Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

Click here to switch to the map view.

The map label for this gene is 189183597

Identifier: 189183597

GI number: 189183597

Start: 717506

End: 720010

Strand: Direct

Name: 189183597

Synonym: OTT_0690

Alternate gene names: NA

Gene position: 717506-720010 (Clockwise)

Preceding gene: 189183596

Following gene: 189183600

Centisome position: 35.71

GC content: 29.82

Gene sequence:

>2505_bases
ATGGGCAATAAATCAGAGTTAATTGAGATTTTTTTGAATGACTATAACAACTTTGAAAAGTCGTTAACTAAAACATTTGA
TAAAATTCCTATAGCAAGAAATACTAATAACAAGGATTTTTGGATGTTCCTTTTTATTGGTTCTGCATTAACTATTCTAA
ATAGCGAGTTAAGACAAAATGTAAAATCTATTTGCTATAGCATTACTAATAACAACATCTTGAGATTAGTATTTAACTTC
AACAATAAAATTATATTACGATCTATATCTATTGGATTTAATGATGAAGTTTATGGAGAACATCAATTTTCAAGGAAAGA
TCTTGATCAAATAAAAGCTCTTTTTTCATATGACAAAATCATAAGCCTAAAAAGTACTTGCTCAAAACATATTCATATCA
AAATTATTCGTGGCAAAACTATCAAAAAACCCAAAATAAGTGTTATATGCACAGACAATATTGAAGAAACAAGAAAAGAT
AATGCTAGCAGCAAGTTTATTAATGTTAATCCTTTAGATATGAAAGGAAAAACATTAGATATGTGTTTAAAGCTGATTTC
TCAGCCAACAGATAGTAATAATGATGATGATAATGACGATGAACAAGATTATACAGAAAATGTAGAGCAGCTATTTAATT
GCTTTAAAGATTTATATAAGCAAGGCCAAGGGCTCTTTGGGACTTCAGAGTCACGTTATCATGGGTTTGTTTATGGAGCA
TTAGTATTAAACTTCAAACAAAAATATTCAATAGATGTATATGTTGAACAAAGTGCAGGCAGAGGATATCTAGATTTGTA
TTTGCTATGTAAACATTATAATCAGGATCAGATAGCTAATGCTGATGCTAATGCTGTCAAAATAATAGCTGAATTTAAAA
ATGGGAATAATAAATACCCTTCTGTTTCAGATGCAATAAAACAGGTAGAAGATAGGTGTTATACCCAACTTATTGGTAGA
ACTCAATCGAATAAGACTATAATAGTAGGAGCTGATTTTGGAGATATAACTAAGCAAGTACAGGCAAAATTTATGCTGCT
TGATAAATTGCCTGAGCGAGATTTTATAACTTTCATAGCTGATTCAAAGACAAAACTGTCTAAAGCTAATATAAAAGAAG
AAATAAGGTGGATATTTAAATCAACACGTGCAGAGGAATCATTAGCTAAAATATTATTAGGAGAGTTATTATCAAGCAAA
GTACAAAAAAAGTCTGCAGTTTTTCTTAATAAAATTGATAATGATGAAACCAAGGCTAGTATATTTATTCTTAAGCAATT
TAATAACAATATAATATTATCTACTATTGAGAAAGATGACAAGCCGCTACAGAAATATTGCAGACTAGGCAGTACTAGAT
TACAGAGCAAGCACAACAAAGAAGTCAAAGTAACAGATGAGGTAGAGTATGCAGTGCAACATATTCAAAAACAGTATAAA
ATTAATTCTGGCACAAAAATTACCATAATAGTTAATAGAAAAGGACAAAACTACGAGACTTACTTAGAAAGTGTAGATAT
AACAAATTTAAACTCTAATCCTTCTGGTACTGATATAGACTATAATATAAAAGACTATATAACAAAACCATATAATATTA
AGCACAATATTGATGTATGCAAGCTAATACTAGAATTATCACAAGATATACAAGATGATAAGTTGGTAGAGCTGGCTAAG
CTTAAAGATGAGCTCTGCGAATTTCAAGCATTTATCACAGAGGAACGCGACTTTCAGGCTATATTACATGGATTATTCTC
ATTCAAGAAGTTTGAAGAAAATACAACTTTAAGGGCAATATCAGAAGTAACATTTGGCACAGGCAAAGCGGATTTAGTAT
TAGCATCTAACCATAGTATACTTTATTTTGAGTTAGCTTTATTAAAGGAACATAACGTTGATACTTTGCTAAATAAAAAA
AAAAAGCAACTTGATAAATACCTGGTAAATGCTAAAGTTATTACTAATGATAAGAATGCTAACGGAGTAGTACTAATTTT
TGATAGCAAAACAGGCAAGTTATATAACAGGTATCATACTGCGCCAGTTGAGCATTCTTCAGATGAAGGAGGGCAAACAC
CTATATATAATCAAATAGAAACGCTAGAACCGCGGCTTTTGTCACCAATAGATCAAAATAGCCCTACTAAAGCTAAAAAA
TCAAAAAACTCTCATAATGAAGAAGATTCTAATATAAATATAATAAAAAAAAGCAAAATGAAGTCAGTTGGCAATTTTAG
CAGCATTAATGATTCTAATAGACAAAAAAAAGTATCTCAAAACTACAACATAAATAACTTTGATGACATTGAAGGAAACC
GAGATAAAATTTATGTAAATAGTGAAAACTCTATAGAAGACAAAAAAAATACTGAAGTCGATAAAAATGCTCAACTGCTT
GCATTTGTACAAGATGGGTGGCATGGACAAGAAGATTTAAATTACAACAATCAATCAGCTTCTACTCTTAGTAAGACAAT
AGGGTTAGATAATATACCTGAGTAA

Upstream 100 bases:

>100_bases
ATTACTTCTAATGATCAGTCAGCAGTGAATGCTATAGGAGAATTAGCTCTTAACATTTAGATTTAGTGTAATAGTAATAT
AAAATTAAAATATATAAAAA

Downstream 100 bases:

>100_bases
GCCTTTATAGTCATTTACAATGACTATAAACATCAATTTAGGATAAAGTATAGTAATAGAAAGAATAGGAGATAAGATTA
GGATTAAGTTGTAGATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 834; Mature: 833

Protein sequence:

>834_residues
MGNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQNVKSICYSITNNNILRLVFNF
NNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKIISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKD
NASSKFINVNPLDMKGKTLDMCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA
LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYPSVSDAIKQVEDRCYTQLIGR
TQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIADSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSK
VQKKSAVFLNKIDNDETKASIFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK
INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVCKLILELSQDIQDDKLVELAK
LKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAISEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKK
KKQLDKYLVNAKVITNDKNANGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK
SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVNSENSIEDKKNTEVDKNAQLL
AFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE

Sequences:

>Translated_834_residues
MGNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQNVKSICYSITNNNILRLVFNF
NNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKIISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKD
NASSKFINVNPLDMKGKTLDMCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA
LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYPSVSDAIKQVEDRCYTQLIGR
TQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIADSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSK
VQKKSAVFLNKIDNDETKASIFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK
INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVCKLILELSQDIQDDKLVELAK
LKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAISEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKK
KKQLDKYLVNAKVITNDKNANGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK
SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVNSENSIEDKKNTEVDKNAQLL
AFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE
>Mature_833_residues
GNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQNVKSICYSITNNNILRLVFNFN
NKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKIISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKDN
ASSKFINVNPLDMKGKTLDMCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGAL
VLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYPSVSDAIKQVEDRCYTQLIGRT
QSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIADSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSKV
QKKSAVFLNKIDNDETKASIFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYKI
NSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVCKLILELSQDIQDDKLVELAKL
KDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAISEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKKK
KQLDKYLVNAKVITNDKNANGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKKS
KNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVNSENSIEDKKNTEVDKNAQLLA
FVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 95422; Mature: 95291

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHHH
VKSICYSITNNNILRLVFNFNNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKI
HHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKDNASSKFINVNPLDMKGKTLD
HHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCCCEEECCCCCCCCCHHH
MCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYP
HHEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCC
SVSDAIKQVEDRCYTQLIGRTQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIA
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSKVQKKSAVFLNKIDNDETKAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
IFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK
EEEEEECCCCEEEEECCCCCHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHC
INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVC
CCCCCEEEEEEECCCCCHHHHHHHCCEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHH
KLILELSQDIQDDKLVELAKLKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
SEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKKKKQLDKYLVNAKVITNDKNA
HHHHCCCCCEEEEEECCCCEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC
NGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK
CCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCHHHH
SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVN
CCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC
SENSIEDKKNTEVDKNAQLLAFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHHH
VKSICYSITNNNILRLVFNFNNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKI
HHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKDNASSKFINVNPLDMKGKTLD
HHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCCCEEECCCCCCCCCHHH
MCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE
LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYP
HHEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCC
SVSDAIKQVEDRCYTQLIGRTQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIA
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSKVQKKSAVFLNKIDNDETKAS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
IFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK
EEEEEECCCCEEEEECCCCCHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHC
INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVC
CCCCCEEEEEEECCCCCHHHHHHHCCEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHH
KLILELSQDIQDDKLVELAKLKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH
SEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKKKKQLDKYLVNAKVITNDKNA
HHHHCCCCCEEEEEECCCCEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC
NGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK
CCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCHHHH
SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVN
CCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC
SENSIEDKKNTEVDKNAQLLAFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA