| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is nuoN1
Identifier: 189184492
GI number: 189184492
Start: 1616605
End: 1618044
Strand: Reverse
Name: nuoN1
Synonym: OTT_1585
Alternate gene names: 189184492
Gene position: 1618044-1616605 (Counterclockwise)
Preceding gene: 189184493
Following gene: 189184491
Centisome position: 80.54
GC content: 28.33
Gene sequence:
>1440_bases ATGGAAATGTTATATGGTATTATGCCAGAAATTTCGCTTCTTTTATCAGCTTTGATTTTTCAACTAATTGGAGCATATAG TAACAATACGCTAACTCATGTCATAGCTAAAATGGCAATTGGTTTTGCCGCTATATTAATAGCTATTTTAGTATTTCATC CTAGCTGGTTTAATGGTATTTACTGGAATAATACATTTATTGTTAACCAATCTAAAATATACTTAAAAATTATTATTTTA ATTTTTTATATATTTCTTACTTTAATTTATTCTGGATATATCAAGGTTGCAAACTTAAAAGGCCATAGTGAATATATAGT ACTAATGCAGCTTGGAGCTTTAGGAGGATTAATATTGGTTTCAGCTAATGATTTTATGGTTATGTACCTTGGTATTGAGA TGCAAGGAATAATAGGATATATTTTAACGACTTTTAATTATAATAATTCTAGATCATCTGAAGCTGGTTTAAAATATTTT ATATTAGGAACAGTTTTCTCAGCTATTATGTTGTTTGGTATATCTTTAGTATATGGTACTACTCAAAGCATAAGGTATGA TATTGCTTTGCATGCATTGCAAAATCCAAGCTCTGATATGGCTGTGCTAGTTGCTGCTATATTAATGATACTTGTAGGAG TCTTATTTAAATTATCTATTGCGCCGTTTCATATGTGGACACCTGATATTTATGATGGAGCACCTTTAGTAGTAGTTGCG TTATTTTCTAGCTTGCCTAAAATTAGTGTATTAGCATTGCTTGGAAATTTATTATCTGAATTAAAGTTTGCTAGTGATGC ATTCTTTTATATAAAAACGATAATAATGGTACTGGCATGTCTATCATTAATTGTTGGTGCATTTGGCGCATTATTACAAC AATCAATTCAAAGGTTTATTGCCTATAGTGCAATATTAAATTTAGGATATGCTGTACTTGCTTTAGTTGCTAACAGCTCT AATGTTATTAGAGCAGAAATATCATATTTTTATATTATTATTTATGCTGCTAGTATGTTAGGATTTATTGCGATAATAAT AAACAATTTTACTAATCGTGCTAATTATTTAAAAATTAGTCATCTTAGTGGATTATCTAATGTAAAAAAATTATCGTCAA TATTAATAGCAATACAGATGTTCTCATTAGTAGGAATTCCACCTTTTGCAGGGTTTATTAGTAAGTATATTATCTTTACT AGTATTTTAAAATCTGGTATGTATGAATTAATAATTATGGGAATAGCAGCAGTTGTGATTGGATCATATTGTTATCTTAA TATTGTTAAAGTAATGTACTTTTTACCTGCTACAGTCAGGTTTCAGAATTCCAGTGTAAATTTTGAGCTAAGCTTAGTAA GTATAGCTTCAACTATAATTGTTATATCATTAATGATTATATGCATGCTTTTTGGTGAAGGTTTAAACGTTATTGTATAA
Upstream 100 bases:
>100_bases TATTAAACATTTTATTGATACCAGCTAAGAACTTAAGCAGTTTATTTATTATATAAATTGTAATTGCTGTGTACGTTTAA TTTTATTTGAAAGAGTTATT
Downstream 100 bases:
>100_bases TGCTTAGTCAAAATGAGATATGGATTATTTAAGTTTTAGGCTATTGATAGTATGCAAACAGAAGGGTTTAAAGCTATTAA ACCCTATGGCTTAGTAAAGC
Product: NADH dehydrogenase I chain N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MEMLYGIMPEISLLLSALIFQLIGAYSNNTLTHVIAKMAIGFAAILIAILVFHPSWFNGIYWNNTFIVNQSKIYLKIIIL IFYIFLTLIYSGYIKVANLKGHSEYIVLMQLGALGGLILVSANDFMVMYLGIEMQGIIGYILTTFNYNNSRSSEAGLKYF ILGTVFSAIMLFGISLVYGTTQSIRYDIALHALQNPSSDMAVLVAAILMILVGVLFKLSIAPFHMWTPDIYDGAPLVVVA LFSSLPKISVLALLGNLLSELKFASDAFFYIKTIIMVLACLSLIVGAFGALLQQSIQRFIAYSAILNLGYAVLALVANSS NVIRAEISYFYIIIYAASMLGFIAIIINNFTNRANYLKISHLSGLSNVKKLSSILIAIQMFSLVGIPPFAGFISKYIIFT SILKSGMYELIIMGIAAVVIGSYCYLNIVKVMYFLPATVRFQNSSVNFELSLVSIASTIIVISLMIICMLFGEGLNVIV
Sequences:
>Translated_479_residues MEMLYGIMPEISLLLSALIFQLIGAYSNNTLTHVIAKMAIGFAAILIAILVFHPSWFNGIYWNNTFIVNQSKIYLKIIIL IFYIFLTLIYSGYIKVANLKGHSEYIVLMQLGALGGLILVSANDFMVMYLGIEMQGIIGYILTTFNYNNSRSSEAGLKYF ILGTVFSAIMLFGISLVYGTTQSIRYDIALHALQNPSSDMAVLVAAILMILVGVLFKLSIAPFHMWTPDIYDGAPLVVVA LFSSLPKISVLALLGNLLSELKFASDAFFYIKTIIMVLACLSLIVGAFGALLQQSIQRFIAYSAILNLGYAVLALVANSS NVIRAEISYFYIIIYAASMLGFIAIIINNFTNRANYLKISHLSGLSNVKKLSSILIAIQMFSLVGIPPFAGFISKYIIFT SILKSGMYELIIMGIAAVVIGSYCYLNIVKVMYFLPATVRFQNSSVNFELSLVSIASTIIVISLMIICMLFGEGLNVIV >Mature_479_residues MEMLYGIMPEISLLLSALIFQLIGAYSNNTLTHVIAKMAIGFAAILIAILVFHPSWFNGIYWNNTFIVNQSKIYLKIIIL IFYIFLTLIYSGYIKVANLKGHSEYIVLMQLGALGGLILVSANDFMVMYLGIEMQGIIGYILTTFNYNNSRSSEAGLKYF ILGTVFSAIMLFGISLVYGTTQSIRYDIALHALQNPSSDMAVLVAAILMILVGVLFKLSIAPFHMWTPDIYDGAPLVVVA LFSSLPKISVLALLGNLLSELKFASDAFFYIKTIIMVLACLSLIVGAFGALLQQSIQRFIAYSAILNLGYAVLALVANSS NVIRAEISYFYIIIYAASMLGFIAIIINNFTNRANYLKISHLSGLSNVKKLSSILIAIQMFSLVGIPPFAGFISKYIIFT SILKSGMYELIIMGIAAVVIGSYCYLNIVKVMYFLPATVRFQNSSVNFELSLVSIASTIIVISLMIICMLFGEGLNVIV
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family
Homologues:
Organism=Homo sapiens, GI251831108, Length=209, Percent_Identity=25.8373205741627, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI145693160, Length=372, Percent_Identity=28.494623655914, Blast_Score=145, Evalue=8e-36, Organism=Escherichia coli, GI1788831, Length=334, Percent_Identity=27.5449101796407, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788614, Length=321, Percent_Identity=23.6760124610592, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUON_ORITI (B3CUJ6)
Other databases:
- EMBL: AP008981 - RefSeq: YP_001938277.1 - GeneID: 6337894 - GenomeReviews: AP008981_GR - KEGG: ott:OTT_1585 - HOGENOM: HBG747830 - OMA: SIGHIGF - ProtClustDB: CLSK2325918 - GO: GO:0006810 - HAMAP: MF_00445 - InterPro: IPR010096 - InterPro: IPR001750 - TIGRFAMs: TIGR01770
Pfam domain/function: PF00361 Oxidored_q1
EC number: =1.6.99.5
Molecular weight: Translated: 52680; Mature: 52680
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x20f7a1b0)-; HASH(0x245e4d9c)-; HASH(0x2463a6a4)-; HASH(0x22f3dd44)-; HASH(0x2465aab8)-; HASH(0x24651e1c)-; HASH(0x23e4e748)-; HASH(0x246586e0)-; HASH(0x246586c8)-; HASH(0x24374d04)-; HASH(0x20d32e1c)-; HASH(0x245e4f58)-; HASH(0x24651c78)-; HASH(0x245cd218)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMLYGIMPEISLLLSALIFQLIGAYSNNTLTHVIAKMAIGFAAILIAILVFHPSWFNGI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE YWNNTFIVNQSKIYLKIIILIFYIFLTLIYSGYIKVANLKGHSEYIVLMQLGALGGLILV EECCEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCEEEE SANDFMVMYLGIEMQGIIGYILTTFNYNNSRSSEAGLKYFILGTVFSAIMLFGISLVYGT ECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC TQSIRYDIALHALQNPSSDMAVLVAAILMILVGVLFKLSIAPFHMWTPDIYDGAPLVVVA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHH LFSSLPKISVLALLGNLLSELKFASDAFFYIKTIIMVLACLSLIVGAFGALLQQSIQRFI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYSAILNLGYAVLALVANSSNVIRAEISYFYIIIYAASMLGFIAIIINNFTNRANYLKIS HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE HLSGLSNVKKLSSILIAIQMFSLVGIPPFAGFISKYIIFTSILKSGMYELIIMGIAAVVI HHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSYCYLNIVKVMYFLPATVRFQNSSVNFELSLVSIASTIIVISLMIICMLFGEGLNVIV HHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCH >Mature Secondary Structure MEMLYGIMPEISLLLSALIFQLIGAYSNNTLTHVIAKMAIGFAAILIAILVFHPSWFNGI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE YWNNTFIVNQSKIYLKIIILIFYIFLTLIYSGYIKVANLKGHSEYIVLMQLGALGGLILV EECCEEEEECCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCEEEE SANDFMVMYLGIEMQGIIGYILTTFNYNNSRSSEAGLKYFILGTVFSAIMLFGISLVYGT ECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC TQSIRYDIALHALQNPSSDMAVLVAAILMILVGVLFKLSIAPFHMWTPDIYDGAPLVVVA CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHHH LFSSLPKISVLALLGNLLSELKFASDAFFYIKTIIMVLACLSLIVGAFGALLQQSIQRFI HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYSAILNLGYAVLALVANSSNVIRAEISYFYIIIYAASMLGFIAIIINNFTNRANYLKIS HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE HLSGLSNVKKLSSILIAIQMFSLVGIPPFAGFISKYIIFTSILKSGMYELIIMGIAAVVI HHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSYCYLNIVKVMYFLPATVRFQNSSVNFELSLVSIASTIIVISLMIICMLFGEGLNVIV HHHHHHHHHHHHHHCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA