Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189026145
Identifier: 189026145
GI number: 189026145
Start: 1002166
End: 1003059
Strand: Reverse
Name: 189026145
Synonym: TPASS_0922
Alternate gene names: NA
Gene position: 1003059-1002166 (Counterclockwise)
Preceding gene: 189026146
Following gene: 189026142
Centisome position: 88.03
GC content: 65.29
Gene sequence:
>894_bases GTGCCGCCGTCACCGTGCGCGGTCCTGCGGGTACGTCATACCAAACCAGCGCGCGCTGCTGGGGTAGCAGCGCACCGTTC CTTTTCCCTGTGCAATGAGGCTGTTTACCGCCGCGGGCAAAAGGTATTCCCGCTCGTGCTGCGGCGCGCGGCGCGCTTCT TGCACGAATGTCTGCCAGCACGCTGCGAGGTGTTCGAACACGCGCGGAGTGAAGCCAAAAAAGTTCATAGACGCTACTTC CTGCCCGGTGAGTGTGCAGGGCGCGCGTGCCGCGTGTGGCGGGCAGTCTTCCGCGCGCTGTGSGGTAATGACCCGTCTGC CGCCGTGCGCGTGCCAGCCGATGTGCGTGTGTTCGTGTATGGCACGCACCAGGCGTCCTGCGGCGGGGACTGCGGGGGTG GGGGGAGAGACTGCGGCGTCAGCGTCCGCAAAGGTGCAGATACCGCGCGAAACGCCACCGGTTTCGCTGAGCGTGTGCAC AAGGGGGTAGCCGACCATGGCGTGGCGTGTCGAGTCCAGCCCCTGCGCGGCAAGGTGCGCGGCAAGCGTTTTGTACGCGT CGCGTCCGTAGTAGTCATCAGCGTTGATAACCGCAAACGGTGCAGTCAGCTGTGTGCGTGCGCACAGCAACGCGTGCGCC GTCCCCCACGGCGTGCGCCGCGCAGGATGCGGCAGAGCGGCGCCGTGTGCCCCTGCTTCCTGTGCAGAGAGGGACTGAAA CACGTACTGCGCATCGCAGTGCTGCGCGAGGTGGTCAAACAGGCGCGTGCGAAAGTCGCGCTCTATATCATGCCGAATAA TACACAACACGCGGGAAAACCCGGCGCGCAGCATCGTACACGGCGTAGTCCACCAGCGTTTCGCCGTGCGGACCGACTGC GGCAATCTGCTTGA
Upstream 100 bases:
>100_bases GGGAGCTACGCGCTTCCATTGGGTACGTTATCAACACGAAGCTGAGAGTCGGGCGACCATAGCGGGGCAGGGTACCAGCC TGCTGCGATCGCGCGGGCAA
Downstream 100 bases:
>100_bases CACTTCCGTAGCGGCTGCCGAGACCTGCAGCCAGAATAACTAGCGTGAGCGTTTCGCTCATAGAAGTCTTCTAGCAAAAC GGAGCACGCCCCCGGCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPPSPCAVLRVRHTKPARAAGVAAHRSFSLCNEAVYRRGQKVFPLVLRRAARFLHECLPARCEVFEHARSEAKKVHRRYF LPGECAGRACRVWRAVFRALXGNDPSAAVRVPADVRVFVYGTHQASCGGDCGGGGRDCGVSVRKGADTARNATGFAERVH KGVADHGVACRVQPLRGKVRGKRFVRVASVVVISVDNRKRCSQLCACAQQRVRRPPRRAPRRMRQSGAVCPCFLCREGLK HVLRIAVLREVVKQARAKVALYIMPNNTQHAGKPGAQHRTRRSPPAFRRADRLRQSA
Sequences:
>Translated_297_residues MPPSPCAVLRVRHTKPARAAGVAAHRSFSLCNEAVYRRGQKVFPLVLRRAARFLHECLPARCEVFEHARSEAKKVHRRYF LPGECAGRACRVWRAVFRALXGNDPSAAVRVPADVRVFVYGTHQASCGGDCGGGGRDCGVSVRKGADTARNATGFAERVH KGVADHGVACRVQPLRGKVRGKRFVRVASVVVISVDNRKRCSQLCACAQQRVRRPPRRAPRRMRQSGAVCPCFLCREGLK HVLRIAVLREVVKQARAKVALYIMPNNTQHAGKPGAQHRTRRSPPAFRRADRLRQSA >Mature_296_residues PPSPCAVLRVRHTKPARAAGVAAHRSFSLCNEAVYRRGQKVFPLVLRRAARFLHECLPARCEVFEHARSEAKKVHRRYFL PGECAGRACRVWRAVFRALXGNDPSAAVRVPADVRVFVYGTHQASCGGDCGGGGRDCGVSVRKGADTARNATGFAERVHK GVADHGVACRVQPLRGKVRGKRFVRVASVVVISVDNRKRCSQLCACAQQRVRRPPRRAPRRMRQSGAVCPCFLCREGLKH VLRIAVLREVVKQARAKVALYIMPNNTQHAGKPGAQHRTRRSPPAFRRADRLRQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y922_TREPA (O83892)
Other databases:
- EMBL: AE000520 - PIR: G71265 - RefSeq: NP_219357.1 - ProteinModelPortal: O83892 - GeneID: 2611491 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0922 - NMPDR: fig|243276.1.peg.916 - TIGR: TP_0922 - HOGENOM: HBG732165 - ProtClustDB: CLSK2300334 - BioCyc: TPAL243276:TP_0922-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32844; Mature: 32713
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSPCAVLRVRHTKPARAAGVAAHRSFSLCNEAVYRRGQKVFPLVLRRAARFLHECLPA CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RCEVFEHARSEAKKVHRRYFLPGECAGRACRVWRAVFRALXGNDPSAAVRVPADVRVFVY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEE GTHQASCGGDCGGGGRDCGVSVRKGADTARNATGFAERVHKGVADHGVACRVQPLRGKVR ECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH GKRFVRVASVVVISVDNRKRCSQLCACAQQRVRRPPRRAPRRMRQSGAVCPCFLCREGLK HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH HVLRIAVLREVVKQARAKVALYIMPNNTQHAGKPGAQHRTRRSPPAFRRADRLRQSA HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure PPSPCAVLRVRHTKPARAAGVAAHRSFSLCNEAVYRRGQKVFPLVLRRAARFLHECLPA CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RCEVFEHARSEAKKVHRRYFLPGECAGRACRVWRAVFRALXGNDPSAAVRVPADVRVFVY HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEEE GTHQASCGGDCGGGGRDCGVSVRKGADTARNATGFAERVHKGVADHGVACRVQPLRGKVR ECCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH GKRFVRVASVVVISVDNRKRCSQLCACAQQRVRRPPRRAPRRMRQSGAVCPCFLCREGLK HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH HVLRIAVLREVVKQARAKVALYIMPNNTQHAGKPGAQHRTRRSPPAFRRADRLRQSA HHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876