Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026155
Identifier: 189026155
GI number: 189026155
Start: 1014841
End: 1014933
Strand: Reverse
Name: 189026155
Synonym: TPASS_0932
Alternate gene names: NA
Gene position: 1014933-1014841 (Counterclockwise)
Preceding gene: 189026156
Following gene: 189026154
Centisome position: 89.07
GC content: 53.76
Gene sequence:
>93_bases ATGCCGGTGTGCACATCGCGTAGCTTACAGGGTGGAAAGGTAGATACTCACTTTCCCCTGCATGTGCTACACTCCGTCGC CTGTGATGTGTGA
Upstream 100 bases:
>100_bases TTATGCGCACACCGTGCAACCGTATGATGAAGAACGTACGGCGCGTGAATTATTACGTGCCAGCTTATCCTCTGACACCT TACTATCCTAGTTCGTCTGG
Downstream 100 bases:
>100_bases GGAGATGCGGTGAATAAGCGAGACTTTCCCAGGATTCATTTTTATGATCAGGATTTTGTTGACATCTATGATCGCACGTG GGCTTGGATAAAGGAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 29
Protein sequence:
>30_residues MPVCTSRSLQGGKVDTHFPLHVLHSVACDV
Sequences:
>Translated_30_residues MPVCTSRSLQGGKVDTHFPLHVLHSVACDV >Mature_29_residues PVCTSRSLQGGKVDTHFPLHVLHSVACDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y932_TREPA (O83902)
Other databases:
- EMBL: AE000520 - PIR: E71264 - RefSeq: NP_219368.1 - ProteinModelPortal: O83902 - IntAct: O83902 - GeneID: 2611230 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0932 - NMPDR: fig|243276.1.peg.926 - TIGR: TP_0932 - HOGENOM: HBG251092 - ProtClustDB: CLSK2300337 - BioCyc: TPAL243276:TP_0932-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3235; Mature: 3104
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVCTSRSLQGGKVDTHFPLHVLHSVACDV CCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure PVCTSRSLQGGKVDTHFPLHVLHSVACDV CCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876