| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is hemH [H]
Identifier: 189183423
GI number: 189183423
Start: 542061
End: 543095
Strand: Direct
Name: hemH [H]
Synonym: OTT_0516
Alternate gene names: 189183423
Gene position: 542061-543095 (Clockwise)
Preceding gene: 189183422
Following gene: 189183424
Centisome position: 26.98
GC content: 27.05
Gene sequence:
>1035_bases GTGAGTAACGAAAAAAAGATAGCAATAGTTCTACTAAACCTTGGAGGACCAGATAAAATTGAATCTGTTAAACAGTTTTT GTTTAATTTGTTTTATGATAAACATATAGTTCAACTTCCTAATCCATTTAGATTCTTAGTCGCTAAAATAATAGCATCAG TAAGAAACAAGTCTTCACAAAAAATTTATAATAAAATTGGAGGTAAATCTCCAATTTTATTTCAAACAACTTTACAAGCT GAAGCACTAAGAATTAAGCTAAAAAATAAGTTACTTCATCCATATAAGATTTTTATAGCTATGCGTTATTGGAATCCATT GATTCACGAAATAGTTTCACAAATAAAAGAATATCAACCAAGCAAAGTTATATTGTTACCACTATATCCTCAGTTTTCTA CTAGTACTACATTATCTGCAATAGAGGAATTTAAAAATAGTTTATTAAAGAATAAATTTAGTTGTTTAGTTAAAACTGTT TGTTGCTATCCAGTTAACAAAGGATTAGTAAATGGATACTCAAGTATAATAAAAAACTGCACTAATGATTTTTCTAATAC TGTTTTGTTGTTTTCTGCACATGGACTACCAAAAAAATTTATTACTCAAGGAGATCCATATCAGTGGCAAATTGAAAATT CAGTAAAGTCAATTATTAAAAAACTAAATGTAAAAGGATTACATTGGAAAATATCTTACCAAAGTAAAATAGGACCATTA AAATGGCTAGAGCCTGATACGAAATCTGAAATTATTTGTGCAGCTAAAAGTAAAAAAAATATTATAATTGTACCTATAAG TTTTGTATCTGAACATGTAGAAACTTTAGTTGAGCTTGATATAGATTACTCTAGTATTGCTAAACATTATGGAGTTAGTT ATTGCAGAGCTGAAACTGTAGGCGTAAATGATTTATTCATAAATGGAATAGCAGATATAATACTAAAAGCTATTAATAGT AATGATGACGTTATTTCAGGAAATTGTGATAAAATATGCCCACAAAAATTTATACAGTGTATATATAAAAGATAG
Upstream 100 bases:
>100_bases AACAATAGATTTATTTTTAATTTAGGTCATGGTATTCTACCAGAAACTCCAATAAAAAATGTTGAGTTAATAGTTAAACT AGTAAAAAACTACCATTCAA
Downstream 100 bases:
>100_bases GTAACAAAATGCAAAACTATTATGATTATTTTAAATCTATACATATTATATCAGTAATTTTCTGGATGGCTGGAATGTTA TATCTTCCTAGATTATATGT
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSNEKKIAIVLLNLGGPDKIESVKQFLFNLFYDKHIVQLPNPFRFLVAKIIASVRNKSSQKIYNKIGGKSPILFQTTLQA EALRIKLKNKLLHPYKIFIAMRYWNPLIHEIVSQIKEYQPSKVILLPLYPQFSTSTTLSAIEEFKNSLLKNKFSCLVKTV CCYPVNKGLVNGYSSIIKNCTNDFSNTVLLFSAHGLPKKFITQGDPYQWQIENSVKSIIKKLNVKGLHWKISYQSKIGPL KWLEPDTKSEIICAAKSKKNIIIVPISFVSEHVETLVELDIDYSSIAKHYGVSYCRAETVGVNDLFINGIADIILKAINS NDDVISGNCDKICPQKFIQCIYKR
Sequences:
>Translated_344_residues MSNEKKIAIVLLNLGGPDKIESVKQFLFNLFYDKHIVQLPNPFRFLVAKIIASVRNKSSQKIYNKIGGKSPILFQTTLQA EALRIKLKNKLLHPYKIFIAMRYWNPLIHEIVSQIKEYQPSKVILLPLYPQFSTSTTLSAIEEFKNSLLKNKFSCLVKTV CCYPVNKGLVNGYSSIIKNCTNDFSNTVLLFSAHGLPKKFITQGDPYQWQIENSVKSIIKKLNVKGLHWKISYQSKIGPL KWLEPDTKSEIICAAKSKKNIIIVPISFVSEHVETLVELDIDYSSIAKHYGVSYCRAETVGVNDLFINGIADIILKAINS NDDVISGNCDKICPQKFIQCIYKR >Mature_343_residues SNEKKIAIVLLNLGGPDKIESVKQFLFNLFYDKHIVQLPNPFRFLVAKIIASVRNKSSQKIYNKIGGKSPILFQTTLQAE ALRIKLKNKLLHPYKIFIAMRYWNPLIHEIVSQIKEYQPSKVILLPLYPQFSTSTTLSAIEEFKNSLLKNKFSCLVKTVC CYPVNKGLVNGYSSIIKNCTNDFSNTVLLFSAHGLPKKFITQGDPYQWQIENSVKSIIKKLNVKGLHWKISYQSKIGPLK WLEPDTKSEIICAAKSKKNIIIVPISFVSEHVETLVELDIDYSSIAKHYGVSYCRAETVGVNDLFINGIADIILKAINSN DDVISGNCDKICPQKFIQCIYKR
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=332, Percent_Identity=35.5421686746988, Blast_Score=175, Evalue=6e-44, Organism=Homo sapiens, GI60499021, Length=332, Percent_Identity=35.5421686746988, Blast_Score=175, Evalue=7e-44, Organism=Escherichia coli, GI1786681, Length=284, Percent_Identity=24.6478873239437, Blast_Score=91, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6324750, Length=333, Percent_Identity=32.7327327327327, Blast_Score=169, Evalue=7e-43, Organism=Drosophila melanogaster, GI17864156, Length=337, Percent_Identity=33.8278931750742, Blast_Score=177, Evalue=1e-44, Organism=Drosophila melanogaster, GI24651774, Length=261, Percent_Identity=31.8007662835249, Blast_Score=132, Evalue=3e-31, Organism=Drosophila melanogaster, GI45552018, Length=143, Percent_Identity=39.8601398601399, Blast_Score=98, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39065; Mature: 38934
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEKKIAIVLLNLGGPDKIESVKQFLFNLFYDKHIVQLPNPFRFLVAKIIASVRNKSSQ CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHCCHHH KIYNKIGGKSPILFQTTLQAEALRIKLKNKLLHPYKIFIAMRYWNPLIHEIVSQIKEYQP HHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCC SKVILLPLYPQFSTSTTLSAIEEFKNSLLKNKFSCLVKTVCCYPVNKGLVNGYSSIIKNC CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TNDFSNTVLLFSAHGLPKKFITQGDPYQWQIENSVKSIIKKLNVKGLHWKISYQSKIGPL HHHCCCEEEEEECCCCCHHHCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCC KWLEPDTKSEIICAAKSKKNIIIVPISFVSEHVETLVELDIDYSSIAKHYGVSYCRAETV CCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCC GVNDLFINGIADIILKAINSNDDVISGNCDKICPQKFIQCIYKR CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SNEKKIAIVLLNLGGPDKIESVKQFLFNLFYDKHIVQLPNPFRFLVAKIIASVRNKSSQ CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHHHCCHHH KIYNKIGGKSPILFQTTLQAEALRIKLKNKLLHPYKIFIAMRYWNPLIHEIVSQIKEYQP HHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHCCC SKVILLPLYPQFSTSTTLSAIEEFKNSLLKNKFSCLVKTVCCYPVNKGLVNGYSSIIKNC CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH TNDFSNTVLLFSAHGLPKKFITQGDPYQWQIENSVKSIIKKLNVKGLHWKISYQSKIGPL HHHCCCEEEEEECCCCCHHHCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCCCCC KWLEPDTKSEIICAAKSKKNIIIVPISFVSEHVETLVELDIDYSSIAKHYGVSYCRAETV CCCCCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCC GVNDLFINGIADIILKAINSNDDVISGNCDKICPQKFIQCIYKR CCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA