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The map label for this gene is intB [C]

Identifier: 189184413

GI number: 189184413

Start: 1532198

End: 1532773

Strand: Reverse

Name: intB [C]

Synonym: OTT_1506

Alternate gene names: 189184413

Gene position: 1532773-1532198 (Counterclockwise)

Preceding gene: 189184414

Following gene: 189184412

Centisome position: 76.3

GC content: 31.25

Gene sequence:

>576_bases
ATGACGATAGGTGTATTTCCAGATTTATCTATTAAAGAAGCTAGAAAAATAGCAAGAGAATTAAAGAGATTAATGGCGAA
AGGAATAGATCCAAGAGAAGTAAAACGTCAACAACAGATGGAAGAAAATGAGAAATGTATAAAAGAAAGAGAAAGAAAAG
CTAACGATATTACATTCAAAGAGCTGTGTTATAAGTATATTGAAGAGTATGCCAAAATATATATTATACACTGGCAGAAA
GATGCTGCAAGAATATATAATTATGGGAAACAGTTATTTTTAAAAAAGATAAACGAGGTTAAAAGGAATGATATTCAACA
AATATTCAATGATATCAGCAAAAAGGGAAAATATGCCACAGCAAATCTAATACTACTAACCTTACGCACTATATTTAATA
AGGCAAAAAAATGGGGATTAATAGAAAACAATCCTACTCTAGGAATAGAGCAGCATAAACTGCAAGCAAGAGAGAGACGT
CTAAGTTACGATGAAATGGGTAGATTTTTACACGTATTATGTGGAGAAGCGACTCCATTGATAAGAGATTTTGCATTACT
AGCGTTATATACTTGA

Upstream 100 bases:

>100_bases
ATCAAGGATAAAATTGAACCAGGACTTCAACTAAGAATATCACCGACAGGAAGAAAAACATGGTCTTTTGAAAAAAAAAT
TTAGAAAAGAAGGGATAAAA

Downstream 100 bases:

>100_bases
GCTAGAAAAAGTAATGTGTTGGAGATGGAATGGGACAATATAGATTTTGAAAGAAAAATATGGCATATACCAAAAACTAA
GAACGGAAAGGCGCAAAATA

Product: putative integrase

Products: NA

Alternate protein names: Phage-Related Integrase; Phage Integrase Family Protein; Integrase Family Protein

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTIGVFPDLSIKEARKIARELKRLMAKGIDPREVKRQQQMEENEKCIKERERKANDITFKELCYKYIEEYAKIYIIHWQK
DAARIYNYGKQLFLKKINEVKRNDIQQIFNDISKKGKYATANLILLTLRTIFNKAKKWGLIENNPTLGIEQHKLQARERR
LSYDEMGRFLHVLCGEATPLIRDFALLALYT

Sequences:

>Translated_191_residues
MTIGVFPDLSIKEARKIARELKRLMAKGIDPREVKRQQQMEENEKCIKERERKANDITFKELCYKYIEEYAKIYIIHWQK
DAARIYNYGKQLFLKKINEVKRNDIQQIFNDISKKGKYATANLILLTLRTIFNKAKKWGLIENNPTLGIEQHKLQARERR
LSYDEMGRFLHVLCGEATPLIRDFALLALYT
>Mature_190_residues
TIGVFPDLSIKEARKIARELKRLMAKGIDPREVKRQQQMEENEKCIKERERKANDITFKELCYKYIEEYAKIYIIHWQKD
AARIYNYGKQLFLKKINEVKRNDIQQIFNDISKKGKYATANLILLTLRTIFNKAKKWGLIENNPTLGIEQHKLQARERRL
SYDEMGRFLHVLCGEATPLIRDFALLALYT

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22669; Mature: 22538

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIGVFPDLSIKEARKIARELKRLMAKGIDPREVKRQQQMEENEKCIKERERKANDITFK
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ELCYKYIEEYAKIYIIHWQKDAARIYNYGKQLFLKKINEVKRNDIQQIFNDISKKGKYAT
HHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ANLILLTLRTIFNKAKKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLHVLCGEATPL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
IRDFALLALYT
HHHHHHHHHCC
>Mature Secondary Structure 
TIGVFPDLSIKEARKIARELKRLMAKGIDPREVKRQQQMEENEKCIKERERKANDITFK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ELCYKYIEEYAKIYIIHWQKDAARIYNYGKQLFLKKINEVKRNDIQQIFNDISKKGKYAT
HHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ANLILLTLRTIFNKAKKWGLIENNPTLGIEQHKLQARERRLSYDEMGRFLHVLCGEATPL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHH
IRDFALLALYT
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA