| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183377
Identifier: 189183377
GI number: 189183377
Start: 494588
End: 494962
Strand: Direct
Name: 189183377
Synonym: OTT_0470
Alternate gene names: NA
Gene position: 494588-494962 (Clockwise)
Preceding gene: 189183375
Following gene: 189183378
Centisome position: 24.62
GC content: 27.2
Gene sequence:
>375_bases ATGGCAAAAAGTTACAGTTACGATTTAAGAATGAAGCTATTCAAAGCCCTAGATGATGGACTATCAATTGTTAAAGCATG TAAAATATTCAATATAAGTCGTAATACGATATATAGATGGAAACATCTTAAAAGAGAAACAGGAGATATTAAAGCAAAAC CTTATGGACCAGCAAAAGGTTATAATGCAAAAATAGATCTCAAAGAATTTGAGGAGTTAATTATCAATCATCATGATAAA ACAGCTAAAGAATTAAGTATTATACTAGGTAATAGATTACAAAGAACTAGAATAAATTATTATAGAAAACTACTAGGATA CACTTATAAAAAAAACTCATTTTCATTCCAAAAGGGATATTGTGTTAAGAAATGA
Upstream 100 bases:
>100_bases GTTATCAATAGTTTTAGTAGCATGATGTATAGCGCTAACATAGGAAATAGGTACATAATATGCTAATATGTAAAGAGTAT AAATAATAAGAGTATAAATA
Downstream 100 bases:
>100_bases ATTTATCGAGAAGGTAAAGCAAATTTCTAAAGAAAATCTAGTATTTATTGATGAGTTAGGAATAGAGGATAATGCTTGTA GAGAATATGGATGGAGTATA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MAKSYSYDLRMKLFKALDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKIDLKEFEELIINHHDK TAKELSIILGNRLQRTRINYYRKLLGYTYKKNSFSFQKGYCVKK
Sequences:
>Translated_124_residues MAKSYSYDLRMKLFKALDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKIDLKEFEELIINHHDK TAKELSIILGNRLQRTRINYYRKLLGYTYKKNSFSFQKGYCVKK >Mature_123_residues AKSYSYDLRMKLFKALDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKGYNAKIDLKEFEELIINHHDKT AKELSIILGNRLQRTRINYYRKLLGYTYKKNSFSFQKGYCVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14663; Mature: 14532
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSYSYDLRMKLFKALDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKNSFSFQKGY CCCEECHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE CVKK ECCC >Mature Secondary Structure AKSYSYDLRMKLFKALDDGLSIVKACKIFNISRNTIYRWKHLKRETGDIKAKPYGPAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC YNAKIDLKEFEELIINHHDKTAKELSIILGNRLQRTRINYYRKLLGYTYKKNSFSFQKGY CCCEECHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCE CVKK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA