| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184414
Identifier: 189184414
GI number: 189184414
Start: 1533355
End: 1533837
Strand: Reverse
Name: 189184414
Synonym: OTT_1507
Alternate gene names: NA
Gene position: 1533837-1533355 (Counterclockwise)
Preceding gene: 189184415
Following gene: 189184413
Centisome position: 76.35
GC content: 27.12
Gene sequence:
>483_bases ATGAAAAAATGTATTATAACAGTATACTATCTAATAGACAATTTTTGTAAGATATATCAAGAGTGGGAAAGAAAGAGATT AATACCAAGTAATGGTCAAAGGAACAGAGATGGAAAGTTATCTTTAGCTGAGTTATTAACAATAGTGATATATTTTTATT TATCTCCATGCAAGGATTTTAAAAATTATTATCTATATTACTTGTGTCATAAGTATAAAGGATACTTTTGTTTGCCAAGC TATAGTAGGATAATACAACTATTACCTAGAATGTTGCTACCATTAGCAGTATTAATGCATTATCTGAAAGGAGATGAGAC TGGTATATATTACATCGATTCTACAAAGTTAGCAATTTGTCATAATAAACGTACTTACAGCAATAGAGTTTTTAACAAAA TTTCTAAAATTGGTAAAAGTAGTTATGGTTTGTTCTTACTCTTTAAGCTTCATCTTATAATCAATAAGATGTACTATAGG TAA
Upstream 100 bases:
>100_bases TTAGGATAAGCGGAAAATATGAAAGGTAGAGAATAAAAGGTATACAAAGAGAGAATGTTGAGTTATAAAAAAAATTTAAA TAAACAAGGAATAACCCAAC
Downstream 100 bases:
>100_bases AGGTGCAAAGGCAGATCAAGTATAAGGAATAAGAAAAGTTGATTTTTGTTAACTTCTACACTTTATAGAACCTACTATTA ACTTATGTTAACTTTTATTA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS4 Family; Transposase IS; IS4 Family Transposase; Protease
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLCHKYKGYFCLPS YSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAICHNKRTYSNRVFNKISKIGKSSYGLFLLFKLHLIINKMYYR
Sequences:
>Translated_160_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLCHKYKGYFCLPS YSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAICHNKRTYSNRVFNKISKIGKSSYGLFLLFKLHLIINKMYYR >Mature_160_residues MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLCHKYKGYFCLPS YSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAICHNKRTYSNRVFNKISKIGKSSYGLFLLFKLHLIINKMYYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19285; Mature: 19285
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH KNYYLYYLCHKYKGYFCLPSYSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAIC HHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEE HNKRTYSNRVFNKISKIGKSSYGLFLLFKLHLIINKMYYR ECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKCIITVYYLIDNFCKIYQEWERKRLIPSNGQRNRDGKLSLAELLTIVIYFYLSPCKDF CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH KNYYLYYLCHKYKGYFCLPSYSRIIQLLPRMLLPLAVLMHYLKGDETGIYYIDSTKLAIC HHHHHHHEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEE HNKRTYSNRVFNKISKIGKSSYGLFLLFKLHLIINKMYYR ECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA