Click here to switch to the map view.

The map label for this gene is 189026081

Identifier: 189026081

GI number: 189026081

Start: 935549

End: 935869

Strand: Reverse

Name: 189026081

Synonym: TPASS_0857

Alternate gene names: NA

Gene position: 935869-935549 (Counterclockwise)

Preceding gene: 189026085

Following gene: 189026079

Centisome position: 82.13

GC content: 64.49

Gene sequence:

>321_bases
TTGGCAAGCGGAGCACCGCCGCTCACCCAGAAAACCCCGTCGCACGCGCGGAGAAAAGAAAGGCGGCGCCCCTGGGCAGC
CGCCTTTGGCAATCACGCAGCGCTGGCGCCGCGCGCTTTACTTGCGTCCGAGCAGGATAGAGGCACCGAGCGACATGTTG
TGCGGCGTGCCCTGTTGCTCATCGCCTGTGGAGTCGTAGCGGTACGACGCACTCACCTGGAAGCACGCGACGCGTATTTC
GGCGCCCACGCCTGCGCGCACCTTTCCATTTGCGTTCACGGCGACTCCCGAAAGCAAGGTGAGGAAGCGAACCGGGTCTA
A

Upstream 100 bases:

>100_bases
ATAGTGGAGCTTCCCAACGCCAGCGCGCACAGGAGCGCTCCGCACCTATGCGTAAATGTATGTCTGATCATGGTGCCCAT
TGTAATGCACGCGCGCGCAG

Downstream 100 bases:

>100_bases
TATCATCCCAAGCGCATAGGAAGAGCGCTTCCAGAGTGGTCCACCTGCAGGTTGCTTACGTTCACGCGGGTGGCCACACC
CACGCTAAAGAGGAACCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MASGAPPLTQKTPSHARRKERRRPWAAAFGNHAALAPRALLASEQDRGTERHVVRRALLLIACGVVAVRRTHLEARDAYF
GAHACAHLSICVHGDSRKQGEEANRV

Sequences:

>Translated_106_residues
MASGAPPLTQKTPSHARRKERRRPWAAAFGNHAALAPRALLASEQDRGTERHVVRRALLLIACGVVAVRRTHLEARDAYF
GAHACAHLSICVHGDSRKQGEEANRV
>Mature_105_residues
ASGAPPLTQKTPSHARRKERRRPWAAAFGNHAALAPRALLASEQDRGTERHVVRRALLLIACGVVAVRRTHLEARDAYFG
AHACAHLSICVHGDSRKQGEEANRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y857_TREPA (O83829)

Other databases:

- EMBL:   AE000520
- PIR:   A71272
- RefSeq:   NP_219293.1
- ProteinModelPortal:   O83829
- GeneID:   2611060
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0857
- NMPDR:   fig|243276.1.peg.852
- TIGR:   TP_0857
- HOGENOM:   HBG732132
- ProtClustDB:   CLSK2300315
- BioCyc:   TPAL243276:TP_0857-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11607; Mature: 11476

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASGAPPLTQKTPSHARRKERRRPWAAAFGNHAALAPRALLASEQDRGTERHVVRRALLL
CCCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
IACGVVAVRRTHLEARDAYFGAHACAHLSICVHGDSRKQGEEANRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
ASGAPPLTQKTPSHARRKERRRPWAAAFGNHAALAPRALLASEQDRGTERHVVRRALLL
CCCCCCCCCCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
IACGVVAVRRTHLEARDAYFGAHACAHLSICVHGDSRKQGEEANRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876