| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183469
Identifier: 189183469
GI number: 189183469
Start: 576004
End: 576777
Strand: Direct
Name: 189183469
Synonym: OTT_0562
Alternate gene names: NA
Gene position: 576004-576777 (Clockwise)
Preceding gene: 189183468
Following gene: 189183472
Centisome position: 28.67
GC content: 30.49
Gene sequence:
>774_bases ATGGTAGATTTTATCTTTCAAAACAAATGTCAAATTGATGGGATGGATCCATTTAAATGGGCTTTAGACAATAATTATTG CATTAATGGTAAAAATCCAATTGAATACGCTGTTCATAAGAATTTTTTAATTGATAAAATGAACCCAATAATATGGGCTC AACAAAATAATATCACTAAAATACACGGCATTGATTTAGTATTATCAATAGTAAGGTCTGGATACGAAATAGAAGGAAAA GATGCTGTACTTTGGTGTATAGATAATAAAGTAAAAATTAATGGTCAAGAATCATCAGAGTTCGCTTTAGCTAATGGTTA TATTATGGTAGATAAATCATATGTAAAAATAGAGAATGATGTTATAAAGCATGCATTAAAACATGGCTATAAAATTAAAG GTCAAGATATTAGTGAGCATATTGATTTCGAACGAGATACAGATATTATTTATGATTTACAAAAGAATGGTTTTAAGATA TCAGGGAAATCTCCTGTTGAGTTTTGTATAGCTAAAGGAATGCATATTTGTAGGACAGATCCTGTAGACTTTGCGGTACA GAATAATTATCAAATTGAAGGGAAGAATCCGTTAGCATGGGCTATAAACAATAATTATCAAATAGCAACAATTTTTGGAC ACATATCTCCAATGGAATATGCAGTACGAAACAAAGTTCAAATTCCACTTGAGCAGTTAGGATGCGTACCTGATAATGCT CAACTCAAGACAGGTATTCAGGAAAAGCATTTGAAAACTTATCGTACAAAGTAA
Upstream 100 bases:
>100_bases AGATCTGGGGCTTATTTTAAAAGCAGATATATCAAAGTTAGAAAAAGATAGTGGTTGGCTATTTAATCAGCTTCAGAGCT TTGATCGGAAAAAATACAGT
Downstream 100 bases:
>100_bases TATAGGTTACCCTATTAACGGCAGATTAGGATAAGTTAACTGAAGAAAAAGAAGAGAGAATAAGATAGGAATTAAGTTTG GAGATAGAATAAGTTGCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MVDFIFQNKCQIDGMDPFKWALDNNYCINGKNPIEYAVHKNFLIDKMNPIIWAQQNNITKIHGIDLVLSIVRSGYEIEGK DAVLWCIDNKVKINGQESSEFALANGYIMVDKSYVKIENDVIKHALKHGYKIKGQDISEHIDFERDTDIIYDLQKNGFKI SGKSPVEFCIAKGMHICRTDPVDFAVQNNYQIEGKNPLAWAINNNYQIATIFGHISPMEYAVRNKVQIPLEQLGCVPDNA QLKTGIQEKHLKTYRTK
Sequences:
>Translated_257_residues MVDFIFQNKCQIDGMDPFKWALDNNYCINGKNPIEYAVHKNFLIDKMNPIIWAQQNNITKIHGIDLVLSIVRSGYEIEGK DAVLWCIDNKVKINGQESSEFALANGYIMVDKSYVKIENDVIKHALKHGYKIKGQDISEHIDFERDTDIIYDLQKNGFKI SGKSPVEFCIAKGMHICRTDPVDFAVQNNYQIEGKNPLAWAINNNYQIATIFGHISPMEYAVRNKVQIPLEQLGCVPDNA QLKTGIQEKHLKTYRTK >Mature_257_residues MVDFIFQNKCQIDGMDPFKWALDNNYCINGKNPIEYAVHKNFLIDKMNPIIWAQQNNITKIHGIDLVLSIVRSGYEIEGK DAVLWCIDNKVKINGQESSEFALANGYIMVDKSYVKIENDVIKHALKHGYKIKGQDISEHIDFERDTDIIYDLQKNGFKI SGKSPVEFCIAKGMHICRTDPVDFAVQNNYQIEGKNPLAWAINNNYQIATIFGHISPMEYAVRNKVQIPLEQLGCVPDNA QLKTGIQEKHLKTYRTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29425; Mature: 29425
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDFIFQNKCQIDGMDPFKWALDNNYCINGKNPIEYAVHKNFLIDKMNPIIWAQQNNITK CCCEEECCCCCCCCCCCEEEECCCCEEECCCCCEEEEEECCEEEECCCCEEEEECCCCEE IHGIDLVLSIVRSGYEIEGKDAVLWCIDNKVKINGQESSEFALANGYIMVDKSYVKIEND EHHHHHHHHHHHCCCEECCCCEEEEEECCEEEECCCCCCCEEEECCEEEEECCEEEEHHH VIKHALKHGYKIKGQDISEHIDFERDTDIIYDLQKNGFKISGKSPVEFCIAKGMHICRTD HHHHHHHCCEEECCCCHHHHCCCCCCCCEEEEECCCCEEECCCCHHHHHHHCCCEEEECC PVDFAVQNNYQIEGKNPLAWAINNNYQIATIFGHISPMEYAVRNKVQIPLEQLGCVPDNA CCCEEECCCEEECCCCCEEEEECCCEEEEEEEECCCCHHHHHHCCEECCHHHHCCCCCCC QLKTGIQEKHLKTYRTK HHHCCCHHHHHHHHCCC >Mature Secondary Structure MVDFIFQNKCQIDGMDPFKWALDNNYCINGKNPIEYAVHKNFLIDKMNPIIWAQQNNITK CCCEEECCCCCCCCCCCEEEECCCCEEECCCCCEEEEEECCEEEECCCCEEEEECCCCEE IHGIDLVLSIVRSGYEIEGKDAVLWCIDNKVKINGQESSEFALANGYIMVDKSYVKIEND EHHHHHHHHHHHCCCEECCCCEEEEEECCEEEECCCCCCCEEEECCEEEEECCEEEEHHH VIKHALKHGYKIKGQDISEHIDFERDTDIIYDLQKNGFKISGKSPVEFCIAKGMHICRTD HHHHHHHCCEEECCCCHHHHCCCCCCCCEEEEECCCCEEECCCCHHHHHHHCCCEEEECC PVDFAVQNNYQIEGKNPLAWAINNNYQIATIFGHISPMEYAVRNKVQIPLEQLGCVPDNA CCCEEECCCEEECCCCCEEEEECCCEEEEEEEECCCCHHHHHHCCEECCHHHHCCCCCCC QLKTGIQEKHLKTYRTK HHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA