| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183597
Identifier: 189183597
GI number: 189183597
Start: 717506
End: 720010
Strand: Direct
Name: 189183597
Synonym: OTT_0690
Alternate gene names: NA
Gene position: 717506-720010 (Clockwise)
Preceding gene: 189183596
Following gene: 189183600
Centisome position: 35.71
GC content: 29.82
Gene sequence:
>2505_bases ATGGGCAATAAATCAGAGTTAATTGAGATTTTTTTGAATGACTATAACAACTTTGAAAAGTCGTTAACTAAAACATTTGA TAAAATTCCTATAGCAAGAAATACTAATAACAAGGATTTTTGGATGTTCCTTTTTATTGGTTCTGCATTAACTATTCTAA ATAGCGAGTTAAGACAAAATGTAAAATCTATTTGCTATAGCATTACTAATAACAACATCTTGAGATTAGTATTTAACTTC AACAATAAAATTATATTACGATCTATATCTATTGGATTTAATGATGAAGTTTATGGAGAACATCAATTTTCAAGGAAAGA TCTTGATCAAATAAAAGCTCTTTTTTCATATGACAAAATCATAAGCCTAAAAAGTACTTGCTCAAAACATATTCATATCA AAATTATTCGTGGCAAAACTATCAAAAAACCCAAAATAAGTGTTATATGCACAGACAATATTGAAGAAACAAGAAAAGAT AATGCTAGCAGCAAGTTTATTAATGTTAATCCTTTAGATATGAAAGGAAAAACATTAGATATGTGTTTAAAGCTGATTTC TCAGCCAACAGATAGTAATAATGATGATGATAATGACGATGAACAAGATTATACAGAAAATGTAGAGCAGCTATTTAATT GCTTTAAAGATTTATATAAGCAAGGCCAAGGGCTCTTTGGGACTTCAGAGTCACGTTATCATGGGTTTGTTTATGGAGCA TTAGTATTAAACTTCAAACAAAAATATTCAATAGATGTATATGTTGAACAAAGTGCAGGCAGAGGATATCTAGATTTGTA TTTGCTATGTAAACATTATAATCAGGATCAGATAGCTAATGCTGATGCTAATGCTGTCAAAATAATAGCTGAATTTAAAA ATGGGAATAATAAATACCCTTCTGTTTCAGATGCAATAAAACAGGTAGAAGATAGGTGTTATACCCAACTTATTGGTAGA ACTCAATCGAATAAGACTATAATAGTAGGAGCTGATTTTGGAGATATAACTAAGCAAGTACAGGCAAAATTTATGCTGCT TGATAAATTGCCTGAGCGAGATTTTATAACTTTCATAGCTGATTCAAAGACAAAACTGTCTAAAGCTAATATAAAAGAAG AAATAAGGTGGATATTTAAATCAACACGTGCAGAGGAATCATTAGCTAAAATATTATTAGGAGAGTTATTATCAAGCAAA GTACAAAAAAAGTCTGCAGTTTTTCTTAATAAAATTGATAATGATGAAACCAAGGCTAGTATATTTATTCTTAAGCAATT TAATAACAATATAATATTATCTACTATTGAGAAAGATGACAAGCCGCTACAGAAATATTGCAGACTAGGCAGTACTAGAT TACAGAGCAAGCACAACAAAGAAGTCAAAGTAACAGATGAGGTAGAGTATGCAGTGCAACATATTCAAAAACAGTATAAA ATTAATTCTGGCACAAAAATTACCATAATAGTTAATAGAAAAGGACAAAACTACGAGACTTACTTAGAAAGTGTAGATAT AACAAATTTAAACTCTAATCCTTCTGGTACTGATATAGACTATAATATAAAAGACTATATAACAAAACCATATAATATTA AGCACAATATTGATGTATGCAAGCTAATACTAGAATTATCACAAGATATACAAGATGATAAGTTGGTAGAGCTGGCTAAG CTTAAAGATGAGCTCTGCGAATTTCAAGCATTTATCACAGAGGAACGCGACTTTCAGGCTATATTACATGGATTATTCTC ATTCAAGAAGTTTGAAGAAAATACAACTTTAAGGGCAATATCAGAAGTAACATTTGGCACAGGCAAAGCGGATTTAGTAT TAGCATCTAACCATAGTATACTTTATTTTGAGTTAGCTTTATTAAAGGAACATAACGTTGATACTTTGCTAAATAAAAAA AAAAAGCAACTTGATAAATACCTGGTAAATGCTAAAGTTATTACTAATGATAAGAATGCTAACGGAGTAGTACTAATTTT TGATAGCAAAACAGGCAAGTTATATAACAGGTATCATACTGCGCCAGTTGAGCATTCTTCAGATGAAGGAGGGCAAACAC CTATATATAATCAAATAGAAACGCTAGAACCGCGGCTTTTGTCACCAATAGATCAAAATAGCCCTACTAAAGCTAAAAAA TCAAAAAACTCTCATAATGAAGAAGATTCTAATATAAATATAATAAAAAAAAGCAAAATGAAGTCAGTTGGCAATTTTAG CAGCATTAATGATTCTAATAGACAAAAAAAAGTATCTCAAAACTACAACATAAATAACTTTGATGACATTGAAGGAAACC GAGATAAAATTTATGTAAATAGTGAAAACTCTATAGAAGACAAAAAAAATACTGAAGTCGATAAAAATGCTCAACTGCTT GCATTTGTACAAGATGGGTGGCATGGACAAGAAGATTTAAATTACAACAATCAATCAGCTTCTACTCTTAGTAAGACAAT AGGGTTAGATAATATACCTGAGTAA
Upstream 100 bases:
>100_bases ATTACTTCTAATGATCAGTCAGCAGTGAATGCTATAGGAGAATTAGCTCTTAACATTTAGATTTAGTGTAATAGTAATAT AAAATTAAAATATATAAAAA
Downstream 100 bases:
>100_bases GCCTTTATAGTCATTTACAATGACTATAAACATCAATTTAGGATAAAGTATAGTAATAGAAAGAATAGGAGATAAGATTA GGATTAAGTTGTAGATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 834; Mature: 833
Protein sequence:
>834_residues MGNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQNVKSICYSITNNNILRLVFNF NNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKIISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKD NASSKFINVNPLDMKGKTLDMCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYPSVSDAIKQVEDRCYTQLIGR TQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIADSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSK VQKKSAVFLNKIDNDETKASIFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVCKLILELSQDIQDDKLVELAK LKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAISEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKK KKQLDKYLVNAKVITNDKNANGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVNSENSIEDKKNTEVDKNAQLL AFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE
Sequences:
>Translated_834_residues MGNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQNVKSICYSITNNNILRLVFNF NNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKIISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKD NASSKFINVNPLDMKGKTLDMCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYPSVSDAIKQVEDRCYTQLIGR TQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIADSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSK VQKKSAVFLNKIDNDETKASIFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVCKLILELSQDIQDDKLVELAK LKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAISEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKK KKQLDKYLVNAKVITNDKNANGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVNSENSIEDKKNTEVDKNAQLL AFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE >Mature_833_residues GNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQNVKSICYSITNNNILRLVFNFN NKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKIISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKDN ASSKFINVNPLDMKGKTLDMCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGAL VLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYPSVSDAIKQVEDRCYTQLIGRT QSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIADSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSKV QKKSAVFLNKIDNDETKASIFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYKI NSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVCKLILELSQDIQDDKLVELAKL KDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAISEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKKK KQLDKYLVNAKVITNDKNANGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKKS KNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVNSENSIEDKKNTEVDKNAQLLA FVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 95422; Mature: 95291
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHHH VKSICYSITNNNILRLVFNFNNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKI HHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKDNASSKFINVNPLDMKGKTLD HHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCCCEEECCCCCCCCCHHH MCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYP HHEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCC SVSDAIKQVEDRCYTQLIGRTQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIA CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEE DSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSKVQKKSAVFLNKIDNDETKAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE IFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK EEEEEECCCCEEEEECCCCCHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHC INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVC CCCCCEEEEEEECCCCCHHHHHHHCCEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHH KLILELSQDIQDDKLVELAKLKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH SEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKKKKQLDKYLVNAKVITNDKNA HHHHCCCCCEEEEEECCCCEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC NGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK CCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCHHHH SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVN CCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC SENSIEDKKNTEVDKNAQLLAFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure GNKSELIEIFLNDYNNFEKSLTKTFDKIPIARNTNNKDFWMFLFIGSALTILNSELRQN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEHHHHHHHHHHHHHHH VKSICYSITNNNILRLVFNFNNKIILRSISIGFNDEVYGEHQFSRKDLDQIKALFSYDKI HHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ISLKSTCSKHIHIKIIRGKTIKKPKISVICTDNIEETRKDNASSKFINVNPLDMKGKTLD HHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCHHHHHCCCCCCCEEECCCCCCCCCHHH MCLKLISQPTDSNNDDDNDDEQDYTENVEQLFNCFKDLYKQGQGLFGTSESRYHGFVYGA HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEE LVLNFKQKYSIDVYVEQSAGRGYLDLYLLCKHYNQDQIANADANAVKIIAEFKNGNNKYP HHEEHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCC SVSDAIKQVEDRCYTQLIGRTQSNKTIIVGADFGDITKQVQAKFMLLDKLPERDFITFIA CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEE DSKTKLSKANIKEEIRWIFKSTRAEESLAKILLGELLSSKVQKKSAVFLNKIDNDETKAS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE IFILKQFNNNIILSTIEKDDKPLQKYCRLGSTRLQSKHNKEVKVTDEVEYAVQHIQKQYK EEEEEECCCCEEEEECCCCCHHHHHHHHCCCHHHHHCCCCCEEEEHHHHHHHHHHHHHHC INSGTKITIIVNRKGQNYETYLESVDITNLNSNPSGTDIDYNIKDYITKPYNIKHNIDVC CCCCCEEEEEEECCCCCHHHHHHHCCEECCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHH KLILELSQDIQDDKLVELAKLKDELCEFQAFITEERDFQAILHGLFSFKKFEENTTLRAI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHH SEVTFGTGKADLVLASNHSILYFELALLKEHNVDTLLNKKKKQLDKYLVNAKVITNDKNA HHHHCCCCCEEEEEECCCCEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHCCEEEECCCCC NGVVLIFDSKTGKLYNRYHTAPVEHSSDEGGQTPIYNQIETLEPRLLSPIDQNSPTKAKK CCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCHHHH SKNSHNEEDSNINIIKKSKMKSVGNFSSINDSNRQKKVSQNYNINNFDDIEGNRDKIYVN CCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEC SENSIEDKKNTEVDKNAQLLAFVQDGWHGQEDLNYNNQSASTLSKTIGLDNIPE CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA