Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026167
Identifier: 189026167
GI number: 189026167
Start: 1027130
End: 1028302
Strand: Reverse
Name: 189026167
Synonym: TPASS_0944
Alternate gene names: NA
Gene position: 1028302-1027130 (Counterclockwise)
Preceding gene: 189026168
Following gene: 189026166
Centisome position: 90.24
GC content: 53.2
Gene sequence:
>1173_bases ATGGCGTTGTCAGTACTGGATCGAGCGAAGAGGAAGTTTGCGCAGGAAAAGTATGGCGAGGTGATCAAACTGCTTGAGCC TTGCGTGTTGGATTATCACGAATCCTTTGTCTTTCATTTATACCTGGGGCTTGCGTGTTTGCATGAGGGAATAGTAACCG GTGCGGTTTCGTATTTGGGTCGCGCGCGGCAGATTAAGATGTCGCATCCGACGCTGTTGTGTGCGGAGGCAGCGCTGGCA CTCAAGCGGCGTGATACGAACCGTGCGGTTGAACGTTATATCGCGGTGCTCGATGCGGATCCCAAACATCGGCTTGCTCA GAAGGGTCTGAACGCGCTGAAAGCGCACCATACGCCTGAGTCGCTTGCTGGTTTTATTCAAAGTGGAAAGGTTAAGGCTT TGTATCCACGCCCTGGGGTTGCCGAATATCGGCGCCGATCTGTAGTGTGCGCGGTAGGGGTGGGATGCCTGTGTACCCTG TTAGTCGGCGCGTTGGGTATAGCAGGATTGCGTGTGTGGCACTCAGGTTTGTGGAGGGGGACTGCGCGGACTTCGCGTGC AGACGTATCGTTTTTAACGCTCACGAAGGAGGAGTACGCACGGCCGCTTGAAGGCAGCGGTTCATACCGGTATACGCTGA GTAAGCAGGATGTTTTGCAGTCGTACGCCAACGCGCAAAAATACTTTCAGACGTTCAAGGACAATGCAGCACAGGTGGAA ATAAATAAGCTGCTTGCTTCCAATGCGTCGCATTCGATTAAACGCCGGGCACGTATGCTCATGGACTATTTTGCGCTTCC GACCTTTGATACGTTTCCCGACGAAGATAATTATCCATATGTGCAGGTGCGTGAGCAAAAGGGGCTATACCTGGATTGCT GGGTGGTGTGGCAAGGGATGGCGGCGAACGTCAAACGGACGGAGCGGAGTGTGAGTTTTAATCTGCTTGTTGGGTATGAC CGACTGACAAAGCTTGAGGGGATTGTGCCGGTATTTTGTAATTTTGTGGTTTCCGTAGACCCGCAAAAACCAATTCGGGT GCTGGGGAAGGTGCAGATGCGGGGGGATATCCTGTATTTAAAGGCGCGGAGTGTTTTTCAGAGTGTACACTCCCAGTCTG GCACGGTATCAGGGGATAGGCAGGGGGCTGCGGCGGTACTTAAGGCGGGTTAG
Upstream 100 bases:
>100_bases CTTCTTGCTATGCATAGGGGTTAGTTTTTGCTGCGTGGTGCTTGCACGCGACAGTGGTTGTTCGTGCAAGTTATGGTAAT GTTTGTAAAGCAGAGCACTT
Downstream 100 bases:
>100_bases TGTTGTGGTCGATATTGGCGCTATTGTTTTGCTACGATGGAGGCTGCTATGGCGTATGAGGATCCCGCGCTGAGTGCGTA TCGACAGGTGGATGTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MALSVLDRAKRKFAQEKYGEVIKLLEPCVLDYHESFVFHLYLGLACLHEGIVTGAVSYLGRARQIKMSHPTLLCAEAALA LKRRDTNRAVERYIAVLDADPKHRLAQKGLNALKAHHTPESLAGFIQSGKVKALYPRPGVAEYRRRSVVCAVGVGCLCTL LVGALGIAGLRVWHSGLWRGTARTSRADVSFLTLTKEEYARPLEGSGSYRYTLSKQDVLQSYANAQKYFQTFKDNAAQVE INKLLASNASHSIKRRARMLMDYFALPTFDTFPDEDNYPYVQVREQKGLYLDCWVVWQGMAANVKRTERSVSFNLLVGYD RLTKLEGIVPVFCNFVVSVDPQKPIRVLGKVQMRGDILYLKARSVFQSVHSQSGTVSGDRQGAAAVLKAG
Sequences:
>Translated_390_residues MALSVLDRAKRKFAQEKYGEVIKLLEPCVLDYHESFVFHLYLGLACLHEGIVTGAVSYLGRARQIKMSHPTLLCAEAALA LKRRDTNRAVERYIAVLDADPKHRLAQKGLNALKAHHTPESLAGFIQSGKVKALYPRPGVAEYRRRSVVCAVGVGCLCTL LVGALGIAGLRVWHSGLWRGTARTSRADVSFLTLTKEEYARPLEGSGSYRYTLSKQDVLQSYANAQKYFQTFKDNAAQVE INKLLASNASHSIKRRARMLMDYFALPTFDTFPDEDNYPYVQVREQKGLYLDCWVVWQGMAANVKRTERSVSFNLLVGYD RLTKLEGIVPVFCNFVVSVDPQKPIRVLGKVQMRGDILYLKARSVFQSVHSQSGTVSGDRQGAAAVLKAG >Mature_389_residues ALSVLDRAKRKFAQEKYGEVIKLLEPCVLDYHESFVFHLYLGLACLHEGIVTGAVSYLGRARQIKMSHPTLLCAEAALAL KRRDTNRAVERYIAVLDADPKHRLAQKGLNALKAHHTPESLAGFIQSGKVKALYPRPGVAEYRRRSVVCAVGVGCLCTLL VGALGIAGLRVWHSGLWRGTARTSRADVSFLTLTKEEYARPLEGSGSYRYTLSKQDVLQSYANAQKYFQTFKDNAAQVEI NKLLASNASHSIKRRARMLMDYFALPTFDTFPDEDNYPYVQVREQKGLYLDCWVVWQGMAANVKRTERSVSFNLLVGYDR LTKLEGIVPVFCNFVVSVDPQKPIRVLGKVQMRGDILYLKARSVFQSVHSQSGTVSGDRQGAAAVLKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43480; Mature: 43349
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSVLDRAKRKFAQEKYGEVIKLLEPCVLDYHESFVFHLYLGLACLHEGIVTGAVSYLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RARQIKMSHPTLLCAEAALALKRRDTNRAVERYIAVLDADPKHRLAQKGLNALKAHHTPE CHHEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH SLAGFIQSGKVKALYPRPGVAEYRRRSVVCAVGVGCLCTLLVGALGIAGLRVWHSGLWRG HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TARTSRADVSFLTLTKEEYARPLEGSGSYRYTLSKQDVLQSYANAQKYFQTFKDNAAQVE CCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEH INKLLASNASHSIKRRARMLMDYFALPTFDTFPDEDNYPYVQVREQKGLYLDCWVVWQGM HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCH AANVKRTERSVSFNLLVGYDRLTKLEGIVPVFCNFVVSVDPQKPIRVLGKVQMRGDILYL HHHHHHHHHCEEEEEEECHHHHHHHHCHHHHHHHHHEECCCCCHHHHHHHHEECCCEEEE KARSVFQSVHSQSGTVSGDRQGAAAVLKAG HHHHHHHHHHHCCCCCCCCCCCCCCEEECC >Mature Secondary Structure ALSVLDRAKRKFAQEKYGEVIKLLEPCVLDYHESFVFHLYLGLACLHEGIVTGAVSYLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RARQIKMSHPTLLCAEAALALKRRDTNRAVERYIAVLDADPKHRLAQKGLNALKAHHTPE CHHEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHH SLAGFIQSGKVKALYPRPGVAEYRRRSVVCAVGVGCLCTLLVGALGIAGLRVWHSGLWRG HHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TARTSRADVSFLTLTKEEYARPLEGSGSYRYTLSKQDVLQSYANAQKYFQTFKDNAAQVE CCCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEH INKLLASNASHSIKRRARMLMDYFALPTFDTFPDEDNYPYVQVREQKGLYLDCWVVWQGM HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCH AANVKRTERSVSFNLLVGYDRLTKLEGIVPVFCNFVVSVDPQKPIRVLGKVQMRGDILYL HHHHHHHHHCEEEEEEECHHHHHHHHCHHHHHHHHHEECCCCCHHHHHHHHEECCCEEEE KARSVFQSVHSQSGTVSGDRQGAAAVLKAG HHHHHHHHHHHCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA