Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is ylxH2 [H]
Identifier: 189026077
GI number: 189026077
Start: 925241
End: 926377
Strand: Reverse
Name: ylxH2 [H]
Synonym: TPASS_0853
Alternate gene names: 189026077
Gene position: 926377-925241 (Counterclockwise)
Preceding gene: 189026078
Following gene: 189026076
Centisome position: 81.3
GC content: 46.97
Gene sequence:
>1137_bases ATGCAGATTATACCCATTGCGAGTGGAAAGGGTGGGGTTGGCAAGAGTTTGCTTGCGGCAAATTTGTCCATAGCGCTCGG TCAAGCGGGGAAGAAGGTAGTAGTAGCGGATTTAGATCTTGGCGCGTCGAATTTGCATCTGGCGCTTGGCCAAAAGGGAA ATAAGCACGGAGTGGGAACATTCCTTATGGGTGCCTCTTCTTTTGAAGAGATTATGGTGCCAACTGGATATCCCAATGTA TATCTTGTGCCAGGAGATTCTGAGATACCTGGCTTTGCTGCATTGAAGGTTTCTCAGCGGCGGGCTCTAACAGTGGGTTT GTTAAAAACGCATGCTGATTATGTGGTGCTGGATTTGGGGGCAGGCACTCATCTTGGAGTGCTTGAGTTTTTTCTCCTTT CTTCACGAGGGATTATCGTTACTGAGCCTGCAGTTTCTGCGGTTTTGAATGCCTACCTTTTTCTAAAAAATGTGGTGTTC AAAATGTTGTGCGCTGCCTTTAAGAAAGGGACTGGGGGAAGTATTTTTTTAGAGAATCTCAAGTCTGATGCTGCGGCGGT ACAGCGCATGTATGTGCCTAAGATTCTTGCTGAGCTTGAGCGTGTGGATCAGCGGGGAGTTGCAGTACTTCTGGATCGGA TGCGGTCTTTTAGGCCGAGACTAGTCATGAACATGATTGCAGATCCGAAGGATGTGGATAAGGCGTTAAAGATTCGCCGC TCGTGTGAGCAGTATCTGAATATTACGCTTGAGTACCTTGGGGTCATATACCAGGATACGCAGCAGAATGTCGCGCTCTC CTCTGGTCTTCCCATTGTTGTGTACAAACCGCAGTCACTGATTGCCCAGGCAGTGTACCGGATTGCCGATAAGATTTTGC AGTCAGAGGGTGAGGAGGCGTCTTCCATTGAGGATTATGAAGGGTTGGTGGAACGAAGTTTTGCCTCTGCAGAAGCAGAA GCAGAAGTGGATTTCCAGTTTCGTATGGACTATCTTGAGGATTTGATAAAAAGCAAAACAGTGTGTGTGGGAGATCTTGC TGAGATCATAAAAGCTCAGCAGTATGAAATTGCTACTCTGAGGAAGCAAAATCTGCTCCTCCAAAGGAAAATAAATAAGA CATTGCGCAATGCGTGA
Upstream 100 bases:
>100_bases CGACCAATACGATGATCTCACTATCTTGGGAATAAGAAAGAGATAGTGCCGCTGTTGTGCAGGTTATTGCATGGTGTGTG GGTTGTGACAAGGAGACGCA
Downstream 100 bases:
>100_bases ACTTCATGAGGGTGGGGTATAACCCCTATTTGTGGGGGTGTTTTTGGGAGAATACAGTTTACGCGGAGCGTGGTGAATGG TGACAGGATAAACGGAAAAC
Product: ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MQIIPIASGKGGVGKSLLAANLSIALGQAGKKVVVADLDLGASNLHLALGQKGNKHGVGTFLMGASSFEEIMVPTGYPNV YLVPGDSEIPGFAALKVSQRRALTVGLLKTHADYVVLDLGAGTHLGVLEFFLLSSRGIIVTEPAVSAVLNAYLFLKNVVF KMLCAAFKKGTGGSIFLENLKSDAAAVQRMYVPKILAELERVDQRGVAVLLDRMRSFRPRLVMNMIADPKDVDKALKIRR SCEQYLNITLEYLGVIYQDTQQNVALSSGLPIVVYKPQSLIAQAVYRIADKILQSEGEEASSIEDYEGLVERSFASAEAE AEVDFQFRMDYLEDLIKSKTVCVGDLAEIIKAQQYEIATLRKQNLLLQRKINKTLRNA
Sequences:
>Translated_378_residues MQIIPIASGKGGVGKSLLAANLSIALGQAGKKVVVADLDLGASNLHLALGQKGNKHGVGTFLMGASSFEEIMVPTGYPNV YLVPGDSEIPGFAALKVSQRRALTVGLLKTHADYVVLDLGAGTHLGVLEFFLLSSRGIIVTEPAVSAVLNAYLFLKNVVF KMLCAAFKKGTGGSIFLENLKSDAAAVQRMYVPKILAELERVDQRGVAVLLDRMRSFRPRLVMNMIADPKDVDKALKIRR SCEQYLNITLEYLGVIYQDTQQNVALSSGLPIVVYKPQSLIAQAVYRIADKILQSEGEEASSIEDYEGLVERSFASAEAE AEVDFQFRMDYLEDLIKSKTVCVGDLAEIIKAQQYEIATLRKQNLLLQRKINKTLRNA >Mature_378_residues MQIIPIASGKGGVGKSLLAANLSIALGQAGKKVVVADLDLGASNLHLALGQKGNKHGVGTFLMGASSFEEIMVPTGYPNV YLVPGDSEIPGFAALKVSQRRALTVGLLKTHADYVVLDLGAGTHLGVLEFFLLSSRGIIVTEPAVSAVLNAYLFLKNVVF KMLCAAFKKGTGGSIFLENLKSDAAAVQRMYVPKILAELERVDQRGVAVLLDRMRSFRPRLVMNMIADPKDVDKALKIRR SCEQYLNITLEYLGVIYQDTQQNVALSSGLPIVVYKPQSLIAQAVYRIADKILQSEGEEASSIEDYEGLVERSFASAEAE AEVDFQFRMDYLEDLIKSKTVCVGDLAEIIKAQQYEIATLRKQNLLLQRKINKTLRNA
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG0455
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787423, Length=160, Percent_Identity=30.625, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 41239; Mature: 41239
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIIPIASGKGGVGKSLLAANLSIALGQAGKKVVVADLDLGASNLHLALGQKGNKHGVGT CEEEEECCCCCCCCHHHHHHHHHHEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC FLMGASSFEEIMVPTGYPNVYLVPGDSEIPGFAALKVSQRRALTVGLLKTHADYVVLDLG EEECCCCHHHEECCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECC AGTHLGVLEFFLLSSRGIIVTEPAVSAVLNAYLFLKNVVFKMLCAAFKKGTGGSIFLENL CCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KSDAAAVQRMYVPKILAELERVDQRGVAVLLDRMRSFRPRLVMNMIADPKDVDKALKIRR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHH SCEQYLNITLEYLGVIYQDTQQNVALSSGLPIVVYKPQSLIAQAVYRIADKILQSEGEEA HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCC SSIEDYEGLVERSFASAEAEAEVDFQFRMDYLEDLIKSKTVCVGDLAEIIKAQQYEIATL CCHHHHHHHHHHHHHCCCCCCEEHHEEHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH RKQNLLLQRKINKTLRNA HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQIIPIASGKGGVGKSLLAANLSIALGQAGKKVVVADLDLGASNLHLALGQKGNKHGVGT CEEEEECCCCCCCCHHHHHHHHHHEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC FLMGASSFEEIMVPTGYPNVYLVPGDSEIPGFAALKVSQRRALTVGLLKTHADYVVLDLG EEECCCCHHHEECCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECC AGTHLGVLEFFLLSSRGIIVTEPAVSAVLNAYLFLKNVVFKMLCAAFKKGTGGSIFLENL CCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KSDAAAVQRMYVPKILAELERVDQRGVAVLLDRMRSFRPRLVMNMIADPKDVDKALKIRR HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHH SCEQYLNITLEYLGVIYQDTQQNVALSSGLPIVVYKPQSLIAQAVYRIADKILQSEGEEA HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCC SSIEDYEGLVERSFASAEAEAEVDFQFRMDYLEDLIKSKTVCVGDLAEIIKAQQYEIATL CCHHHHHHHHHHHHHCCCCCCEEHHEEHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH RKQNLLLQRKINKTLRNA HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7987014; 9384377 [H]