628414
Strand: Reverse
Name: 189184501
Synonym: OTT_1594
Alternate gene names: NA
Gene position: 1628414-1627134 (Counterclockwise)
Preceding gene: 189184511
Following gene: 189184499
Centisome position: 81.06
GC content: 33.8
Gene sequence:
>1281_bases ATGAGAAAGTTTATTAAAGTAAATAGTATAAAATTAGTTAATGTATTGTACTTGAGTAGTGTGTTTTTTGTTAGCAATGC TTTTGCAGAGATTACTCACAAGTTTAGTGGGGCATTTAGTTTTGAAGCTGGAGTTCCTTATTATCATTTTGAGCCGCATA GTGATAATGTCTCAGCTTATAGAAAAAATGTAGGATTATATTCAGAAGGGAATGTAAGTCTTAGTGTACAAGATGAGTTA GAGAATATAAGTTACGGTGGTAAAGTAGTATTGCATACTACTACAAAAGCTAAAGGAGCTGCATCTTTAAATGGGTCCAG GCTTTTTATAAAATCTAAAATTGGGTTAATGGAGTTTGGATCTCAGCATAGCATAGCTAAAGTGATGCAAATTAGCCCTA AGACCTGCGGAGCGATGGGAACATGGTCTAGATATGCAAAATTTCCAGAAAATTATGTATTTGCAGCTAGCAGTAGTTTG CCTATAGAAGCATTCTCAACTAATGCTGTTGGATATTCAGGGACTGAGTCTGCAAGGAAGATATCATATTTCACTCCTGA ATATCATGGATTAATATTGGGCGTTTCATATATTCCTGATACTAGTAATAGTACTGGCAATGTTGGAGATGATACTACTA CTAAAGCTATAGTTATAAAGTTACCAGGGTGTACCAATAGATATGTTCAATACAGATTGGTAGCAACTGATGCTTGGGTA GGTGGAATAAATTATAAACATAACTTTCAAAGTGGTTCTAGTATTAAGCTAGGTGCAGTTATAGAATATGGTAATGCTCT TCCAATGAAGGTATACAATAATCCAGAATGTAAGAGTGAACATAAAATTGATGATGTTATTAATGTTAAAGATATACTAG CTTATAGTCTTGGAGTTAGCTTAAGCAAAGAGAATATTCATTGTGGAGTATCTTATAGTACATGGGGAGATAGTTTTTTC AGTGATGAGATTGTAACAAAACCTAAGAGTGATTCTTGGAGTATAGGCATTGCTTATGTAGAAGTTCCGATAGGTGTTAG TCTTGAATGGTCTTATAACACTTATGGAGATCGTAATAGTAGGCACGCTATAACTTTTGGCAGTGATTATCAATTGGCTG AAGGATTGTCAGCATACTTTGATCTTAGTTATTTTGTAGCTAAAGGAAGCAAGGTATTATTAGATAATGATCCTAAAAAG ACGCAGATAGCAAGTTATGACGATCAAGTCAAACCTTTTAGTGGAATATGCGGTATTCTTGGTATTAAAATTAAATTTTA A
Upstream 100 bases:
>100_bases ATATATTAAGTTATGCTTCTTTCTAAGGTGGCATACAAGCATTTTTATGTTAGTGCTTGATAATATTGCTTATATTACTT TGAAATTTTAAGGGGTAGTT
Downstream 100 bases:
>100_bases TGAAGGCAACAACACCTTCATTAAAATTTAATACCTTGATAAAATACATATAGCAAAACTTTACTTTACTCTATAAAGAT TGAGCTATCTATATGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAYRKNVGLYSEGNVSLSVQDEL ENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFGSQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSL PIEAFSTNAVGYSGTESARKISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVSLSKENIHCGVSYSTWGDSFF SDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNSRHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKK TQIASYDDQVKPFSGICGILGIKIKF
Sequences:
>Translated_426_residues MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAYRKNVGLYSEGNVSLSVQDEL ENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFGSQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSL PIEAFSTNAVGYSGTESARKISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVSLSKENIHCGVSYSTWGDSFF SDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNSRHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKK TQIASYDDQVKPFSGICGILGIKIKF >Mature_426_residues MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAYRKNVGLYSEGNVSLSVQDEL ENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFGSQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSL PIEAFSTNAVGYSGTESARKISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVSLSKENIHCGVSYSTWGDSFF SDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNSRHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKK TQIASYDDQVKPFSGICGILGIKIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46758; Mature: 46758
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAY CCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCCHHHH RKNVGLYSEGNVSLSVQDELENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFG HHCCCEEECCCEEEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCC SQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSLPIEAFSTNAVGYSGTESARK CCCCHHHHHEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCE ISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV EEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEE GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVS CCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHCCE LSKENIHCGVSYSTWGDSFFSDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNS EECCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCC RHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKKTQIASYDDQVKPFSGICGIL CEEEEECCCCCHHHHHHHHHEEEEEEECCCEEEECCCCCCCEECCCCCCCCCCCCCEEEE GIKIKF EEEEEC >Mature Secondary Structure MRKFIKVNSIKLVNVLYLSSVFFVSNAFAEITHKFSGAFSFEAGVPYYHFEPHSDNVSAY CCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCCHHHH RKNVGLYSEGNVSLSVQDELENISYGGKVVLHTTTKAKGAASLNGSRLFIKSKIGLMEFG HHCCCEEECCCEEEEEHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHCC SQHSIAKVMQISPKTCGAMGTWSRYAKFPENYVFAASSSLPIEAFSTNAVGYSGTESARK CCCCHHHHHEECCCCCCCCCCCHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCE ISYFTPEYHGLILGVSYIPDTSNSTGNVGDDTTTKAIVIKLPGCTNRYVQYRLVATDAWV EEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEEEE GGINYKHNFQSGSSIKLGAVIEYGNALPMKVYNNPECKSEHKIDDVINVKDILAYSLGVS CCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHCCHHHHHHHHHCCE LSKENIHCGVSYSTWGDSFFSDEIVTKPKSDSWSIGIAYVEVPIGVSLEWSYNTYGDRNS EECCCEEEEEEECCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCC RHAITFGSDYQLAEGLSAYFDLSYFVAKGSKVLLDNDPKKTQIASYDDQVKPFSGICGIL CEEEEECCCCCHHHHHHHHHEEEEEEECCCEEEECCCCCCCEECCCCCCCCCCCCCEEEE GIKIKF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]