| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189183374
Identifier: 189183374
GI number: 189183374
Start: 491777
End: 492145
Strand: Direct
Name: 189183374
Synonym: OTT_0467
Alternate gene names: NA
Gene position: 491777-492145 (Clockwise)
Preceding gene: 189183373
Following gene: 189183375
Centisome position: 24.48
GC content: 29.27
Gene sequence:
>369_bases GTGTATGGATACAAAATTCAAGACTTACAAGTTACACAATTTGAGCAACCTACAACTGTTTCACAGAAACAAATCAATGA AGAAGAGTATCTCTTGAATCTCAGTAAACAATTTGACTCCAACTCAACTTGGTACAAAGTACGAGAATCTTTGATTAAAA GTTATGGTCAAACTATTGATAAAAAATACTTTAGCGAATTGAACATTATAAATGAAGATAATGTTAGTAAAAAAATATTC ATTAAAGCTAAAACAGGATTTGCTGATAGTTACATCACAAGCAACCATATGGAAAATCTTGCGCACGCTTTTAAAGCTCA AGGGTTCTCTTTTGAGTTAGTTAAGTTTAGTAATTTTAATAAAATTTAA
Upstream 100 bases:
>100_bases GTTTTGGGCCAGCAGTTCGAACTAGTTTTTTTTTAAGTTGCTTAAAAATATCACACTAACAGAATGTGATAGATCAAAGA TATTACAAGCTGTACAAGAT
Downstream 100 bases:
>100_bases AGGGTGATATGGAAAAAGATCTTGCAAAGATTGCTCCAAATAATATTCAAGCAGAGCAAATGATACTTGGAGCAATTCTG ATTAACAATCGTGCGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MYGYKIQDLQVTQFEQPTTVSQKQINEEEYLLNLSKQFDSNSTWYKVRESLIKSYGQTIDKKYFSELNIINEDNVSKKIF IKAKTGFADSYITSNHMENLAHAFKAQGFSFELVKFSNFNKI
Sequences:
>Translated_122_residues MYGYKIQDLQVTQFEQPTTVSQKQINEEEYLLNLSKQFDSNSTWYKVRESLIKSYGQTIDKKYFSELNIINEDNVSKKIF IKAKTGFADSYITSNHMENLAHAFKAQGFSFELVKFSNFNKI >Mature_122_residues MYGYKIQDLQVTQFEQPTTVSQKQINEEEYLLNLSKQFDSNSTWYKVRESLIKSYGQTIDKKYFSELNIINEDNVSKKIF IKAKTGFADSYITSNHMENLAHAFKAQGFSFELVKFSNFNKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14303; Mature: 14303
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGYKIQDLQVTQFEQPTTVSQKQINEEEYLLNLSKQFDSNSTWYKVRESLIKSYGQTID CCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KKYFSELNIINEDNVSKKIFIKAKTGFADSYITSNHMENLAHAFKAQGFSFELVKFSNFN HHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC KI CC >Mature Secondary Structure MYGYKIQDLQVTQFEQPTTVSQKQINEEEYLLNLSKQFDSNSTWYKVRESLIKSYGQTID CCCCCCCCEEEECCCCCCCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KKYFSELNIINEDNVSKKIFIKAKTGFADSYITSNHMENLAHAFKAQGFSFELVKFSNFN HHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC KI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA