Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is tatC [H]

Identifier: 189183334

GI number: 189183334

Start: 443533

End: 444300

Strand: Direct

Name: tatC [H]

Synonym: OTT_0427

Alternate gene names: 189183334

Gene position: 443533-444300 (Clockwise)

Preceding gene: 189183319

Following gene: 189183335

Centisome position: 22.08

GC content: 25.26

Gene sequence:

>768_bases
ATGCAAACTATGAACTCTAAAACTTATACACTTGGTGAACATTTAGCTGAACTTAAGGTTAGAATACTAAAAGTACTAAT
TTGTTTTTTTTTAGCTTGTGGAATAAGTTACTACTATAGCAAAAATATATATCATTTTTTGACTATTCCACTCAAAAATA
TCTTACCAGATCAGAATCATAGAATAATATATACTGGTTTAGCAGAGGGGTTTTTTACTTATTTGCAGTTGTCATTTTAT
ACAGGATTTTTAATTATTATTCCAATATTATCAGCACAAATTTATTTGTTTATTGCACCAGGATTATATAAATCTGAAAA
AATCTATTTTAAAATTTTAATGTTTATGTCGCCAATATTATTTTATATTGGAAACTTATTTGTCTTTTATTTTGTTATAC
CTAATGCGTGTCATTTTTTTTTAGGATTTGAGTCACTAAAAGAAAATGAACTTCCAATAGTCTTGGAAGCAAGAATGAGT
GAATATTTAACTTTATTAATTCAATTTAGTTTAGCATTTGGAATTTCTTTTGAATTGCCATTAATACTAATAACATTAAA
TGTATTGAATATTATTTCAATATCTACATTAATACAAAAACGAAGAATAGCTATAGTATTAAACTTTATAATAGCTGCTA
TATTAACTCCACCAGATATTCTCAGTCAGTTTGCTCTTGCAACTCCATTGATTTTGTTATATGAGGCTTCTATAATAATA
TGTAAAATTTTAAAATTGAGGACAAATGCTGGACATAAAATGGATTAG

Upstream 100 bases:

>100_bases
TCTAGAAATTATAATGAATATCATATTATAAATAATGTTTCACGTGAAACATTATTTATAAATCACTTTGTTATAATCTC
ATATACAATAGTTAAAGTTA

Downstream 100 bases:

>100_bases
AGCAAACCCAGATAAACTTGATGAATCACTAAGCAAACGAGGAATCGATTCAGTATCTAAATCAATAATACATATTGATT
CAGAAAAAAGAACATTAATA

Product: sec-independent protein translocase protein TatC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNHRIIYTGLAEGFFTYLQLSFY
TGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPILFYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMS
EYLTLLIQFSLAFGISFELPLILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII
CKILKLRTNAGHKMD

Sequences:

>Translated_255_residues
MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNHRIIYTGLAEGFFTYLQLSFY
TGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPILFYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMS
EYLTLLIQFSLAFGISFELPLILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII
CKILKLRTNAGHKMD
>Mature_255_residues
MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNHRIIYTGLAEGFFTYLQLSFY
TGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPILFYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMS
EYLTLLIQFSLAFGISFELPLILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII
CKILKLRTNAGHKMD

Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=239, Percent_Identity=33.0543933054393, Blast_Score=127, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 29296; Mature: 29296

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC
RIIYTGLAEGFFTYLQLSFYTGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPIL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH
FYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMSEYLTLLIQFSLAFGISFELP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCH
LILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CKILKLRTNAGHKMD
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC
RIIYTGLAEGFFTYLQLSFYTGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPIL
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH
FYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMSEYLTLLIQFSLAFGISFELP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCH
LILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CKILKLRTNAGHKMD
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]