| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is tatC [H]
Identifier: 189183334
GI number: 189183334
Start: 443533
End: 444300
Strand: Direct
Name: tatC [H]
Synonym: OTT_0427
Alternate gene names: 189183334
Gene position: 443533-444300 (Clockwise)
Preceding gene: 189183319
Following gene: 189183335
Centisome position: 22.08
GC content: 25.26
Gene sequence:
>768_bases ATGCAAACTATGAACTCTAAAACTTATACACTTGGTGAACATTTAGCTGAACTTAAGGTTAGAATACTAAAAGTACTAAT TTGTTTTTTTTTAGCTTGTGGAATAAGTTACTACTATAGCAAAAATATATATCATTTTTTGACTATTCCACTCAAAAATA TCTTACCAGATCAGAATCATAGAATAATATATACTGGTTTAGCAGAGGGGTTTTTTACTTATTTGCAGTTGTCATTTTAT ACAGGATTTTTAATTATTATTCCAATATTATCAGCACAAATTTATTTGTTTATTGCACCAGGATTATATAAATCTGAAAA AATCTATTTTAAAATTTTAATGTTTATGTCGCCAATATTATTTTATATTGGAAACTTATTTGTCTTTTATTTTGTTATAC CTAATGCGTGTCATTTTTTTTTAGGATTTGAGTCACTAAAAGAAAATGAACTTCCAATAGTCTTGGAAGCAAGAATGAGT GAATATTTAACTTTATTAATTCAATTTAGTTTAGCATTTGGAATTTCTTTTGAATTGCCATTAATACTAATAACATTAAA TGTATTGAATATTATTTCAATATCTACATTAATACAAAAACGAAGAATAGCTATAGTATTAAACTTTATAATAGCTGCTA TATTAACTCCACCAGATATTCTCAGTCAGTTTGCTCTTGCAACTCCATTGATTTTGTTATATGAGGCTTCTATAATAATA TGTAAAATTTTAAAATTGAGGACAAATGCTGGACATAAAATGGATTAG
Upstream 100 bases:
>100_bases TCTAGAAATTATAATGAATATCATATTATAAATAATGTTTCACGTGAAACATTATTTATAAATCACTTTGTTATAATCTC ATATACAATAGTTAAAGTTA
Downstream 100 bases:
>100_bases AGCAAACCCAGATAAACTTGATGAATCACTAAGCAAACGAGGAATCGATTCAGTATCTAAATCAATAATACATATTGATT CAGAAAAAAGAACATTAATA
Product: sec-independent protein translocase protein TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNHRIIYTGLAEGFFTYLQLSFY TGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPILFYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMS EYLTLLIQFSLAFGISFELPLILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII CKILKLRTNAGHKMD
Sequences:
>Translated_255_residues MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNHRIIYTGLAEGFFTYLQLSFY TGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPILFYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMS EYLTLLIQFSLAFGISFELPLILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII CKILKLRTNAGHKMD >Mature_255_residues MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNHRIIYTGLAEGFFTYLQLSFY TGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPILFYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMS EYLTLLIQFSLAFGISFELPLILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII CKILKLRTNAGHKMD
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=239, Percent_Identity=33.0543933054393, Blast_Score=127, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 29296; Mature: 29296
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC RIIYTGLAEGFFTYLQLSFYTGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPIL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH FYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMSEYLTLLIQFSLAFGISFELP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCH LILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH CKILKLRTNAGHKMD HHHHHHHCCCCCCCC >Mature Secondary Structure MQTMNSKTYTLGEHLAELKVRILKVLICFFLACGISYYYSKNIYHFLTIPLKNILPDQNH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCC RIIYTGLAEGFFTYLQLSFYTGFLIIIPILSAQIYLFIAPGLYKSEKIYFKILMFMSPIL EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHH FYIGNLFVFYFVIPNACHFFLGFESLKENELPIVLEARMSEYLTLLIQFSLAFGISFELP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCH LILITLNVLNIISISTLIQKRRIAIVLNFIIAAILTPPDILSQFALATPLILLYEASIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH CKILKLRTNAGHKMD HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]