Click here to switch to the map view.

The map label for this gene is traN [H]

Identifier: 189184399

GI number: 189184399

Start: 1522322

End: 1522957

Strand: Reverse

Name: traN [H]

Synonym: OTT_1492

Alternate gene names: 189184399

Gene position: 1522957-1522322 (Counterclockwise)

Preceding gene: 189184400

Following gene: 189184398

Centisome position: 75.81

GC content: 34.91

Gene sequence:

>636_bases
ATGCTACACTCATCGTTGCGTAATAACTCGATTTTTTGTTTAGGAGGTAATTGCAACACTCCGACTATTATACCAAACAG
GGATATAGCTAAAGTAGCTCATCTAGCAATGCTAAATCAGATGAGCAAAGACATTAAAACAAATCCCGTTTCTGTATTTT
CAGGTAAACATCGAAAATGCAAAAAAGACGTATTTAGTTTTTTGAATTGCTGTTCTTCAATGACTGGCTGGGGGCGTGAT
ATAGGCTTATCGCAATGCAAATCTAAGGAACAAGAATTAGCTCTATATAGAAAAAAAGGTTACTGCTACTATATTGGAAC
CTACTGTTCTTCAAGAATTCCGATATTAGGTATTTGCTTAACTAGAAAGTCTACTTATTGCTGCTTTCAGTCGAAACTTG
CTAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAATTGAACTTTGGAACACCTGAATGTCCAAAGTGTAGAGGCCTT
ACTGTTGAAGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGACGAACTATTTGGTGATATACTCACTAAGGCTCA
AAACAGCATGAACAAAGACATTATTGCAGGAATCAAAGATAAAGTTCATCGTATGCAACAAAGTCAGTCTAAATGA

Upstream 100 bases:

>100_bases
TCAAAATTGCGAATAAAAAAACAGCACTTGCCAAAAATCTGTAGCAAATATTTGTTTACTCTGACAGCACGATTATAGCT
GTTCAACTGAGAAGCAAGCA

Downstream 100 bases:

>100_bases
GCAGATTACTAATGGTTATGATATTAATTAGTCAATTATCTACAGTTGATGCTTCGCCCACAGGATTTCTATGGTACAAT
GATAAACATGATCATGAGCT

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRD
IGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLTRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGL
TVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK

Sequences:

>Translated_211_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRD
IGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLTRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGL
TVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
>Mature_211_residues
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRD
IGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLTRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGL
TVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQSQSK

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 23943; Mature: 23943

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC
CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHH
KKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICL
HHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECHHCCCCCEEEEEE
TRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDELFG
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHH
DILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKC
CCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHH
KKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICL
HHHHHHHHHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECHHCCCCCEEEEEE
TRKSTYCCFQSKLARIFQEEARKQLKLNFGTPECPKCRGLTVEELQKVDFTKINMDELFG
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHH
DILTKAQNSMNKDIIAGIKDKVHRMQQSQSK
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]